GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001252-TA|BGIBMGA001252-PA|undefined
         (282 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-827|AAF52188.1|  302|Drosophila melanogaster CG3782-PA ...   305   4e-83
AY075494-1|AAL68304.1|  302|Drosophila melanogaster RE47667p pro...   299   4e-81
BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p pro...    30   3.1  
AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA...    30   3.1  
AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p pro...    30   4.1  
AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA...    30   4.1  

>AE014134-827|AAF52188.1|  302|Drosophila melanogaster CG3782-PA
           protein.
          Length = 302

 Score =  305 bits (749), Expect = 4e-83
 Identities = 146/292 (50%), Positives = 201/292 (68%), Gaps = 23/292 (7%)

Query: 12  QLSKTFKKKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPI 71
           +L   +K+ GRF+ G+ ++LP AY+KFWREWK+  PAAVH++P+E +W+RDE+T    P+
Sbjct: 10  KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPV 69

Query: 72  QNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLS 131
           QNIP+PL    E + GIWGGEAV+KGFQKR+  +RRVPH+WVP L+R+VV S VL+ ++S
Sbjct: 70  QNIPLPLIDTPESHRGIWGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMS 129

Query: 132 VTVTDRTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPRHAYDPKKQM 191
           V VT+RT+  I++ +GFDHYLLK  ACDL S LALKLK+++L  L NG P  A +P++Q 
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQ 189

Query: 192 EIYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSA 251
           E+ +EY+ YL  YTPEEI+WYG T+ EA+ K+ K    A K +P K  +R  L+E+L+ A
Sbjct: 190 EVLKEYRRYLEPYTPEEIDWYGHTYLEAIRKLQKQLREAEKVVPHKLEFRGKLIEQLRQA 249

Query: 252 GI------------------ESKSSSAD-----EISATTSWLSKMNPFGKKD 280
           GI                  E K S  +     E S ++SWLSK+NPFGKK+
Sbjct: 250 GISEAGKLEKPDALAAESSVEHKDSDIEALTKLESSPSSSWLSKINPFGKKE 301


>AY075494-1|AAL68304.1|  302|Drosophila melanogaster RE47667p
           protein.
          Length = 302

 Score =  299 bits (733), