Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001258-TA|BGIBMGA001258-PA|IPR001388|Synaptobrevin,
IPR010908|Longin, IPR011012|Longin-like
(219 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical... 58 5e-09
AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin... 58 6e-09
AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein. 58 6e-09
AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein. 58 6e-09
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF239889-1|AAF45301.1| 118|Caenorhabditis elegans synaptobrevin... 46 2e-05
Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical p... 42 3e-04
L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin r... 42 3e-04
Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 33 0.12
U80836-15|AAB37898.1| 264|Caenorhabditis elegans Hypothetical p... 28 4.5
Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical pr... 28 6.0
DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein. 28 6.0
AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transpor... 28 6.0
Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical pr... 27 7.9
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 27 7.9
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 64.5 bits (150), Expect = 6e-11
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 25 FTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKR 84
++ A+ + K+ + + G ++FHYI + + D F R AF +L++I +
Sbjct: 34 YSNQAKMLFKKLNGAPAQQSVESGPFVFHYIIVQNICALVLCDRNFPRKVAFQYLSDIGQ 93
Query: 85 RXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKN 143
+ PY EF + + + Y ++ ++ V EL ++ IMV N
Sbjct: 94 EFLNENSSRIEQVVRPYHF-LEFDKYIQQAKQRYGDTNK-HAMNTVSNELQDVTRIMVTN 151
Query: 144 IDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
I+++ RGE L +L N+A L+ S YR ++ L R
Sbjct: 152 IEDVIHRGEALNILENRASELSGMSKKYRDDAKALNR 188
>AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical
protein Y69A2AR.6 protein.
Length = 245
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/76 (31%), Positives = 49/76 (64%)
Query: 129 VHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIK 188
+ ++D+++ +M N++ + RGE+LE + N+ + L TS+ S+++T+R +QR KN+K
Sbjct: 159 IRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTSATSFKSTARRVQRHFCQKNLK 218
Query: 189 MYVILVSIAALAVYLI 204
+IL+ + + V I
Sbjct: 219 WTLILLLVVTIIVAAI 234
>AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin
related protein 1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 126 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 185
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 186 NIKMYVILVSIAALAVYLIGAMACG 210
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 126 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 185
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 186 NIKMYVILVSIAALAVYLIGAMACG 210
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 126 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 185
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 186 NIKMYVILVSIAALAVYLIGAMACG 210
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 50 YLFH-YIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGR 108
YL H Y+ + L C+TD ++Q+ A FL + I + +
Sbjct: 66 YLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGIRSDKDCSYTG 125
Query: 109 VLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSS 168
L ++ + R+ D ++RV E++E K +M I ++ RGEKL+ LV K++NL+ S
Sbjct: 126 -LKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQS 184
Query: 169 VSYRATSRTLQR 180
+ ++R + +
Sbjct: 185 KMFYTSARKMNK 196
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 124 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLF 183
+ + + ++D +K +MV N++ + RGE+L+ + +++ L +S +++ T+R +QR
Sbjct: 16 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 75
Query: 184 WKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCVG 219
N K VIL SI L V+++ + L W +G
Sbjct: 76 MLNAKWTVIL-SIVILIVFVVLLLLI--LHWTGVIG 108
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 124 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLF 183
+ + + ++D +K +MV N++ + RGE+L+ + +++ L +S +++ T+R +QR
Sbjct: 19 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 78
Query: 184 WKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCVG 219
N K VIL SI L V+++ + L W +G
Sbjct: 79 MLNAKWTVIL-SIVILIVFVVLLLLI--LHWTGVIG 111
>Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical
protein F23H12.1 protein.
Length = 118
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/70 (28%), Positives = 45/70 (64%)
Query: 132 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYV 191
+++E+ ++M N++ + R +L L ++A+ L + ++ +SRTL++ +W+NI+M +
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRMMI 99
Query: 192 ILVSIAALAV 201
I+ IA L +
Sbjct: 100 IIGLIAFLVI 109
>AF239889-1|AAF45301.1| 118|Caenorhabditis elegans
synaptobrevin-like protein protein.
Length = 118
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/70 (28%), Positives = 45/70 (64%)
Query: 132 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYV 191
+++E+ ++M N++ + R +L L ++A+ L + ++ +SRTL++ +W+NI+M +
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRMMI 99
Query: 192 ILVSIAALAV 201
I+ IA L +
Sbjct: 100 IIGLIAFLVI 109
>Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 122 DLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRS 181
D I R ELD +K IM +N+ + R KL+ LV +A L +S Y + ++R
Sbjct: 14 DDQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKRE 73
Query: 182 LFWKNIKMYVILVSIAALAVY 202
+ WK + ++++++++ +
Sbjct: 74 MSWKANSLRYGIIAVSSVSAF 94
>Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 122 DLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRS 181
D I R ELD +K IM +N+ + R KL+ LV +A L +S Y + ++R
Sbjct: 14 DDQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKRE 73
Query: 182 LFWKNIKMYVILVSIAALAVY 202
+ WK + ++++++++ +
Sbjct: 74 MSWKANSLRYGIIAVSSVSAF 94
>L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin
related protein 5 protein.
Length = 102
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 122 DLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRS 181
D I R ELD +K IM +N+ + R KL+ LV +A L +S Y + ++R
Sbjct: 14 DDQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKRE 73
Query: 182 LFWKNIKMYVILVSIAALAVY 202
+ WK + ++++++++ +
Sbjct: 74 MSWKANSLRYGIIAVSSVSAF 94
>Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical
protein T14D7.3 protein.
Length = 102
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 122 DLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRS 181
D I R EL+ +K IM +N+ + R KL+ LV +A L +S Y + ++R
Sbjct: 14 DDQKIMRTRQELNSVKIIMKENVQKIMERQGKLDDLVERAQKLEEASDVYVKCAVKIKRE 73
Query: 182 LFWKNIKMYVILVSIAALAVY 202
+ WK + ++++++++ +
Sbjct: 74 MSWKANAIRNGIIAVSSVSAF 94
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 19 ATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 53
ATC G+ T V Q + I P + ++TYS G+ + H
Sbjct: 1175 ATCSGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLH 1209
>U80836-15|AAB37898.1| 264|Caenorhabditis elegans Hypothetical
protein B0432.1 protein.
Length = 264
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 144 IDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYVILVSIAALAVYL 203
+ MA G + L+N A + Y AT T S +NIK+ + L ++ A AV
Sbjct: 96 VTRMASIGTCVLYLLNIAGGAIMAVNRYFATFITFHNSFSKRNIKLILSLSTVGA-AVCS 154
Query: 204 IGAMAC------GGLAWK 215
I +M C G AWK
Sbjct: 155 IPSMVCHRVWSWDGSAWK 172
>Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical
protein T03F7.1 protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 183 FWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 217
FW NI Y++++S AA YL + + WK+C
Sbjct: 100 FWLNI-YYIVVLSWAA--TYLYNSFTMSDVPWKNC 131
>DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 183 FWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 217
FW NI Y++++S AA YL + + WK+C
Sbjct: 100 FWLNI-YYIVVLSWAA--TYLYNSFTMSDVPWKNC 131
>AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transporter
protein protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 183 FWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 217
FW NI Y++++S AA YL + + WK+C
Sbjct: 100 FWLNI-YYIVVLSWAA--TYLYNSFTMSDVPWKNC 131
>Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 11 GTVVLAKYATCQGNFTEVAEQIL 33
G +V AK+ CQGN T +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245
>Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 11 GTVVLAKYATCQGNFTEVAEQIL 33
G +V AK+ CQGN T +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 131 GELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSS 168
G++ +N +VK++D + EK+E L NK + A++S
Sbjct: 92 GKMLRERNQLVKDVDELHEEIEKMESLYNKPADYASNS 129
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,631,757
Number of Sequences: 27539
Number of extensions: 160669
Number of successful extensions: 684
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 665
Number of HSP's gapped (non-prelim): 23
length of query: 219
length of database: 12,573,161
effective HSP length: 79
effective length of query: 140
effective length of database: 10,397,580
effective search space: 1455661200
effective search space used: 1455661200
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 58 (27.5 bits)
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