Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001257-TA|BGIBMGA001257-PA|IPR013027|FAD-dependent
pyridine nucleotide-disulphide oxidoreductase
(472 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 38 0.003
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 32 0.20
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 29 1.1
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 29 1.9
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 27 4.3
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 27 5.7
SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizos... 27 5.7
SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces... 27 5.7
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 7.5
SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|c... 26 9.9
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 9.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 9.9
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 273 VQLTNSQLVECDFLISATGVEPSVNFTWDKVPEKGQDGGLAVNEF-QETSIKNVFAAGDV 331
+ L + Q + D +I A GV+P++ + + V + +DGG+ V+E + ++V+A GD+
Sbjct: 380 IVLKDGQSIPADVVILAAGVKPNLRYLGNAVSLE-KDGGVKVDEHCRVLGAEDVYAVGDI 438
Query: 332 ASAAWEHAP 340
A A + P
Sbjct: 439 AHAPFAGLP 447
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 31.9 bits (69), Expect = 0.20
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 249 ELEIVYKAEVESVLEDNKNEYPLRVQLTNSQLV---ECDFLISATGVEPSVNFTWDKVPE 305
++E+++ E D K LR++ TN+ V + + L A G P+ +++ E
Sbjct: 204 KVEVLWNTVAEEAQGDGKLLNNLRIKNTNTNEVSDLQVNGLFYAIGHIPATKLVAEQI-E 262
Query: 306 KGQDGGL-AVNEFQETSIKNVFAAGDVASAAWEHA 339
+ G + +N TSI FAAGDV + A
Sbjct: 263 LDEAGYIKTINGTPRTSIPGFFAAGDVQDKVFRQA 297
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 40 TLVKNVSNVTFFAKTIVNFDVNETEATSLQKIHPNLKIIYDSLKHLDTEKQKALTDKGVH 99
TLV + + I D E + ++Q+I PNLK+I K D EK +
Sbjct: 181 TLVNPLKEIESLEVIIYRNDAKEEDIKTIQEIRPNLKLI----KFADFEKMSPPVEPDPP 236
Query: 100 IQYDVICI 107
++ CI
Sbjct: 237 SPEEICCI 244
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 219 VSLNKNLKSAALGPDWYRKLENIKSDRGVQELEIVYK-AEVESVLEDNKNEYPLRV 273
+S +L+ A G W R +N K+D + LE+V + E +++ +N N Y L V
Sbjct: 325 LSNKTSLEGARFGLPWKRLWQNAKADEIDRLLEVVKQIEEAGAIVYNNTNFYNLDV 380
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.5 bits (58), Expect = 4.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 38 ASTLVKNVSNVTFFAKTIVNFDVNE----TEATSLQK---IHPNLKIIYDSLKHLDTEKQ 90
AS V+NV N T +++ V +N+ +A++L+K + PN + LDT K
Sbjct: 164 ASLFVENVCNETIPSQSCVRLKINDKTRKVDASALEKKSCLLPNSSGTLTDQRGLDTIKH 223
Query: 91 KALTDKGV-HIQYDVI 105
K++ + H+ D +
Sbjct: 224 KSIEQNEILHVISDTL 239
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.1 bits (57), Expect = 5.7
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 196 NENERKNQNTVLRRHIYSEEDSLVSLNK-NLK-SAALGPDWYRKLENIKSDRGVQELEIV 253
N E KNQN L I + E+ +V LNK N K S AL + E ++ ++
Sbjct: 458 NLEELKNQNDYLTSQITNLEEGMVMLNKENTKLSEALSNHRVTRSEMEEATEILKNNSAD 517
Query: 254 YKAEVESVLEDNKN 267
KA++E ++ +N
Sbjct: 518 LKAQLEKQPQELEN 531
>SPAC1952.07 |rad1||checkpoint clamp complex protein
Rad1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 323
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 59 DVNETEATSLQKIHPNLKIIYDSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISD 118
D+N +T KI +YD+L LD + L + + C G + +
Sbjct: 149 DINRLASTLCTKIIMKSNWLYDALVELDNNMGENLIIHTSSQKSTFLLRCVGALSTTEIE 208
Query: 119 SKNSKRVLGIRDTESVKDFQQK 140
N K VL +T+S + +
Sbjct: 209 YPNEKSVLESFETDSENTYSYR 230
>SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 382
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 9 LIVGGGIAGVTCVETLAILHP 29
+IVGGGI GV+C+ LA HP
Sbjct: 8 VIVGGGITGVSCLYFLA-HHP 27
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 30 EKTLVLVTASTLVKNVSNVTFFAKTIVNFDVNETEATSLQKIHPNL 75
E + L S L+K+V ++ F T NF+V + + LQ H NL
Sbjct: 245 EMQIFLKGLSLLLKHVDHLYFRGLTGKNFNVADFILSGLQSDHTNL 290
>SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 129 RDTESVKDFQQKLKTGRRMVIVGNGGIASEIV 160
R+ S+K+F QKLK G R+ + ++E++
Sbjct: 92 RNEMSIKEFFQKLKNGERLYLTTQYDESNEVL 123
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 9.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 5 NTTYLIVGGGIAGVTCVETL 24
NT +++GGG+AG++ T+
Sbjct: 38 NTQAIVIGGGLAGLSATNTI 57
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 9.9
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 195 KNENERKNQNTVLRRHIYSEEDSL-VSLNKNL-----KSAALGPDWYRKLENIKSDRGVQ 248
KN+ + NQ L+ + E++SL +SL ++L K ++L D +LE++ D +
Sbjct: 1396 KNQLDHLNQEIRLKEDVLKEKESLIISLEESLSNQRQKESSL-LDAKNELEHMLDDTSRK 1454
Query: 249 ELEIVYKAE-VESVLEDNKNEYPLRVQ 274
++ K E + S L+D E V+
Sbjct: 1455 NSSLMEKIESINSSLDDKSFELASAVE 1481
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,070,676
Number of Sequences: 5004
Number of extensions: 87608
Number of successful extensions: 249
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 16
length of query: 472
length of database: 2,362,478
effective HSP length: 75
effective length of query: 397
effective length of database: 1,987,178
effective search space: 788909666
effective search space used: 788909666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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