Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001259-TA|BGIBMGA001259-PA|IPR004878|Protein of unknown
function DUF270
(586 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 167 2e-41
U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical pr... 141 1e-33
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 140 3e-33
Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 139 4e-33
AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 139 4e-33
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 123 4e-28
AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical ... 120 4e-27
U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical pr... 118 2e-26
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 50 5e-06
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 29 6.9
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 9.1
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 29 9.1
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 29 9.1
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 167 bits (406), Expect = 2e-41
Identities = 129/465 (27%), Positives = 200/465 (43%), Gaps = 46/465 (9%)
Query: 134 GSFYLRMGAVAFGIGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFIF 193
GS +LR+G+V FG+ ++Y + E + NC + +L + FIFIQM+FIF
Sbjct: 198 GSLFLRLGSVVFGVTGVVYYAF---LVFLCELDPNCSALSTSLDVCA-ILFIFIQMHFIF 253
Query: 194 LNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETK------HEILTFYDPENKTIGL 247
N ++ + +VAR G MH+V NL W+ ++ E E+ P + +
Sbjct: 254 CNWKLSITGSHMVARVGTMHLVAANLWTWIRYVLMEEGVMEKEIREVFNHRPPGHNYMRS 313
Query: 248 SHRLAFQKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTLVQDASPFLF 307
+ + A S+ + H + + G EC I+G++ S +F
Sbjct: 314 NSSDSSSSAENSMEQFLGDGSHEDEHFE-KKIMPGSCQAVEC----ILGSM----SEIMF 364
Query: 308 PCTIEYSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCARAHK 367
+EYSLI AA++Y++W+NI + +G Y K H VDC++
Sbjct: 365 TSIVEYSLIAAAVMYIVWRNIGRQD--------------QGSTYVKRKHQIRVDCSKTTT 410
Query: 368 GLFFGXXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRN 427
GLF G + S A V ++ Y ++T+ L ++ +R
Sbjct: 411 GLFLGLAFLAVTFTSMVVYYGFTMMNKSQSAAFVYA-FTDMFQYVLSTIGVLTAIYQMRA 469
Query: 428 LKYDG------NRNLE-LDNILLVGAQTGMFIYGTFTIIGGHFTIEKNXXXXXXXXXXXX 480
LKY N + E LD ILL G IY ++G T EK
Sbjct: 470 LKYFNKKTKLQNSDQELLDQILLSIGLVGELIYSVAGLVG--LTGEKQWTNFSFILLFVH 527
Query: 481 XXXXCQT---MFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAESH 537
Q F+L +R E +PG++ +TFLL NLA++ +N E +A
Sbjct: 528 IFRLIQVGTQTFLLHVARSVRMGCEHREAQPGKQAITFLLTANLAIFFMNLFESEKAGVS 587
Query: 538 PVQLHFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
+ + +YG +W + PL IFYRFHS+VC EIWK Y K
Sbjct: 588 EMIIEYYGKRSWVFLVRSFSPLTIFYRFHSSVCFAEIWKNVYAAK 632
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 12 ALATTLSALYGKLLVVMGVAFPMAEVISTYIPPSFYEG---FYLYLYIGSMVFLLYMYAA 68
+L T + Y L + + +A +++ + F LY+Y GS++F YMY
Sbjct: 53 SLLTACTVFYALFLTIFSLVLELAHLLNDEESRKLNKKDIIFGLYMYGGSLLFFFYMYIV 112
Query: 69 LV 70
L+
Sbjct: 113 LL 114
>U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical
protein F45F2.7 protein.
