GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001259-TA|BGIBMGA001259-PA|IPR004878|Protein of unknown
function DUF270
         (586 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ212041-1|ABB00986.1|  102|Anopheles gambiae defensin protein.        25   4.2  
DQ212039-1|ABB00984.1|  102|Anopheles gambiae defensin protein.        25   4.2  
DQ212015-1|ABB00960.1|  102|Anopheles gambiae defensin protein.        25   4.2  
DQ212013-1|ABB00958.1|  102|Anopheles gambiae defensin protein.        25   4.2  
DQ212012-1|ABB00957.1|  102|Anopheles gambiae defensin protein.        25   4.2  
DQ212011-1|ABB00956.1|  102|Anopheles gambiae defensin protein.        25   4.2  

>DQ212041-1|ABB00986.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


>DQ212039-1|ABB00984.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


>DQ212015-1|ABB00960.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


>DQ212013-1|ABB00958.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


>DQ212012-1|ABB00957.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


>DQ212011-1|ABB00956.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 179 ATRMAFIFIQMYFIFLNNEMKVYKHKIVARFGLMHMVGTNLSVWLNVLVQETKHEILTFY 238
           AT +  I + +   FLN  ++    +  A  G     G NL+  L+ L +ET H  L  Y
Sbjct: 4   ATIVCTIAVVLAATFLNGSVQAAPQEEAALGG-----GANLNTLLDELPEETHHAALENY 58

Query: 239 DPENKTIGLS 248
             +  T  L+
Sbjct: 59  RAKRATCDLA 68


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.138    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,650
Number of Sequences: 2123
Number of extensions: 19587
Number of successful extensions: 74
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 6
length of query: 586
length of database: 516,269
effective HSP length: 68
effective length of query: 518
effective length of database: 371,905
effective search space: 192646790
effective search space used: 192646790
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 50 (24.2 bits)