Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001257-TA|BGIBMGA001257-PA|IPR013027|FAD-dependent
pyridine nucleotide-disulphide oxidoreductase
(472 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0324 + 22343508-22343561,22343789-22343860,22344165-223442... 50 3e-06
08_02_1564 + 27892707-27892760,27892875-27892946,27893049-278931... 44 2e-04
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 38 0.017
02_05_0462 - 29245307-29246032,29246120-29246235,29246327-292465... 33 0.65
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 32 0.86
02_01_0383 + 2776526-2776632,2777579-2777835,2777915-2778366,277... 32 1.1
02_05_0502 + 29569563-29570487,29570548-29570621 31 1.5
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 31 2.6
07_03_0365 + 17288071-17288255,17288339-17288678 30 3.5
06_02_0181 - 12694304-12694398,12694512-12695547 30 3.5
11_06_0437 - 23533218-23536382 30 4.6
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 30 4.6
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 8.0
>09_06_0324 +
22343508-22343561,22343789-22343860,22344165-22344200,
22344466-22344517,22344638-22344718,22344900-22345018,
22345114-22345333,22345507-22345625,22345717-22345842,
22346092-22346232,22346773-22347096
Length = 447
Score = 50.4 bits (115), Expect = 3e-06
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 239 ENIKSDRGVQELEIVYKAEVESVLEDNKNEYPLRVQLTNSQLVECDFLISATGVEPSVNF 298
E+ +++GV+ + K V + + N V L N ++E D ++ G P
Sbjct: 225 ESYYTNKGVK----IVKGTVAVGFDADANGDVTAVNLKNGSVLEADIVVVGVGGRPLTTL 280
Query: 299 TWDKVPEKGQDGGLAVNEFQETSIKNVFAAGDVASAAWEHAPHWFQLRLWTQARQMAGMA 358
+V E + GG+ + F ETS+ V+A GDVA+ + ++ AR+ A A
Sbjct: 281 FKGQVAE--EKGGIKTDAFFETSVPGVYAVGDVATFPMKMYNELRRVEHVDHARKSAEQA 338
Query: 359 AKAMHGRITNQEVLQDFCFELFTHCTKLFGYRVILLGKYNGQGLGTD--YEILLRTTPNV 416
KA+ G+ + + V++ + + + L ++ G +G + T+
Sbjct: 339 VKAIKGKESGESVVE------YDYLPYFYSRSFDLGWQFYGDNVGDTILFGDSDPTSAKP 392
Query: 417 EYIKFVLKEGKLQGAILIG 435
++ + +K+GK+ GA L G
Sbjct: 393 KFGSYWIKDGKVLGAFLEG 411
>08_02_1564 +
27892707-27892760,27892875-27892946,27893049-27893100,
27893225-27893305,27893768-27893886,27894102-27894321,
27894475-27894593,27894683-27894808,27894993-27895133,
27895240-27895563
Length = 435
Score = 44.4 bits (100), Expect = 2e-04
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 253 VYKAEVESVLEDNKNEYPLRVQLTNSQLVECDFLISATGVEPSVNFTWDKVPEKGQDGGL 312
+ K V + + N V+L N ++E D +I G P + +V E + GG+
Sbjct: 223 IIKGTVAVGFDADANGDVTAVKLKNGNVLEADIVIVGVGGRPLTHLFKGQVAE--EKGGI 280
Query: 313 AVNEFQETSIKNVFAAGDVASAAWEHAPHWFQLRLWTQARQMAGMAAKAMHGRITNQEVL 372
+ F ETS+ V+A DVA+ + ++ AR+ A A KA+ + + V
Sbjct: 281 KTDAFFETSVPGVYAIADVAAFPMKLYNEIRRVEHVDHARKSAEQAVKAIKAKEAGESVP 340
Query: 373 QDFCFELFTHCTKLFGYRVILLGKYNGQGLGTD--YEILLRTTPNVEYIKFVLKEGKLQG 430
+ + + + L ++ G +G D + T ++ + +K+GK+ G
Sbjct: 341 E------YDYLPYFYSRSFDLSWQFYGDNVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVG 394
Query: 431 AILIG 435
L G
Sbjct: 395 VFLEG 399
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 37.9 bits (84), Expect = 0.017
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 29/264 (10%)
Query: 75 LKIIY-DSLKHLDTEKQKALTDKGVHIQYDVICICTG-GIPRLISD-SKNSKRVLGIRDT 131
++++Y D + D + T G ++Y + I TG RL + N V IRD
Sbjct: 138 IEVLYEDPVVAFDGKTHTLKTSSGKILKYGSLIISTGCEASRLPAKIGGNLPGVHYIRDV 197
Query: 132 ESVKDFQQKLKTGRRMVIVGNGGIASEIVHATSG--IEKVWVIRDDYISATFIDPGAAEF 189
L +++V++G G I E+ A G ++ + +D+I P A+
Sbjct: 198 ADADSLVSSLGKAKKIVVIGGGYIGMEVAAAACGWNLDTTIIFPEDHIMPRLFTPSLAKK 257
Query: 190 FQETFKNENERKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQE 249
++E ++ + + ++ + + + D VS SA L +++D
Sbjct: 258 YEELYQQNGVKFIKGALIDK-LEAGSDGRVS------SAVLEDG-----SVVEADTVTTF 305
Query: 250 LEIVYKAEVESVLEDNKNEYPLRVQLTNSQLVECDFLISATGVEPSVNFTWDKVPEKGQD 309
+ ++L + N LR+++ I G P + ++ V +
Sbjct: 306 FFFFFFFFCANILFHHLNYLLLRMKV-----------IVGIGARPVIG-PFEAVGVNTKV 353
Query: 310 GGLAVNEFQETSIKNVFAAGDVAS 333
GG+ V+ TSI +FA GDVA+
Sbjct: 354 GGIEVDSLFRTSIPGIFAIGDVAA 377
>02_05_0462 -
29245307-29246032,29246120-29246235,29246327-29246546,
29246725-29246843,29247100-29247180,29247279-29247330,
29247449-29247574
Length = 479
Score = 32.7 bits (71), Expect = 0.65
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 86 DTEKQKALTDKGVHIQYDVICICTGG----IPRLISDSKNSKRVLGIRDTESVKDFQQKL 141
D ++ LT G I Y + + TG + +++ V +R+ E +
Sbjct: 100 DVRQKTLLTSSGETISYKTLIVATGARAVKLEEFGVSGSDARNVCYLRNVEDADKLVGVM 159
Query: 142 KT--GRRMVIVGNGGIASEIVHA--TSGIEKVWVIRDDYISATFIDPGAAEFFQETF 194
++ G V+VG G I E A T+ I+ V + P AEF++ +
Sbjct: 160 RSCPGGNAVVVGGGYIGMECAAALVTNNIKVTMVFPKKHCMGRLFTPKIAEFYESYY 216
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 32.3 bits (70), Expect = 0.86
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 200 RKNQNTVLRRHIYSEEDSLVSLNKNLKSAALGPDWYRKLENIKSDRGVQE-LEIVYKAEV 258
R+ + V RHI S D L + +A PD RK + + GV+E +++ AE
Sbjct: 620 RERGSLVRLRHISS--DDLGGCDDEAPAAVDDPDGMRKQKKGQEGEGVEEEKKVILVAEY 677
Query: 259 ESVLEDNKN 267
++LE+NK+
Sbjct: 678 RALLEENKD 686
>02_01_0383 +
2776526-2776632,2777579-2777835,2777915-2778366,
2778845-2779102
Length = 357
Score = 31.9 bits (69), Expect = 1.1
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 2 SEINTTYLIVGGGIAGVTCVETLAILHPEKTLVLVTASTLVKNVSNVTFF-AKTIVNFDV 60
+E T ++VGGGIAG +T + P +VL+ K+ + + +++V
Sbjct: 3 AEGKTRVVVVGGGIAGSLLAKT---MQPHADVVLLDP----KDYLEIPWAELRSMVEPSF 55
Query: 61 NETEATSLQKIHPNLKIIYDSLKHLDTEKQKALTDKGVHIQYDVICICTGGIPRLISDSK 120
E + N I+ S ++ TE Q LT G + YD + I TG L S
Sbjct: 56 AERSLIYHRDYLTNATIVTSSAVNI-TE-QAVLTADGQSLAYDYLVIATG--HALTSPGS 111
Query: 121 NSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGIASEI 159
S+R+ E +D + K+++ ++I+G G E+
Sbjct: 112 RSERI-----KEFQRD-KGKIESSESVLIIGGGPTGVEL 144
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 3 EINTTYLIVGGGIAGVTCVETLAILHPEKTLVLV 36
E + + LI+GGG GV +A+ +PEK + LV