Length = 623
Score = 141 bits (341), Expect = 1e-33
Identities = 129/470 (27%), Positives = 210/470 (44%), Gaps = 45/470 (9%)
Query: 134 GSFYLRMGAVAFG-IGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFI 192
G+ YLR+GA+ FG +GS+++ G E + E C + L+ + F F+QM+FI
Sbjct: 157 GTLYLRLGAIFFGTLGSVLW-GCEIFLCFSGE----CVHRLVVAKHIAAIIFTFLQMHFI 211
Query: 193 FLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFYDPENKTIGLSHRLA 252
N+++ ++ I+A FG+MH V NL W ++ + + + + L E + S +
Sbjct: 212 VCNSKITFHRSNILASFGMMHCVAVNLWTWFSMCLVKAQVKKLKKQKKELEYHSSSSSSS 271
Query: 253 FQKAFASLATEVPPS-------HPAAAHLRVPRGL---KGPHHIFECRRTNI---MGTLV 299
+ + E S L+ +G P+ T M ++V
Sbjct: 272 DSSSSSEEILEPESSTLLENLIEVVLEKLKPGKGTTYTSTPYPYTNSSNTTSLLRMQSMV 331
Query: 300 Q--DASPFLFPCTIEYSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHL 357
+ D S FL C +EYSLI AAI +++WK + A +E KK L
Sbjct: 332 RLGDFSSFLLTCLVEYSLIGAAICFIIWKYMG-------------ATNIEMKVDKKKKKL 378
Query: 358 YSVDCARAHKGLFFGXXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLA 417
+DC GLF G KK+ S +V + + L L+ +T LA
Sbjct: 379 -RMDCHNTTIGLFLGIFFMTAAFVTIGIYTMLYNKKKTQSADLV-IGIVNLILFCVTLLA 436
Query: 418 SLAGMFCVRNLKYDGNRNLE-LDNILLVGAQTGMFIY---GTFTIIGGHFTIEKNXXXXX 473
++ G + +R L+Y + + E +D ILL+ G IY G I+ G+ T
Sbjct: 437 TIFGAWRMRVLQYRLHAHGEVIDEILLIIGLVGELIYCSIGFDMIVNGNRTGSHVPNLPI 496
Query: 474 XXXXXXXXXXXCQTMFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSR 533
Q M+IL ASR + R +PG++ +TFL++ N+ ++ +T E +
Sbjct: 497 AVFTFRIIQVIIQAMYILIASRLRCLSEVNARTQPGKQTLTFLVLINITLFVYHTFEGMK 556
Query: 534 AE-SHPVQLHFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
+ P + + + ++S PL +FYRFHS+ CL EIWK AY K
Sbjct: 557 STYGFPALMET----KYFELLNISSPLVVFYRFHSSACLAEIWKHAYSTK 602
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 140 bits (338), Expect = 3e-33
Identities = 119/455 (26%), Positives = 203/455 (44%), Gaps = 49/455 (10%)
Query: 134 GSFYLRMGAVAFG-IGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFI 192
G+ YLR+GA+ FG +GS+++ +++ +R H + + + + F F+QM+FI
Sbjct: 126 GTMYLRVGALFFGSMGSVLWGTEILLCFFDNQR----HGIYV-VKYILAVIFTFMQMHFI 180
Query: 193 FLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFYDPENKTIGLSHRLA 252
F N+++ + + I+A+FGLMH V NL WL++ + I + K I ++ +
Sbjct: 181 FSNSKISLKRSNIIAKFGLMHSVAVNLWNWLSICL------IKSSIKHAKKEIKYTYEGS 234
Query: 253 FQKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTLVQDASPFLFPCTIE 312
+ + TE+ + GPH + R +G+ +S L C +E
Sbjct: 235 DNETKTEILTEMSYDFTTDSF--------GPHDK-QLRAIIKLGS----SSSILLTCLVE 281
Query: 313 YSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCARAHKGLFFG 372
+SLI A I +++WKN E L KK H + DC+ G+F
Sbjct: 282 FSLIAAVICFIIWKNDDSNSG-------------EALKKKKKRH-FRFDCSGTTVGIFL- 326
Query: 373 XXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRNLKYDG 432
K S A + V ++ L+ + LA + F +R L+Y
Sbjct: 327 AVAVHIISAVAVGMHGILSKSNRDSAANLLVGYTDVFLFVVALLACILAFFQMRKLQYRL 386
Query: 433 NRNLE-LDNILLVGAQTGMFIY---GTFTIIGGHFTIEKNXXXXXXXXXXXXXXXXCQTM 488
+ + E +D ILL+ G +Y G I E QT+
Sbjct: 387 HAHGEVIDEILLIVGLAGECVYSCAGMDLYINDKMIKEPASYITIVSFTLRITEVLVQTI 446
Query: 489 FILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAE-SHPVQLHFYGLW 547
FIL A+R T +PG++++TFLLV N+ ++ +T E + P++L
Sbjct: 447 FILIATRMRCYTQTNCYTEPGKQVITFLLVCNINLFIYHTFETTELNFGFPIKLPD---- 502
Query: 548 AWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
+++ + +++ P+ +FYRFHS+ CL EIWK Y K
Sbjct: 503 SYSAMLNIASPIVVFYRFHSSACLAEIWKHTYSRK 537
>Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 139 bits (337), Expect = 4e-33
Identities = 117/455 (25%), Positives = 198/455 (43%), Gaps = 34/455 (7%)
Query: 134 GSFYLRMGAVAFGIGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFIF 193
G+ YLR+GA+ FG ++ GLE E N C V +A + F FIQM+FIF
Sbjct: 155 GTLYLRLGALFFGSVGIVLFGLELFLCIE---NVACKKVAIAKM-IVAIVFTFIQMHFIF 210
Query: 194 LNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFYDPENKTIGLSHRLAF 253
N+++ V + + FG+MH++ NL W ++ K E + K + R +
Sbjct: 211 CNSKITVNSSRKIVAFGMMHLISVNLWTWFRFVL--AKQEAKAHKKAQLKQ---TFRKYY 265
Query: 254 QKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTL-VQDASPFLFPCTIE 312
+ +S + E+ +A L E + + D + FL C +E
Sbjct: 266 SSSSSSSSEEI--HELISAVLNSTLNNTPATKTMEPVASRLFALEHFGDVATFLTTCIVE 323
Query: 313 YSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCARAHKGLFFG 372
YSLI AAI++++WK+I + + + K ++ +DC+ + GLF G
Sbjct: 324 YSLIGAAIMFILWKSIGQNNHQQSNSGKRKVKM-------------RIDCSSSSTGLFAG 370
Query: 373 XXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRNLKYDG 432
+ + +V + +L+L+++ A + G++ +R+L+Y
Sbjct: 371 IIFLIGSLVSMGMYTIFESLRNSSGAQLV-FGIVDLSLFSIALGACIIGLWRMRHLQYRL 429
Query: 433 NRNLE-LDNILLVGAQTGMFIY---GTFTIIGGHFTIEKNXXXX-XXXXXXXXXXXXCQT 487
+ + E +D ILL+ G +Y G I + + Q
Sbjct: 430 HAHGEVIDEILLIIGLIGEILYCAVGIDVFITCRRSADLTVSALPAFVFVIRMIQVVVQA 489
Query: 488 MFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAESHPVQLHFYGLW 547
FIL SR + ++ KPG+EI+TFLLV+N+ ++ +T E ++
Sbjct: 490 AFILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFVFHTFEGMKSS---FGFSSKAAT 546
Query: 548 AWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
+ I + PL +FYRFHS+ CL EIWK Y K
Sbjct: 547 QYNYIIYAVGPLLVFYRFHSSACLAEIWKHTYSTK 581
>AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 139 bits (337), Expect = 4e-33
Identities = 117/455 (25%), Positives = 198/455 (43%), Gaps = 34/455 (7%)
Query: 134 GSFYLRMGAVAFGIGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFIF 193
G+ YLR+GA+ FG ++ GLE E N C V +A + F FIQM+FIF
Sbjct: 155 GTLYLRLGALFFGSVGIVLFGLELFLCIE---NVACKKVAIAKM-IVAIVFTFIQMHFIF 210
Query: 194 LNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFYDPENKTIGLSHRLAF 253
N+++ V + + FG+MH++ NL W ++ K E + K + R +
Sbjct: 211 CNSKITVNSSRKIVAFGMMHLISVNLWTWFRFVL--AKQEAKAHKKAQLKQ---TFRKYY 265
Query: 254 QKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTL-VQDASPFLFPCTIE 312
