GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001253-TA|BGIBMGA001253-PA|undefined
         (127 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          25   0.26 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.26 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   4.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   4.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   5.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    20   7.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    20   7.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    20   7.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    20   7.4  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    20   9.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 25 PISASSEAGIHKKPTLLS 42
          P   +S+AGIH+K  LLS
Sbjct: 52 PAQTTSKAGIHRKKVLLS 69


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 25  PISASSEAGIHKKPTLLS 42
           P   +S+AGIH+K  LLS
Sbjct: 174 PAQTTSKAGIHRKKVLLS 191


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query: 29 SSEAGIHKKPTLL 41
          +S+AGIH+K  LL
Sbjct: 57 TSKAGIHRKKVLL 69


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 8    NSTEKLSSENVISDSKIPI-SASSEAGIHKKPTLLSSDKM 46
            N  EKL   ++  D  + + S  +EAG  +   LL SDK+
Sbjct: 1481 NHNEKL---HIPKDKSVSVLSRENEAGQKEVKVLLGSDKI 1517


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 110 KNRHYKRMDFLLDGMYND 127
           +NR YK  D   + +YN+
Sbjct: 8   RNREYKEKDRRYEKLYNE 25


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
          factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 39 TLLSSDKMDNDANAQEKLTERKTMILPDKMT 69
          T+ + DK+DN  + Q K      + + D+MT
Sbjct: 33 TIFNEDKLDNLMDKQFKNKSLPVIEIWDQMT 63


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 110 KNRHYKRMDFLLDGMYND 127
           +NR Y++ D   + +YN+
Sbjct: 8   RNREYRKKDRQYEKLYNE 25


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 110 KNRHYKRMDFLLDGMYND 127
           +NR Y++ D   + +YN+
Sbjct: 8   RNREYRKKDRQYEKLYNE 25


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 110 KNRHYKRMDFLLDGMYND 127
           +NR Y++ D   + +YN+
Sbjct: 8   RNREYRKKDRQYEKLYNE 25


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 110 KNRHYKRMDFLLDGMYND 127
           +NR Y++ D   + +YN+
Sbjct: 8   RNREYRKKDRQYEKLYNE 25


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 6   VLNSTEKLSSENVISDSKIP 25
           +LN  ++  SEN+I+D + P
Sbjct: 81  LLNFPKRSFSENMINDHRQP 100


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.125    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,256
Number of Sequences: 429
Number of extensions: 995
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 127
length of database: 140,377
effective HSP length: 51
effective length of query: 76
effective length of database: 118,498
effective search space:  9005848
effective search space used:  9005848
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)