Sbjct: 127 ESSESVLIIGGGPTGVELAGEIAVDYPEKKVTLV 160
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 286 LISATGVEPSVNFTWDKVPEKGQDGGLAVNEFQ-ETSIKNVFAAGDVASAAWEHA 339
L A G EP+ F ++ E DG +A TS+K VFAAGDV + A
Sbjct: 249 LFFAIGHEPATKFLGGQL-ELDADGYVATKPGSTHTSVKGVFAAGDVQDKKYRQA 302
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 289 ATGVEPSV-NFTWDKVPEK-GQDGGLAVNEFQETSIKNVFAAGDV 331
ATG +P+ N ++V K ++G + V+E+ TS+ +++A GDV
Sbjct: 344 ATGRKPNTKNLGLEEVGVKLDKNGAIMVDEYSRTSVDSIWAVGDV 388
>07_03_0365 + 17288071-17288255,17288339-17288678
Length = 174
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 39 STLVKNVSNVTFFAKTIVNFDVNETEATSLQKIHPNLKIIY 79
++LV N SN T + + V + + +S Q+I P+L II+
Sbjct: 133 TSLVSNASNPTSILLACMAYIVGKRDKSSFQRIKPHLNIIF 173
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 286 LISATGVEPSVNFTWDKVPEKGQDGGLAVNEFQ-ETSIKNVFAAGDVASAAWEHA 339
L A G EP+ F ++ E DG + TS+K VFAAGDV + A
Sbjct: 286 LFFAIGHEPATKFLGGQL-ELDSDGYVVTKPGSTHTSVKGVFAAGDVQDKKYRQA 339
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 103 DVICICTGGIPRLISDSKNSKRVLGIRDTESVKDFQQKLKTGRRMVIVGNGGI 155
DV+ C + +I KN ++ I + E D + K K ++ IVG GGI
Sbjct: 176 DVVHACRKLVDLVI---KNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGGI 225
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 263 EDNKNEYPLRVQLTNSQLVECDFLISATGVEPS---VNFTWDKVPEKGQDGGLAVNEFQE 319
E +K ++V + + D ++ ATG P+ +N V E G + V+++
Sbjct: 266 ELSKTADGIKVVTDKGEEIIADVVLFATGRTPNSQRLNLEAAGV-EVDNIGAIKVDDYSR 324
Query: 320 TSIKNVFAAGDVAS 333
TS+ N++A GDV +
Sbjct: 325 TSVPNIWAVGDVTN 338
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 29.1 bits (62), Expect = 8.0
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 40 TLVKNVSNVTFFAKTIVNFDV-NETEATSLQKIHPNLKIIYDSLKHLDTEKQKALTDKGV 98
+L +SNV T++ V ETEA+ ++ + L DSL++ D EK + L +K
Sbjct: 1292 SLQSQLSNVEDRLATVMKDTVATETEASYMRNLVEELTGQLDSLRN-DHEKLQ-LKNKDA 1349
Query: 99 HIQYDVICICTGGIPRLISDSKNSKRVLGI---RDTESVKDFQQKLKTGRRMVIVGNGGI 155
V + ++ + + L I R E ++ ++ +K+ +
Sbjct: 1350 DDLLRVHMSTEAELADRVAALEAAIHSLEIDLARVNEEKEELEELIKSNEEQFVQVGTDK 1409
Query: 156 ASEIVHATSGIEKVWVIRDDYISATFIDPGAAEFFQETFKNENERKNQNTVLRRHIYSEE 215
+ +IV + E+V +DD + + E + ++E + N VL+ + +
Sbjct: 1410 SRDIVESIDSSERVLKYQDDILQLKVLLTNLEEQVDDLRSTKDEVEILNMVLKSKLEEQR 1469
Query: 216 DSLVSLNKN 224
++SL +N
Sbjct: 1470 TEILSLLQN 1478
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,605,090
Number of Sequences: 37544
Number of extensions: 506479
Number of successful extensions: 1222
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1210
Number of HSP's gapped (non-prelim): 22
length of query: 472
length of database: 14,793,348
effective HSP length: 85
effective length of query: 387
effective length of database: 11,602,108
effective search space: 4490015796
effective search space used: 4490015796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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