+ +S + E+ +A L E + + D + FL C +E
Sbjct: 266 SSSSSSSSEEI--HELISAVLNSTLNNTPATKTMEPVASRLFALEHFGDVATFLTTCIVE 323
Query: 313 YSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCARAHKGLFFG 372
YSLI AAI++++WK+I + + + K ++ +DC+ + GLF G
Sbjct: 324 YSLIGAAIMFILWKSIGQNNHQQSNSGKRKVKM-------------RIDCSSSSTGLFAG 370
Query: 373 XXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRNLKYDG 432
+ + +V + +L+L+++ A + G++ +R+L+Y
Sbjct: 371 IIFLIGSLVSMGMYTIFESLRNSSGAQLV-FGIVDLSLFSIALGACIIGLWRMRHLQYRL 429
Query: 433 NRNLE-LDNILLVGAQTGMFIY---GTFTIIGGHFTIEKNXXXX-XXXXXXXXXXXXCQT 487
+ + E +D ILL+ G +Y G I + + Q
Sbjct: 430 HAHGEVIDEILLIIGLIGEILYCAVGIDVFITCRRSADLTVSALPAFVFVIRMIQVVVQA 489
Query: 488 MFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAESHPVQLHFYGLW 547
FIL SR + ++ KPG+EI+TFLLV+N+ ++ +T E ++
Sbjct: 490 AFILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFVFHTFEGMKSS---FGFSSKAAT 546
Query: 548 AWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
+ I + PL +FYRFHS+ CL EIWK Y K
Sbjct: 547 QYNYIIYAVGPLLVFYRFHSSACLAEIWKHTYSTK 581
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 123 bits (296), Expect = 4e-28
Identities = 113/456 (24%), Positives = 192/456 (42%), Gaps = 41/456 (8%)
Query: 134 GSFYLRMGAVAFG-IGSMIYSGLEFGQYWELERNTNCHNVLLALTPATRMAFIFIQMYFI 192
G+ YLR+G V FG +GS+++ G E + E N + V L F ++QM+F+
Sbjct: 143 GTLYLRLGTVLFGTLGSVLW-GCEIFLCFFTETRHNIYVVKYILA----FLFTYLQMHFL 197
Query: 193 FLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFYDPENKTIGLSHRLA 252
N+++ + K+ +A FG+MH V NL VW ++ + + Y + KT+ L
Sbjct: 198 CCNSKIDLPKNNFLASFGMMHCVAVNLWVWFSLCLAKA------VYKSDKKTLKLQKAEE 251
Query: 253 FQKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTLVQDASPFLFPCTIE 312
K TE + + ++ + L A+ FL +E
Sbjct: 252 KYKKKNMTITEAVAETITTTIASIVSSESSSGFRADEKQLRSLYKL-GSAANFLLTTMVE 310
Query: 313 YSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCARAHKGLFFG 372
+SLI AA+ +++WK+ + +D A KK H+ DC G+F
Sbjct: 311 FSLIAAAVYFIVWKHEGEQTPQD--------------ARKK--HV-RFDCKSTSVGIF-A 352
Query: 373 XXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRNLKYDG 432
+ A + + E L+ + LA +R L+Y
Sbjct: 353 AIVLLIGSFISIAMHYIYNNSDMPRTADEVIGIAETVLFCVCLLAVFGAFIRMRKLQYRL 412
Query: 433 NRNLEL-DNILLVGAQTGMFIY---GTFTIIGGHFTIEKNXX-XXXXXXXXXXXXXXCQT 487
+ + ++ D ILL+ G +Y G + G Q+
Sbjct: 413 HAHGQVVDEILLIVGLAGEIVYCSTGLDLYLNGRLENTPGTSCLTVVAFVMRIVQVVVQS 472
Query: 488 MFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAE-SHPVQLHFYGL 546
+FIL ASR + + + +PG++IVTFL+V N+ ++ +T E + P ++
Sbjct: 473 VFILVASRLRSLSASNISNQPGKQIVTFLVVCNINLFIYHTFETIESNFGFPHKMSS--- 529
Query: 547 WAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKMK 582
++ + ++S PL +FYRFHS+ CL EIWK AY K
Sbjct: 530 -VYSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564
>AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical
protein D1065.1 protein.
