Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001253-TA|BGIBMGA001253-PA|undefined
(127 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar traffi... 36 0.030
U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome... 36 0.030
U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein. 36 0.030
U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein. 36 0.030
BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein. 36 0.030
BC032998-1|AAH32998.1| 431|Homo sapiens MANSC domain containing... 32 0.48
AY358563-1|AAQ88926.1| 431|Homo sapiens FFGG316 protein. 32 0.48
AK023622-1|BAB14621.1| 431|Homo sapiens protein ( Homo sapiens ... 32 0.48
AK001160-1|BAA91526.1| 397|Homo sapiens protein ( Homo sapiens ... 32 0.48
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 29 4.5
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 29 4.5
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 29 4.5
M89914-1|AAA59925.1| 2839|Homo sapiens neurofibromin protein. 29 6.0
M82814-1|AAA59924.1| 2818|Homo sapiens GAP-related protein protein. 29 6.0
M60496-1|AAA59928.1| 610|Homo sapiens neurofibromatosis protein... 29 6.0
M38107-1|AAB59558.1| 2503|Homo sapiens neurofibromatosis protein... 29 6.0
M38106-1|AAA74897.1| 2485|Homo sapiens neurofibromatosis type 1 ... 29 6.0
AY796305-1|AAV50004.1| 2818|Homo sapiens neurofibromin 1 (neurof... 29 6.0
BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 28 7.9
BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 28 7.9
BC090932-1|AAH90932.1| 1377|Homo sapiens NIN protein protein. 28 7.9
AY736182-1|AAU86898.1| 1989|Homo sapiens ninein isoform 6 protein. 28 7.9
AY027796-1|AAK27377.1| 530|Homo sapiens ninein centrosomal prot... 28 7.9
AY027795-1|AAK27376.1| 573|Homo sapiens ninein centrosomal prot... 28 7.9
AY027794-1|AAK27375.1| 573|Homo sapiens ninein centrosomal prot... 28 7.9
AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens ... 28 7.9
AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens ... 28 7.9
AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens ... 28 7.9
AF302773-1|AAG33512.2| 2090|Homo sapiens ninein-Lm isoform protein. 28 7.9
AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein. 28 7.9
AF186776-1|AAG17027.1| 573|Homo sapiens ninein centrosomal prot... 28 7.9
AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein. 28 7.9
>U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar
trafficking phosphoprotein protein.
Length = 1411
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIP-ISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERK 60
ANTT+++ TE+ S + P + ++ +A + T SSD+ D + A EK+ + +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVR 224
Query: 61 TMILPDKMTQSKTVTKHP 78
P K T K T P
Sbjct: 225 AASAPAKGTPGKGATPAP 242
>U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome
protein.
Length = 1411
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIP-ISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERK 60
ANTT+++ TE+ S + P + ++ +A + T SSD+ D + A EK+ + +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVR 224
Query: 61 TMILPDKMTQSKTVTKHP 78
P K T K T P
Sbjct: 225 AASAPAKGTPGKGATPAP 242
>U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIP-ISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERK 60
ANTT+++ TE+ S + P + ++ +A + T SSD+ D + A EK+ + +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVR 224
Query: 61 TMILPDKMTQSKTVTKHP 78
P K T K T P
Sbjct: 225 AASAPAKGTPGKGATPAP 242
>U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIP-ISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERK 60
ANTT+++ TE+ S + P + ++ +A + T SSD+ D + A EK+ + +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVR 224
Query: 61 TMILPDKMTQSKTVTKHP 78
P K T K T P
Sbjct: 225 AASAPAKGTPGKGATPAP 242
>BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein.
Length = 1126
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIP-ISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERK 60
ANTT+++ TE+ S + P + ++ +A + T SSD+ D + A EK+ + +
Sbjct: 150 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVR 209
Query: 61 TMILPDKMTQSKTVTKHP 78
P K T K T P
Sbjct: 210 AASAPAKGTPGKGATPAP 227
>BC032998-1|AAH32998.1| 431|Homo sapiens MANSC domain containing 1
protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.48
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 1 MANTTVLNSTEKLSSENVISDSKIPISASSEAGIHK----KPTLLSSDKMDNDANAQEKL 56
MA T VL +T + +++ S IP + S ++ PT LS +++ +
Sbjct: 297 MATTAVLTTTFQAPTDSKGSLETIPFTEISNLTLNTGNVYNPTALSMSNVESSTMNKTAS 356
Query: 57 TERKTMILPDKMTQSKTVTKHPGMXXXX---XXXXXXXXMFAVLGYLALKRG-QEAWKNR 112
E + P +Q G+ +F V+G + L R E+ + +
Sbjct: 357 WEGREAS-PGSSSQGSVPENQYGLPFEKWLLIGSLLFGVLFLVIGLVLLGRILSESLRRK 415
Query: 113 HYKRMDFLLDGMYND 127
Y R+D+L++G+Y D
Sbjct: 416 RYSRLDYLINGIYVD 430
>AY358563-1|AAQ88926.1| 431|Homo sapiens FFGG316 protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.48
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 1 MANTTVLNSTEKLSSENVISDSKIPISASSEAGIHK----KPTLLSSDKMDNDANAQEKL 56
MA T VL +T + +++ S IP + S ++ PT LS +++ +
Sbjct: 297 MATTAVLTTTFQAPTDSKGSLETIPFTEISNLTLNTGNVYNPTALSMSNVESSTMNKTAS 356
Query: 57 TERKTMILPDKMTQSKTVTKHPGMXXXX---XXXXXXXXMFAVLGYLALKRG-QEAWKNR 112
E + P +Q G+ +F V+G + L R E+ + +
Sbjct: 357 WEGREAS-PGSSSQGSVPENQYGLPFEKWLLIGSLLFGVLFLVIGLVLLGRILSESLRRK 415
Query: 113 HYKRMDFLLDGMYND 127
Y R+D+L++G+Y D
Sbjct: 416 RYSRLDYLINGIYVD 430
>AK023622-1|BAB14621.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ13560 fis, clone PLACE1007877. ).
Length = 431
Score = 32.3 bits (70), Expect = 0.48
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 1 MANTTVLNSTEKLSSENVISDSKIPISASSEAGIHK----KPTLLSSDKMDNDANAQEKL 56
MA T VL +T + +++ S IP + S ++ PT LS +++ +
Sbjct: 297 MATTAVLTTTFQAPTDSKGSLETIPFTEISNLTLNTGNVYNPTALSMSNVESSTMNKTAS 356
Query: 57 TERKTMILPDKMTQSKTVTKHPGMXXXX---XXXXXXXXMFAVLGYLALKRG-QEAWKNR 112
E + P +Q G+ +F V+G + L R E+ + +
Sbjct: 357 WEGREAS-PGSSSQGSVPENQYGLPFEKWLLIGSLLFGVLFLVIGLVLLGRILSESLRRK 415
Query: 113 HYKRMDFLLDGMYND 127
Y R+D+L++G+Y D
Sbjct: 416 RYSRLDYLINGIYVD 430
>AK001160-1|BAA91526.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10298 fis, clone NT2RM1001115, weakly similar to
ENDOCHITINASE 2 PRECURSOR (EC 3.2.1.14). ).
Length = 397
Score = 32.3 bits (70), Expect = 0.48
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 1 MANTTVLNSTEKLSSENVISDSKIPISASSEAGIHK----KPTLLSSDKMDNDANAQEKL 56
MA T VL +T + +++ S IP + S ++ PT LS +++ +
Sbjct: 263 MATTAVLTTTFQAPTDSKGSLETIPFTEISNLTLNTGNVYNPTALSMSNVESSTMNKTAS 322
Query: 57 TERKTMILPDKMTQSKTVTKHPGMXXXX---XXXXXXXXMFAVLGYLALKRG-QEAWKNR 112
E + P +Q G+ +F V+G + L R E+ + +
Sbjct: 323 WEGREAS-PGSSSQGSVPENQYGLPFEKWLLIGSLLFGVLFLVIGLVLLGRILSESLRRK 381
Query: 113 HYKRMDFLLDGMYND 127
Y R+D+L++G+Y D
Sbjct: 382 RYSRLDYLINGIYVD 396
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 93 MFAVLGYLALKRGQEAWKNRHYKRMDFLLDGMYND 127
+F + L + E++K + Y ++D+L++GMY D
Sbjct: 412 LFITVLVLFALQAYESYKKKDYTQVDYLINGMYAD 446
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 93 MFAVLGYLALKRGQEAWKNRHYKRMDFLLDGMYND 127
+F + L + E++K + Y ++D+L++GMY D
Sbjct: 412 LFITVLVLFALQAYESYKKKDYTQVDYLINGMYAD 446
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 93 MFAVLGYLALKRGQEAWKNRHYKRMDFLLDGMYND 127
+F + L + E++K + Y ++D+L++GMY D
Sbjct: 412 LFITVLVLFALQAYESYKKKDYTQVDYLINGMYAD 446
>M89914-1|AAA59925.1| 2839|Homo sapiens neurofibromin protein.
Length = 2839
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 2532 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 2582
>M82814-1|AAA59924.1| 2818|Homo sapiens GAP-related protein protein.
Length = 2818
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 2511 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 2561
>M60496-1|AAA59928.1| 610|Homo sapiens neurofibromatosis protein
type 1 protein.
