Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001252-TA|BGIBMGA001252-PA|undefined
(282 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal p... 151 4e-36
BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal... 151 4e-36
BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal... 151 4e-36
Z97634-4|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal p... 150 5e-36
Z97634-2|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal p... 146 1e-34
Z97634-5|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal p... 138 2e-32
Z97634-6|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal p... 124 5e-28
U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15 prot... 85 3e-16
BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal... 84 5e-16
CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein. 82 2e-15
AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated ant... 78 3e-14
AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens ... 56 1e-07
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 32 2.0
>Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 151 bits (365), Expect = 4e-36
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 9/238 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 243
>BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 151 bits (365), Expect = 4e-36
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 9/238 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGYYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 243
>BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 151 bits (365), Expect = 4e-36
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 9/238 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 243
>Z97634-4|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 240
Score = 150 bits (364), Expect = 5e-36
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 9/234 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLK 249
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQ 239
>Z97634-2|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 146 bits (353), Expect = 1e-34
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LK DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 243
>Z97634-5|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 218
Score = 138 bits (334), Expect = 2e-32
Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 7/207 (3%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSK 222
+YK + + EE EW GLT EA+ K
Sbjct: 190 KYKEF--AIPEEEAEWVGLTLEEAIEK 214
>Z97634-6|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 194
Score = 124 bits (298), Expect = 5e-28
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 5/185 (2%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 136
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 189
Query: 196 EYKTY 200
+YK +
Sbjct: 190 KYKEF 194
>U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15
protein.
Length = 128
Score = 85.0 bits (201), Expect = 3e-16
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S ++LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 115
>BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 128
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQAL 115
>CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein.
Length = 128
Score = 82.2 bits (194), Expect = 2e-15
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 137 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQMEIYE 195
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY+
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYD 61
Query: 196 EYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAGI 253
+YK + + EE EW GLT EA+ K L+E P+PL ++ L+++L+ +
Sbjct: 62 KYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIHVAELIQQLQQQAL 115
>AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated
antigen recgonized by T lymphocytes ; P15 protein.
Length = 131
Score = 78.2 bits (184), Expect = 3e-14
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 137 RTISLINDHYGFDHYLLK---TPACDLVSVLALKLKKQILTELMNGCPR-HAYDPKKQME 192
RT+ LI++ YG D Y+LK TP DL S + LK+ +L L P+ H DP+++
Sbjct: 2 RTLDLIDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAA 61
Query: 193 IYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAG 252
IY++YK + + EE EW GLT EA+ K L+E P+PL +Y L+++L+
Sbjct: 62 IYDKYKEF--AIPEEEAEWVGLTLEEAIEKQRLLEE--KDPVPLFKIYVAELIQQLQQQA 117
Query: 253 I 253
+
Sbjct: 118 L 118
>AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ39525 fis, clone PUAEN2002758. ).
Length = 158
Score = 56.4 bits (130), Expect = 1e-07
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 19 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 78
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 79 KFPAEINEGIWGGEAVVKG 97
FP E G+WGGE + G
Sbjct: 70 YFPPESQRGLWGGEGWILG 88
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 167 KLKKQILTELMNGCPRHAYDPKKQMEIYEEYK-TYLSSYTPEEIEWYGLTWYEALSKVAK 225
+L+KQ E MN RH + +K+ ++ + K + + IE+ + ++AK
Sbjct: 228 QLEKQQKLEKMNAMRRHIEEFQKEQALWRKKKREEMEEENRKIIEFANMQQQREEDRMAK 287
Query: 226 LKEAANKPIPLKNVYRKNLVEKLK 249
++E K + L+N + L E L+
Sbjct: 288 VQENEEKRLQLQNALTQKLEEMLR 311
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,820,384
Number of Sequences: 224733
Number of extensions: 1663694
Number of successful extensions: 4085
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4046
Number of HSP's gapped (non-prelim): 13
length of query: 282
length of database: 73,234,838
effective HSP length: 89
effective length of query: 193
effective length of database: 53,233,601
effective search space: 10274084993
effective search space used: 10274084993
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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