Length = 585
Score = 120 bits (288), Expect = 4e-27
Identities = 110/456 (24%), Positives = 200/456 (43%), Gaps = 50/456 (10%)
Query: 134 GSFYLRMGAVAFG-IGSMIYSGLEFGQYWELERNTNCHNVLLALTPAT-RMAFIFIQMYF 191
G+ YLR+G + FG +G+++Y +++ +RN + +T T +AFI++QM+F
Sbjct: 146 GTMYLRIGTLFFGSMGAVLYITEILLCFFDTQRNG------IYVTKYTLAVAFIYMQMHF 199
Query: 192 IFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHE-ILTFYDPENKTIGLSHR 250
IF N+++ + +A+FGLMH V + + + ++ ++ +YD ++ + H
Sbjct: 200 IFSNSKVLLKSSNAIAKFGLMHSVAFYFDFFFKFNLYKLEYRCLMRYYDMKHSKKEMKH- 258
Query: 251 LAFQKAFASLATEVPPSHPAAAHLRVPRGLKGPHHIFECRRTNIMGTLVQDASPFLFPCT 310
A L + + A + G H + R MG+ ++ L C
Sbjct: 259 -----AEDGLKNQTATNVLAQWSYNLTTNSFGAHDK-QLRTIVKMGS----SANLLLTCL 308
Query: 311 IEYSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSV--DCARAHKG 368
+E+SLI A I +++WKN P +K P SV DC G
Sbjct: 309 VEFSLIAAVICFIIWKNDHPNPGNS----------------EKKPKKQSVRFDCNGTSVG 352
Query: 369 LFFGXXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFCVRNL 428
LF K +A + ++ ++ + A L +F +R L
Sbjct: 353 LFTAIFIHIISVVVIGLHGIYM-KDHNEKVADQLIGYTDVLMFVILLFACLLALFQMRKL 411
Query: 429 KYDGNRNLE-LDNILLVGAQTGMFIYGTFTI---IGGHFTIEKNXXXXXXXXXXXXXXXX 484
+Y + + E +D+ILL+ G +Y I +
Sbjct: 412 QYTSHVHGEVIDDILLIVGLAGECVYSCAAIDLYVNEKLMDRPVPYITMIAFSLRITEVI 471
Query: 485 CQTMFILDASRRSAKTPEQLRKKPGREIVTFLLVTNLAMWAINTLEKSRAE-SHPVQLHF 543
QT+FIL A+R ++ K+PG++++TFLL+ N+ ++ +T E + + P ++
Sbjct: 472 VQTLFILIAARM--RSSPLSNKQPGKQVITFLLICNINLFIYHTFETTESSFGFPAKVSE 529
Query: 544 YGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAY 579
+T++ ++ P+ +FYRFHS+ CL EIWK Y
Sbjct: 530 ----VYTVMLTIASPIVVFYRFHSSACLAEIWKNTY 561
>U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical
protein F14B8.7 protein.
