Silkworm BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001255-TA|BGIBMGA001255-PA|IPR001054|Adenylyl cyclase
class-3/4/guanylyl cyclase
         (607 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol pyrop...    29   1.9  
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe...    29   1.9  
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ...    28   3.3  
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr...    28   3.3  
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    28   3.3  
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe...    28   4.3  
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch...    27   5.7  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    27   5.7  
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom...    27   7.5  
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos...    27   10.0 

>SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol
           pyrophosphate phosphatase fusion 1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 603

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 390 WLLHNIIPRHVADQLKNTAKYSENHKDVAIIFASIINFNEMYDESYLKGKEYLRILNELI 449
           W+ ++++        K   KY EN+K     F + +N NE+  ++Y +  E L+ L+ L+
Sbjct: 166 WIQNHVVQAQYYRTEKQYDKYLENNK-----FLTHLN-NEVLHDNYTRNIEKLKELDNLV 219

Query: 450 A---DFDELLERP 459
           A   + D+++E P
Sbjct: 220 AVSFERDDIVEPP 232


>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 972

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/67 (25%), Positives = 32/67 (47%)

Query: 79  YFVQPPINRFTLCFESDEMERHYRDKAHRSDDCEDLPPTLTTSRFNTALDILVSALIFLA 138
           Y V   I  F +CFES+ +   ++ K          PP ++T+ +  + D  +  L+F  
Sbjct: 458 YIVFNDIQDFIVCFESETIAFAFKYKFFAFCGVPLFPPGISTNSWFASYDKGIYNLLFGM 517

Query: 139 VSASAFV 145
            S+ +F+
Sbjct: 518 ASSESFI 524


>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 589

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)

Query: 451 DFDELLERPQFQHVEKIKTIGSTFMAASGLNPDLRHASRGTYDHLYQLMDFALEMQKV 508
           +F +L+E  Q QH E++K I +   A   LN   R  ++       QL +  L MQK+
Sbjct: 355 EFHKLIEERQRQHEERLKRINANKKALEELNQKKRELAQ------QQLKEQELLMQKI 406


>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 661

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 31  SSLNDLHSKSRLPPPLNDQQVQSLQKLRKQSDLQLIRCVQDNARSGINYFV 81
           + LN+LH   RL    N +  + L+KL+    ++L     D +++GI + +
Sbjct: 151 AKLNELHQIYRLRKEKNIEIKEELKKLQDSLSIKLSMPADDLSKNGIKHLI 201


>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 419

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 7   LNHIANSQNDMLQHRVSGYYTSSQSSLNDLHSKSRLPPPLNDQQ 50
           LN +   QN    +RVS +  S  S+LN+  + S   P  ND Q
Sbjct: 222 LNGVNYKQNTT-NNRVSSFQNSQYSTLNNFQNNSNQSPNSNDLQ 264


>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
          pombe|chr 1|||Manual
          Length = 319

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 7  LNHIANSQNDMLQHRVSGYYTSSQSSLNDLHSKSRLPPPLNDQQVQSLQKLRKQSDLQLI 66
          ++H+    N  +Q      Y  +    N+L+      P L DQ++  LQ  ++ S  +++
Sbjct: 25 ISHLTTIHNSSVQTLAKNAYLCASEIANELNQN----PNLKDQEILLLQIAQENSLKRVL 80

Query: 67 RCVQDNARSG 76
          R  Q   R G
Sbjct: 81 RQQQKERREG 90


>SPAC29B12.10c |||OPT oligopeptide transporter
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 851

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 123 FNTALDILVSALIFLAVSASAFVTCSDWWRIVGWFAFFAVIELVAIALCFYRHYLKWQTH 182
           +N+ L IL     +  V  ++    S WW I   F    +I  + + + +Y+    W ++
Sbjct: 377 YNSGLGILPLTFDWQQVVYNSNPLASPWWVICNTFGSVVLIFWIVVPILYYKGV--WFSN 434

Query: 183 HDPRSVAETF 192
           + P   + TF
Sbjct: 435 YLPMLSSSTF 444


>SPAC29B12.07 |sec16||multidomain vesicle coat component
           Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 433 ESYLKGKEYLRILNELIADFDELLERPQFQHVEKIKT 469
           E+ LKG E      + I D DE + +P    VEKI+T
Sbjct: 162 ETTLKGDENYSSSQKEIYDNDETIPKPPSPEVEKIET 198


>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 383

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 453 DELLERPQ-FQHVEKIKTIGSTFMAASGLNPDLRHASRGTYDHLYQLMDFALEMQKVVDN 511
           D + E P+ + H   + T G+T    S      R++  GT D+        L+  +VVDN
Sbjct: 295 DVINEPPRRYSHANGVTTSGTTHSYTS--TGSKRYSQMGTEDYQPSFQPNILQSTQVVDN 352

Query: 512 F 512
           F
Sbjct: 353 F 353


>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 790

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 444 ILNELIADFDELLERPQFQHVEKIKTIGSTFMAASGLNPDLRHASRG 490
           +L + I + DE L R +F   +  K +     A   +NP L H S G
Sbjct: 344 LLRQNINNVDEWLRRVKFLEDDSEKVVQVYTDAIKNVNPKLAHGSLG 390


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.324    0.138    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,829,189
Number of Sequences: 5004
Number of extensions: 121682
Number of successful extensions: 437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 12
length of query: 607
length of database: 2,362,478
effective HSP length: 77
effective length of query: 530
effective length of database: 1,977,170
effective search space: 1047900100
effective search space used: 1047900100
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 56 (26.6 bits)