GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001258-TA|BGIBMGA001258-PA|IPR001388|Synaptobrevin,
IPR010908|Longin, IPR011012|Longin-like
         (219 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    28   0.25 
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.1  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 1   MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKL 60
           +P  F +V RGTV L    T     +  +   L K+P   D L Y    + FH++A +  
Sbjct: 503 LPFNFLMVRRGTVPLPARITALHLASVSSRSQLMKLPSSWDLLPYFW--FAFHWLAMSHS 560

Query: 61  VY----FCITDDKFQRSRAFLFLNEI 82
            Y    +C  + +F RS   L L+ +
Sbjct: 561 CYNPIIYCYMNARF-RSGFILVLHGV 585


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 107 GRVLATEMKHYSESRDLDNISRVHGELDELKN--IMVKNIDNMAMRGEKLELLVNKADNL 164
           GRV    +       D +   R    + E  N   ++ N   MA+  +KL  +VNK   L
Sbjct: 64  GRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTL 123

Query: 165 ATSSVSYRATSRTLQR 180
              SV  + T   + R
Sbjct: 124 IECSVDVKTTDGFMLR 139


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 134 DELKNIMVKNIDNMAMRG-EKLELLVNKADNLATSSVSYRATSRTL 178
           +EL  I+  N  N  +RG E+L   V+K D   TS + Y+  S+TL
Sbjct: 225 EELARIV--NEANRLVRGLERLNEPVDKWDTPLTSLLFYKLDSKTL 268


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,093
Number of Sequences: 2123
Number of extensions: 6113
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 3
length of query: 219
length of database: 516,269
effective HSP length: 62
effective length of query: 157
effective length of database: 384,643
effective search space: 60388951
effective search space used: 60388951
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 46 (22.6 bits)