Length = 566
Score = 118 bits (283), Expect = 2e-26
Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 305 FLFPCTIEYSLICAAILYVMWKNISKYPSKDVAAAIAKARILEGLAYKKSPHLYSVDCAR 364
F++ C +EYSLICA + +V W N+ + + + + K IL+ +DC+R
Sbjct: 281 FMYTCVVEYSLICAGVAFVFWANLERLKREQMEKKMKKRSILK------------IDCSR 328
Query: 365 AHKGLFFGXXXXXXXXXXXXXXXXXXXKKEYASLAVVEVNMCELALYAMTTLASLAGMFC 424
+GLF G K A NM + + ++T + +
Sbjct: 329 TAEGLFAGFACIIVTIIAIALFNAYSSDKNVAQWIFSCTNM---SFFLVSTFLVVFAFWR 385
Query: 425 VRNLKY--------DGNRNLELDNILLVGAQTGMFIYGTFTIIG--GHFTIEKNXXXXXX 474
+R LK+ D N L LD ILLV G I+ I+ + TI
Sbjct: 386 MRYLKFLMEDDDEEDDNAEL-LDRILLVVGLIGELIFSIGGILSFINNMTIGLPLIIFTT 444
Query: 475 XXXXXXXXXXCQTMFILDASRRSAKTPEQ--LRKKPGREIVTFLLVTNLAMWAINTLEKS 532
Q+ ++ ASR + Q LR KPG++++T LL+ N A + +N E
Sbjct: 445 NVLRLIQVTF-QSCLLMVASRLRIEESNQHMLRYKPGKQVITMLLMMNCAQFMMNVFEAQ 503
Query: 533 RAESHPVQLHFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYK 580
+A + +H YG + W I+ PL IFYRFHS+ C EIWK+ ++
Sbjct: 504 KAGINDEMIHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551
Score = 64.5 bits (150), Expect = 2e-10
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 134 GSFYLRMGAVAFGIGSMIYSGLEFGQY---WELERNTNCHNVLLALTPATRMAFIFIQMY 190
GS YLR+G V FGI ++Y L F W C +V+ + FIF+QM+
Sbjct: 141 GSLYLRLGCVVFGIIGVVYYLLIFVICLLGWSSNEG-EC-SVISDVLNVMAAVFIFVQMW 198
Query: 191 FIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQE 229
F++ N ++ +ARFGLMH+ GTNL +WL ++ E
Sbjct: 199 FVYCNGKIIFTGDGNLARFGLMHLTGTNLWMWLRYILYE 237
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 50.0 bits (114), Expect = 5e-06
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 509 GREIVTFLLVTNLAMWAINTLEKS-RAESHPVQLHFYGLWAWTIITHVSMPLAIFYRFHS 567
G++ +TFL+ N+ ++ + +E S R P ++ + + +PL +F+RFH
Sbjct: 347 GKQSITFLIALNMILFGFHAIEGSIRTYGFPTKIDDTS----KMFLKICLPLVVFFRFHC 402
Query: 568 TVCLCEIWKRAYKMKP 583
+VC EIWK Y + P
Sbjct: 403 SVCFAEIWKVYYHLIP 418
Score = 36.3 bits (80), Expect = 0.060
Identities = 11/47 (23%), Positives = 29/47 (61%)
Query: 184 FIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQET 230
F Q+ F+ +++ ++ + H+++ FGL H + NL +W ++ + ++
Sbjct: 47 FHVTQVVFVSISHRVEFHYHRMIVYFGLSHTIAVNLWIWASLCIAKS 93
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 3 YNDCLNRSDALATTLSALYGKLLVVMGVAFPMAEVISTYIPPSFYEGFYLYL 54
+ CLN + +++ L G ++V+ G P+ V+S + P+FY G L L
Sbjct: 22 FYQCLNFAMVVSSALMIWKG-MMVITGSDSPVVVVLSGSMEPAFYRGDLLLL 72
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 10 SDALATTLSALYGKLLVVMGVAFPMAEVISTYIPPSF 46
+DA L + KL + FP I TYIPP+F
Sbjct: 227 NDAFGKNLMIFFPKLTPKISQFFPQFSQIFTYIPPNF 263
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 269 PAAAHLRVPRGLKGPHHIFECRRTNI-MGTLVQDASPFLFPCTIE 312
P++ H +PR PH I + RR + + T + + S F P +++
Sbjct: 281 PSSLHSSLPRAFSPPHKISKARRRQLAVTTSLSETSAFPIPSSLK 325
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 269 PAAAHLRVPRGLKGPHHIFECRRTNI-MGTLVQDASPFLFPCTIE 312
P++ H +PR PH I + RR + + T + + S F P +++
Sbjct: 342 PSSLHSSLPRAFSPPHKISKARRRQLAVTTSLSETSAFPIPSSLK 386
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.138 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,332,422
Number of Sequences: 27539
Number of extensions: 457516
Number of successful extensions: 1231
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 30
length of query: 586
length of database: 12,573,161
effective HSP length: 85
effective length of query: 501
effective length of database: 10,232,346
effective search space: 5126405346
effective search space used: 5126405346
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -