Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001258-TA|BGIBMGA001258-PA|IPR001388|Synaptobrevin,
IPR010908|Longin, IPR011012|Longin-like
(219 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 171 4e-43
At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated memb... 171 4e-43
At2g25340.1 68415.m03031 synaptobrevin family protein similar to... 169 1e-42
At4g32150.1 68417.m04573 synaptobrevin family protein similar to... 165 3e-41
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 133 1e-31
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 132 1e-31
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 132 2e-31
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 129 2e-30
At3g54300.1 68416.m06001 synaptobrevin family protein similar to... 122 3e-28
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 103 9e-23
At2g33110.1 68415.m04059 synaptobrevin family protein similar to... 97 1e-20
At1g11890.1 68414.m01371 vesicle transport protein SEC22, putati... 66 2e-11
At5g58060.1 68418.m07266 SNARE protein-related similar to SNARE ... 55 3e-08
At5g58180.1 68418.m07282 SNARE protein-related similar to SNARE ... 53 2e-07
At5g52270.1 68418.m06487 vesicle transport protein-related simil... 48 7e-06
At5g52990.1 68418.m06581 vesicle-associated membrane protein-rel... 46 3e-05
At4g27840.1 68417.m03998 expressed protein 45 4e-05
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At4g10170.2 68417.m01665 synaptobrevin-related family protein si... 33 0.20
At4g10170.1 68417.m01664 synaptobrevin-related family protein si... 33 0.20
At3g24890.1 68416.m03121 synaptobrevin-related similar to SYNAPT... 33 0.20
At1g08820.1 68414.m00982 vesicle-associated membrane family prot... 33 0.20
At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR cla... 31 0.81
At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR ... 29 3.3
At5g46410.1 68418.m05712 NLI interacting factor (NIF) family pro... 28 5.7
At5g43090.1 68418.m05260 pumilio/Puf RNA-binding domain-containi... 28 5.7
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 28 5.7
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 28 5.7
At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein heli... 28 5.7
At3g20540.1 68416.m02600 DNA-directed DNA polymerase family prot... 27 10.0
At1g72800.1 68414.m08416 nuM1-related contains similarity with n... 27 10.0
At1g53990.1 68414.m06151 GDSL-motif lipase/hydrolase family prot... 27 10.0
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 171 bits (415), Expect = 4e-43
Identities = 82/219 (37%), Positives = 132/219 (60%), Gaps = 2/219 (0%)
Query: 1 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH--DDKLTYSHGNYLFHYIAEN 58
M I++++VARGTVVLA+++ GN V +IL K+ P D++L +S Y+FH + +
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60
Query: 59 KLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYS 118
L + C+ +D F R F +L EI R YAMN EF RVL +M+ +S
Sbjct: 61 GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 119 ESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTL 178
+ +D ++RV GE+ E++++MV+NI+ + RG+++ELLV+K + SS +R S+ L
Sbjct: 121 SNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRL 180
Query: 179 QRSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 217
+R+L+ KN K+ V+L + +Y+I A CGG+ SC
Sbjct: 181 RRALWMKNAKLLVLLTCLIVFLLYIIIASFCGGITLPSC 219
>At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated
membrane protein 713 (VAMP713) identified as AtVAMP713
by Sanderfoot, A.A., et al. in Plant Physiol. 124:
1558-69 (2000); similar to Vesicle-associated membrane
protein 722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like
protein Sybl1, Mus musculus, EMBL:MMU133536
Length = 221
Score = 171 bits (415), Expect = 4e-43
Identities = 78/219 (35%), Positives = 135/219 (61%), Gaps = 2/219 (0%)
Query: 1 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDK--LTYSHGNYLFHYIAEN 58
M I+F++VARGTVVL++++ N + +++QIL K+P +D ++YS Y+FH +
Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60
Query: 59 KLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYS 118
L C+ D+ R+ F FL++I +R Y+MN EF RVL+ +M+ YS
Sbjct: 61 GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 119 ESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTL 178
+ D +SR+ GE+ +++N+M++NID + RGE+LELLV+K +N+ ++ +R +R
Sbjct: 121 NDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRY 180
Query: 179 QRSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 217
+ ++W+N+K+ + L+ + AL VY+ A C G + SC
Sbjct: 181 RTIMWWRNVKLTIALILVLALVVYIAMAFVCHGPSLPSC 219
>At2g25340.1 68415.m03031 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 169 bits (412), Expect = 1e-42
Identities = 82/219 (37%), Positives = 134/219 (61%), Gaps = 1/219 (0%)
Query: 1 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDK-LTYSHGNYLFHYIAENK 59
M IL+++VARGTVVLA+ +T N + +A+QIL KIP + D ++YS Y+FH +
Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDG 60
Query: 60 LVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSE 119
L C+ D+ R F FL +I +R YAMN EF RVL ++++YS
Sbjct: 61 LTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 120 SRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQ 179
+ D ISR+ GE+++++++M++NIDN+ RGE+LELLV+K N+ ++ +R +R
Sbjct: 121 DPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFN 180
Query: 180 RSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCV 218
+++W+N K+ ++L+ + + +Y+ A AC G SCV
Sbjct: 181 NTVWWRNCKLTLLLILVLLVIIYIGVAFACHGPTLPSCV 219
>At4g32150.1 68417.m04573 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 165 bits (400), Expect = 3e-41
Identities = 75/219 (34%), Positives = 132/219 (60%), Gaps = 1/219 (0%)
Query: 1 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIP-PHDDKLTYSHGNYLFHYIAENK 59
M IL+++VARGTVVL+++ N + +A+QIL K+P +D ++YS Y+FH +
Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDG 60
Query: 60 LVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSE 119
L C+ ++ R F FL +I +R + YAMN EF RVL+ ++ +YS
Sbjct: 61 LTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 120 SRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQ 179
+ D I+R+ GE+++++ +M++NID + RGE+LELLV+K N+ ++ +R +R +
Sbjct: 121 DPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFR 180
Query: 180 RSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCV 218
+++W+N K+ V+L+ + + +Y+ A C G SC+
Sbjct: 181 SNVWWRNCKLTVLLILLLLVIIYIAVAFLCHGPTLPSCI 219
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 133 bits (321), Expect = 1e-31
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+++S VARGTV+LA+Y +GNFT VA Q L K+P ++K TY+ + F+Y+A+N Y
Sbjct: 6 LIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTY 65
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSE-S 120
+ + R FL +K ++N EFG L M++ ++
Sbjct: 66 CVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHP 125
Query: 121 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
++ +S+V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R ++R
Sbjct: 126 EEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKR 185
Query: 181 SLFWKNIKMYVILVSIAALAVYLIGAMACGG 211
L+++N+K+ +I+ I + +I C G
Sbjct: 186 KLWFENMKIKLIVFGIIVALILIIILSVCHG 216
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 132 bits (320), Expect = 1e-31
Identities = 64/211 (30%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+++S VARGTV+L ++ +GNFT +A Q L K+P ++K TY+ + F+Y+ EN Y
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTY 65
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSESR 121
+ D R FL +K ++N EFG L M++ +
Sbjct: 66 CVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHP 125
Query: 122 D-LDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
D + +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R ++R
Sbjct: 126 DEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRR 185
Query: 181 SLFWKNIKMYVILVSIAALAVYLIGAMACGG 211
++++N+K+ +I+++I + +I CGG
Sbjct: 186 KMWFQNMKIKLIVLAIIIALILIIILSICGG 216
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 132 bits (318), Expect = 2e-31
Identities = 65/211 (30%), Positives = 117/211 (55%), Gaps = 2/211 (0%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+++S VARGTV+L +Y +GNFT VA Q L K+P ++K TY+ + F+Y+ EN Y
Sbjct: 71 LIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTY 130
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSESR 121
+ + R FL +K ++N EFG L M++ +
Sbjct: 131 CVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHP 190
Query: 122 D-LDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
D + +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R ++R
Sbjct: 191 DEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRR 250
Query: 181 SLFWKNIKMYVILVSIAALAVYLIGAMACGG 211
++++N+K+ +I++ I + +I CGG
Sbjct: 251 KMWFENMKIKLIVLGIIITLILIIILSVCGG 281
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 129 bits (311), Expect = 2e-30
Identities = 63/211 (29%), Positives = 117/211 (55%), Gaps = 2/211 (0%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+++S VARGTV+L ++ +GNFT +A Q L K+P ++K TY+ + F+Y+ E+ Y
Sbjct: 6 LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTY 65
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPY-AMNSEFGRVLATEMKHYSESR 121
+ D R FL +K ++N EFG L M++ +
Sbjct: 66 CVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHP 125
Query: 122 D-LDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
D + +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R T ++R
Sbjct: 126 DEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRR 185
Query: 181 SLFWKNIKMYVILVSIAALAVYLIGAMACGG 211
++ +N+K+ +I+++I + +I C G
Sbjct: 186 KMWLQNMKIKLIVLAIIIALILIIVLSVCHG 216
>At3g54300.1 68416.m06001 synaptobrevin family protein similar to
vesicle-associated membrane protein 7B (At VAMP7B),
Arabidopsis thaliana, EMBL:AF025333
Length = 240
Score = 122 bits (293), Expect = 3e-28
Identities = 66/235 (28%), Positives = 123/235 (52%), Gaps = 21/235 (8%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+++S VA+GTVVLA++ GNF+ +A Q L K+P + K TYS + F+++ +N V+
Sbjct: 6 LIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVF 65
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXX--------------------XIPYAM 102
+ D+ RS F+FL +K + Y +
Sbjct: 66 LVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNL 125
Query: 103 NSEFGRVLATEMKH-YSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKA 161
+ EFG +L M++ S ++ +S++ ++ E+K IM+ NI+ + RGEK+ELLV+K
Sbjct: 126 DREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKT 185
Query: 162 DNLATSSVSYRATSRTLQRSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKS 216
+NL + S++ R L+R ++ ++++M +++ + ++ +ACGG S
Sbjct: 186 ENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKCSS 240
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 103 bits (247), Expect = 9e-23
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 4 LFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDD-KLTYSHGNYLFHYIAENKLVY 62
++S VARGT++LA+Y GNF +A Q L K+P + K TY+ ++ F+++ E+ Y
Sbjct: 7 IYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDAYAY 66
Query: 63 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXX-XXXXIPYAMNSEFGRVLATEMKHYSE-S 120
+ D + + FL +K I ++N EFG V+ M + + +
Sbjct: 67 CVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHA 126
Query: 121 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRAT 174
+++ + +V ++ E+K+IM++NID RGE L +L +K +NL + + Y+ T
Sbjct: 127 EEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAREYKKT 180
>At2g33110.1 68415.m04059 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 217
Score = 96.7 bits (230), Expect = 1e-20
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 3 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+ +S +ARGTV+L ++ +GNFT VA Q L +P ++K TY+ + F+ + EN Y
Sbjct: 6 LFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTY 65
Query: 63 FCITDDKFQRSRAFLFLNEIKRR-XXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESR 121
+ D R FL +K ++N EFG L M++ +
Sbjct: 66 CVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHP 125
Query: 122 D-LDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 180
D + N+++ ++ E+K++M++NI+ + RG E+L + + ++ ++R
Sbjct: 126 DEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKR 181
Query: 181 SLFWKNIKMYVILVSIAALAVYLIGAMACGG 211
+++N+K+ +I+++I + +I CGG
Sbjct: 182 KKWFQNMKIKLIVLAIIIALILIIILSVCGG 212
>At1g11890.1 68414.m01371 vesicle transport protein SEC22, putative
identified as SEC22 by Raikhel, NV, et al. in Plant
Physiol. 124: 1558-69 (2000); similar to vesicle
trafficking protein gb|U91538 from Mus musculus; ESTs
gb|F15494 and gb|F14097 come from this gene
Length = 218
Score = 66.1 bits (154), Expect = 2e-11
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 42 KLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXI-PY 100
+++ G Y+FHYI E ++ Y + D + + AF +L ++K PY
Sbjct: 52 RMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPY 111
Query: 101 AMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNK 160
A +F + K Y ++R NI++++ EL E+ IM +N+ + GEKL+ +
Sbjct: 112 AF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEM 170
Query: 161 ADNLATSSVSYRATSRTLQRSLFWKNIKMYVILVSIAALAVYL 203
+ L + S Y ++ L R + I+ + L ++
Sbjct: 171 SSRLTSESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLLFWV 213
>At5g58060.1 68418.m07266 SNARE protein-related similar to SNARE
protein Ykt6 [Homo sapiens] GI:2507637
Length = 199
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 28 VAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXX 87
V + S+ PP + + H Y H N L DD + AF LN++
Sbjct: 45 VGRTVASRTPP-SQRQSVQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQ 103
Query: 88 XXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNM 147
+++ L + + + + D + ++ ELDE K I+ K ID++
Sbjct: 104 KSFGESWRSA--KEDSNQPWPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSV 161
Query: 148 AMRGEKLELLVNKADNLA-TSSVSYRATSRT 177
RGEKL+ LV K+ +L+ S + Y+ +T
Sbjct: 162 LARGEKLDSLVEKSSDLSMASQMFYKQAKKT 192
>At5g58180.1 68418.m07282 SNARE protein-related similar to SNARE
protein Ykt6 [Homo sapiens] GI:2507637
Length = 199
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 17 KYATCQGNFTE----VAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQR 72
K++ + NF E +A + + PP + + H Y H N L DD +
Sbjct: 32 KFSFYRSNFEEFIVFIARTVARRTPP-GQRQSVKHEEYKVHAYNINGLCAVGFMDDHYPV 90
Query: 73 SRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRDLDNISRVHGE 132
AF LN++ + +S+ L + + + D + ++ E
Sbjct: 91 RSAFSLLNQV----LDVYQKDYGDTWRFENSSQPWPYLKEASDKFRDPAEADKLLKIQRE 146
Query: 133 LDELKNIMVKNIDNMAMRGEKLELLVNKADNLA-TSSVSYRATSRT 177
LDE K I+ K ID + RGEKL+ LV K+ L+ S + Y+ +T
Sbjct: 147 LDETKIILHKTIDGVLARGEKLDSLVEKSSELSLASKMFYKQAKKT 192
>At5g52270.1 68418.m06487 vesicle transport protein-related similar
to vesicle trafficking protein sec22b [Mus musculus]
GI:1907386
Length = 214
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/123 (20%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 42 KLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXI--P 99
K+T ++ FH++ E K+ Y ++D + R F +L + + I P
Sbjct: 54 KMTILLDHHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKP 113
Query: 100 YAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVN 159
Y+ FG+++ K Y ++R N+S+++ + +++ ++++++ R + L +L +
Sbjct: 114 YSF-IRFGKIIGRIRKQYIDTRTQANLSKLNALRKQELDVVTEHLNDIIQRQQILGVLRS 172
Query: 160 KAD 162
D