Length = 610
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 303 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 353
>M38107-1|AAB59558.1| 2503|Homo sapiens neurofibromatosis protein type
1 protein.
Length = 2503
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 2178 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 2228
>M38106-1|AAA74897.1| 2485|Homo sapiens neurofibromatosis type 1
protein protein.
Length = 2485
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 2178 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 2228
>AY796305-1|AAV50004.1| 2818|Homo sapiens neurofibromin 1
(neurofibromatosis, von Recklinghausen disease, Watson
disease) protein.
Length = 2818
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 ANTTVLNSTEKLSSENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQ 53
ANT L T K S +++ISD+K P E+GI P + + D + Q
Sbjct: 2511 ANTKKLLGTRK-SFDHLISDTKAPKRQEMESGITTPPKMRRVAETDYEMETQ 2561
>BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 SASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTK 76
S+ SE HKK + S + D +EK+ +RK +L D + K K
Sbjct: 362 SSDSEEEEHKKQKMDSDE--DEKEGEEEKVAKRKAAVLSDSEDEEKASAK 409
>BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 SASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTK 76
S+ SE HKK + S + D +EK+ +RK +L D + K K
Sbjct: 362 SSDSEEEEHKKQKMDSDE--DEKEGEEEKVAKRKAAVLSDSEDEEKASAK 409
>BC090932-1|AAH90932.1| 1377|Homo sapiens NIN protein protein.
Length = 1377
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 1098 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 1157
Query: 76 KH 77
H
Sbjct: 1158 TH 1159
>AY736182-1|AAU86898.1| 1989|Homo sapiens ninein isoform 6 protein.
Length = 1989
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 1811 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 1870
Query: 76 KH 77
H
Sbjct: 1871 TH 1872
>AY027796-1|AAK27377.1| 530|Homo sapiens ninein centrosomal protein
isoform C protein.
Length = 530
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 251 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 310
Query: 76 KH 77
H
Sbjct: 311 TH 312
>AY027795-1|AAK27376.1| 573|Homo sapiens ninein centrosomal protein
isoform B protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 251 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 310
Query: 76 KH 77
H
Sbjct: 311 TH 312
>AY027794-1|AAK27375.1| 573|Homo sapiens ninein centrosomal protein
isoform A protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 251 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 310
Query: 76 KH 77
H
Sbjct: 311 TH 312
>AK056881-1|BAB71301.1| 494|Homo sapiens protein ( Homo sapiens
cDNA FLJ32319 fis, clone PROST2003472. ).
Length = 494
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 SASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTK 76
S+ SE HKK + S + D +EK+ +RK +L D + K K
Sbjct: 37 SSDSEEEEHKKQKMDSDE--DEKEGEEEKVAKRKAAVLSDSEDEEKASAK 84
>AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens
cDNA FLJ14655 fis, clone NT2RP2002292. ).
Length = 819
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 SASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTK 76
S+ SE HKK + S + D +EK+ +RK +L D + K K
Sbjct: 362 SSDSEEEEHKKQKMDSDE--DEKEGEEEKVAKRKAAVLSDSEDEEKASAK 409
>AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
CYLICIN I. ).
Length = 489
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 SASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVTK 76
S+ SE HKK + S + D +EK+ +RK +L D + K K
Sbjct: 155 SSDSEEEEHKKQKMDSDE--DEKEGEEEKVAKRKAAVLSDSEDEEKASAK 202
>AF302773-1|AAG33512.2| 2090|Homo sapiens ninein-Lm isoform protein.
Length = 2090
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 1811 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 1870
Query: 76 KH 77
H
Sbjct: 1871 TH 1872
>AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein.
Length = 2096
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 1817 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 1876
Query: 76 KH 77
H
Sbjct: 1877 TH 1878
>AF186776-1|AAG17027.1| 573|Homo sapiens ninein centrosomal protein
protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 251 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 310
Query: 76 KH 77
H
Sbjct: 311 TH 312
>AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein.
Length = 1313
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ENVISDSKIPISASSEAGIHKKPTLLSSDKMDNDANAQEKLTERKTMILPDKMTQSKTVT 75
+N S P A+ +G+H + LS DK+D+ N +++L ++ L + +K
Sbjct: 1135 QNAGGKSWAPEIATHPSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQNTKAEL 1194
Query: 76 KH 77
H
Sbjct: 1195 TH 1196
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.311 0.125 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,619,269
Number of Sequences: 224733
Number of extensions: 415998
Number of successful extensions: 1238
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1221
Number of HSP's gapped (non-prelim): 32
length of query: 127
length of database: 73,234,838
effective HSP length: 81
effective length of query: 46
effective length of database: 55,031,465
effective search space: 2531447390
effective search space used: 2531447390
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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