Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001260-TA|BGIBMGA001260-PA|undefined
(110 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-761|AAF46051.1| 95|Drosophila melanogaster CG17761-PA... 64 4e-11
BT023121-1|AAY55537.1| 94|Drosophila melanogaster IP03637p pro... 62 2e-10
AY094952-1|AAM11305.1| 769|Drosophila melanogaster RH69145p pro... 31 0.32
AF017777-8|AAC28404.1| 769|Drosophila melanogaster bobby sox pr... 31 0.32
AE014298-3129|AAN09678.1| 769|Drosophila melanogaster CG1414-PC... 31 0.32
AE014298-3128|AAF50823.1| 769|Drosophila melanogaster CG1414-PB... 31 0.32
BT011016-1|AAR30176.1| 303|Drosophila melanogaster RH61816p pro... 28 2.3
AY071111-1|AAL48733.1| 168|Drosophila melanogaster RE16668p pro... 28 2.3
AE014298-371|AAF45762.1| 303|Drosophila melanogaster CG3091-PA,... 28 2.3
AY069471-1|AAL39616.1| 557|Drosophila melanogaster LD21347p pro... 26 9.2
AY058444-1|AAL13673.1| 813|Drosophila melanogaster GH22790p pro... 26 9.2
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 26 9.2
AE014297-875|AAF54336.1| 557|Drosophila melanogaster CG18005-PA... 26 9.2
AE013599-1347|AAF58619.2| 813|Drosophila melanogaster CG8991-PA... 26 9.2
>AE014298-761|AAF46051.1| 95|Drosophila melanogaster CG17761-PA
protein.
Length = 95
Score = 64.1 bits (149), Expect = 4e-11
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 1 MQRCPYIHEMKERLLGAPVEV--PDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHT 58
MQRCPYIHEM+ERLL P E + E + +R + QVGT+VKL DGY HT
Sbjct: 1 MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQVGTVVKLQGDGY--HT 58
Query: 59 SPA--RAPLV 66
SPA R PLV
Sbjct: 59 SPAHQRTPLV 68
>BT023121-1|AAY55537.1| 94|Drosophila melanogaster IP03637p
protein.
Length = 94
Score = 62.1 bits (144), Expect = 2e-10
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 2 QRCPYIHEMKERLLGAPVEV--PDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTS 59
QRCPYIHEM+ERLL P E + E + +R + QVGT+VKL DGY HTS
Sbjct: 1 QRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQVGTVVKLQGDGY--HTS 58
Query: 60 PA--RAPLV 66
PA R PLV
Sbjct: 59 PAHQRTPLV 67
>AY094952-1|AAM11305.1| 769|Drosophila melanogaster RH69145p
protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 19 VEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSP 60
V++P Q+E+ + R+ A +H + V T+ + D Y P
Sbjct: 238 VQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEP 279
>AF017777-8|AAC28404.1| 769|Drosophila melanogaster bobby sox
protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 19 VEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSP 60
V++P Q+E+ + R+ A +H + V T+ + D Y P
Sbjct: 238 VQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEP 279
>AE014298-3129|AAN09678.1| 769|Drosophila melanogaster CG1414-PC,
isoform C protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 19 VEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSP 60
V++P Q+E+ + R+ A +H + V T+ + D Y P
Sbjct: 238 VQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEP 279
>AE014298-3128|AAF50823.1| 769|Drosophila melanogaster CG1414-PB,
isoform B protein.
Length = 769
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 19 VEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSP 60
V++P Q+E+ + R+ A +H + V T+ + D Y P
Sbjct: 238 VQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEP 279
>BT011016-1|AAR30176.1| 303|Drosophila melanogaster RH61816p
protein.
Length = 303
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 5 PYIHEMKERLLGAPVEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGS 56
P++ E ++ E D +EVPRD P+ + GT+ +L + G S
Sbjct: 226 PFLREEVRNMIRYHTEGMDSL-YKEVPRDMLPNEYGGKAGTVAELKAKGIQS 276
>AY071111-1|AAL48733.1| 168|Drosophila melanogaster RE16668p
protein.
Length = 168
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 5 PYIHEMKERLLGAPVEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGS 56
P++ E ++ E D +EVPRD P+ + GT+ +L + G S
Sbjct: 91 PFLREEVRNMIRYHTEGMDSL-YKEVPRDMLPNEYGGKAGTVAELKAKGIQS 141
>AE014298-371|AAF45762.1| 303|Drosophila melanogaster CG3091-PA,
isoform A protein.
Length = 303
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 5 PYIHEMKERLLGAPVEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGS 56
P++ E ++ E D +EVPRD P+ + GT+ +L + G S
Sbjct: 226 PFLREEVRNMIRYHTEGMDSL-YKEVPRDMLPNEYGGKAGTVAELKAKGIQS 276
>AY069471-1|AAL39616.1| 557|Drosophila melanogaster LD21347p
protein.
Length = 557
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 25 KEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSPARA 63
+E+ E RDRA + ++ V +++ G+GS T+ RA
Sbjct: 97 QELSEKYRDRARERRDGANPDYVNVSTPGHGSSTNAYRA 135
>AY058444-1|AAL13673.1| 813|Drosophila melanogaster GH22790p
protein.
Length = 813
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 20 EVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSPA 61
E PD +++ E ++ D +E + +I K N DG + SP+
Sbjct: 653 EKPDVEKLSEPGQELDNDQEEDEKESIPKTNPDGDTNAASPS 694
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1065
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 19 VEVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSP 60
VE D+K E R R +H +++ ++N Y S ++P
Sbjct: 1017 VEQIDEKHYEETNRGRKVEHYKSKFKKQKRINKSKYNSSSTP 1058
>AE014297-875|AAF54336.1| 557|Drosophila melanogaster CG18005-PA
protein.
Length = 557
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 25 KEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSPARA 63
+E+ E RDRA + ++ V +++ G+GS T+ RA
Sbjct: 97 QELSEKYRDRARERRDGANPDYVNVSTPGHGSSTNAYRA 135
>AE013599-1347|AAF58619.2| 813|Drosophila melanogaster CG8991-PA
protein.
Length = 813
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 20 EVPDQKEIREVPRDRAPDHQETQVGTIVKLNSDGYGSHTSPA 61
E PD +++ E ++ D +E + +I K N DG + SP+
Sbjct: 653 EKPDVEKLSEPGQELDNDQEEDEKESIPKTNPDGDTNAASPS 694
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.134 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,081,960
Number of Sequences: 52641
Number of extensions: 161681
Number of successful extensions: 364
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 14
length of query: 110
length of database: 24,830,863
effective HSP length: 75
effective length of query: 35
effective length of database: 20,882,788
effective search space: 730897580
effective search space used: 730897580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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