Sbjct: 173 SND 175
>At5g52990.1 68418.m06581 vesicle-associated membrane
protein-related contains weak similarity to
vesicle-associated membrane protein 722 (AtVAMP722)
(Synaptobrevin- related protein 1) (Swiss-Prot:P47192)
[Arabidopsis thaliana]
Length = 272
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 5 FSIVARGTVVLAKYATCQGNFTE-VAEQILSKIPPHDDKLTYS-HGNYLFHYIAENKLVY 62
++ +A+GTVVLA++ + Q E +A + + PPH +++ H I ++ VY
Sbjct: 10 YTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTFAIDDDSFVY 69
Query: 63 FCITDDKFQRSRAFLFLNEIK 83
F I+D+ ++ +F LN ++
Sbjct: 70 FSISDESMEKPESFWVLNRLR 90
>At4g27840.1 68417.m03998 expressed protein
Length = 260
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 3 ILFSIVARGTVVLAKYATCQG-NFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 61
+ +S +A+GTV+LA++A+ + ++A + + +PPH ++++ + I +
Sbjct: 8 LFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYALIIDGLFS 67
Query: 62 YFCITDDKFQRSRAFLFLNEIK 83
YF I D+ +S + N +K
Sbjct: 68 YFAILDEVVAKSESVWLFNRLK 89
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 5 FSIVARGTVVLAKY--ATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 62
+ V+R ++ Y A N +A L K PP + G F ++ ++ VY
Sbjct: 263 YCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGFLMKDDFVY 322
Query: 63 FCITDDKFQRSRAFLFLNEIK 83
F I DD F++S FL +++
Sbjct: 323 FAIVDDVFKKSSVLDFLEKLR 343
>At4g10170.2 68417.m01665 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}; vesicle-associated membrane
protein 7B, Arabidopsis thaliana, AF025333
Length = 254
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/79 (25%), Positives = 32/79 (40%)
Query: 5 FSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFC 64
+ V+R +L Y +A L K PP + G F ++ + VYF
Sbjct: 10 YCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVYFA 69
Query: 65 ITDDKFQRSRAFLFLNEIK 83
I D+ +RS FL ++
Sbjct: 70 IVDEVLKRSSVLKFLEHLR 88
>At4g10170.1 68417.m01664 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}; vesicle-associated membrane
protein 7B, Arabidopsis thaliana, AF025333
Length = 254
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/79 (25%), Positives = 32/79 (40%)
Query: 5 FSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFC 64
+ V+R +L Y +A L K PP + G F ++ + VYF
Sbjct: 10 YCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVYFA 69
Query: 65 ITDDKFQRSRAFLFLNEIK 83
I D+ +RS FL ++
Sbjct: 70 IVDEVLKRSSVLKFLEHLR 88
>At3g24890.1 68416.m03121 synaptobrevin-related similar to
SYNAPTOBREVIN-RELATED PROTEIN GB:P47192 from
[Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A.
(1992) 89(9), 3894-3898); contains Pfam profile PF00957:
synaptobrevin
Length = 114
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/83 (20%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 122 DLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRS 181
++ +++V + ++K +M++NI+ R EK+++LV +L + + R
Sbjct: 28 EISKLAKVKALVTKMKGVMMENIEKALDRSEKIKILV----DLRSKYKDIITPGTKITRK 83
Query: 182 LFWKNIKMYVILVSIAALAVYLI 204
++++N+K +I++ ++ LI
Sbjct: 84 MWFQNMKFKLIVLGTSSSRFVLI 106
>At1g08820.1 68414.m00982 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia]
Length = 386
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 118 SESRDLDNISRVHGE----LDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRA 173
S+ RD+ + + G+ LDELK +VK+I+ M ++ + LE + +AD+ + + R+
Sbjct: 279 SKERDVVQLQKTDGQNVRGLDELK--LVKDIEEMKLKVDALESKLKQADSTISKLMEERS 336
Query: 174 TSRTLQRSL 182
S ++SL
Sbjct: 337 ISSQHRQSL 345
>At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 833
Score = 30.7 bits (66), Expect = 0.81
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 102 MNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKA 161
M + ++ + +YS SRD D + + + E+++++ + D + M G + K
Sbjct: 1 MTEKIATDVSNMLNNYSPSRDFDGLIGMDAHMKEMESLLCLDSDEVRMIGIWGPSGIGKT 60
Query: 162 DNLATSSVSYRATSRTLQRSLFWKNIK 188
+ V Y S + S+F NIK
Sbjct: 61 ---TIARVLYSQFSENFELSIFMGNIK 84
>At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 898
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 13 VVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYF 63
VV++K + E+A+++ D K Y G YL++++ + + V F
Sbjct: 209 VVVSKEVNVENILDEIAQKVHISGEKWDTKYKYQKGVYLYNFLRKMRFVLF 259
>At5g46410.1 68418.m05712 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 453
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 98 IPYA-MNSEFGRVLATEMKHYSESRDLDNISRVHGELDEL 136
+PY M S+ +VL KH + +R+ ++S++ G+L+ +
Sbjct: 1 MPYIEMKSKISKVLGVCKKHKASTRNSCSLSKISGDLESI 40
>At5g43090.1 68418.m05260 pumilio/Puf RNA-binding domain-containing
protein contains similarity to RNA-binding protein
Length = 527
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 27 EVAEQILSKIPPHDDKLTYS-HGNYLFHYIAE 57
E+ ++++S++ H KL + HGNY+ Y+ E
Sbjct: 389 EIRQRLISEVIEHALKLCLNCHGNYVVQYVVE 420
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 101 AMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNK 160
AM + ++ + + + SRD D + + L+++K ++ + D + + G + K
Sbjct: 211 AMIKKIATDISNILINSTPSRDFDGLVGMRAHLEKMKPLLCLDTDEVRIIGIWGPPGIGK 270
Query: 161 ADNLATSSVSYRATSRTLQRSLFWKNIK 188
+ V Y S + Q S+F +NIK
Sbjct: 271 T---TIARVVYNQLSHSFQLSVFMENIK 295
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 107 GRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLAT 166
G LAT + + RDL ++ V EL L + ++ + N+ E+ ++ K NL
Sbjct: 287 GNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNL---HEERTKMLGKMSNLQN 343
Query: 167 SSVSYRATS 175
S S R S
Sbjct: 344 KSKSVRCIS 352
>At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein
helicase, putative
Length = 2172
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 44 TYSHGNYLFHYIAENKLVYFCITDDKFQRSRAF 76
T++HGNY Y+A K + + D QR + F
Sbjct: 555 TFNHGNYKIVYVAPMKALVAEVVDSLSQRLKDF 587
>At3g20540.1 68416.m02600 DNA-directed DNA polymerase family protein
similar to PolI-like DNA polymerase [Oryza sativa]
GI:19912795; contains Pfam profiles PF01612: 3'-5'
exonuclease, PF00476: DNA polymerase I family A
Length = 1034
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 125 NISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNL 164
N+S+V L ++ N V+ +DN++ E + LL+N+ NL
Sbjct: 229 NLSQVRANLKKIYN-RVRVVDNVSSAKETVALLMNQYRNL 267
>At1g72800.1 68414.m08416 nuM1-related contains similarity with nuM1
GI:1279563 from [Medicago sativa]
Length = 335
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 109 VLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLA 165
V++ K S+ ++ +S V LDE K ++ + D + K++LLV KAD LA
Sbjct: 24 VISPSEKEESDQTEITKVS-VLKNLDE-KEMIKEFADRLQRLEAKVDLLVTKADLLA 78
>At1g53990.1 68414.m06151 GDSL-motif lipase/hydrolase family protein
similar to myrosinase-associated proteins from [Brassica
napus] GI:1769968 GI:1769970, SP|P40603 Anther-specific
proline-rich protein APG {Brassica napus}; contains Pfam
profile PF00657: GDSL-like Lipase/Acylhydrolase
Length = 367
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 24 NFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLN 80
NF +V + + S++ + K +S YLFH A + F F+ + F++
Sbjct: 133 NFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVD 189
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,368,780
Number of Sequences: 28952
Number of extensions: 146719
Number of successful extensions: 643
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 601
Number of HSP's gapped (non-prelim): 33
length of query: 219
length of database: 12,070,560
effective HSP length: 78
effective length of query: 141
effective length of database: 9,812,304
effective search space: 1383534864
effective search space used: 1383534864
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)
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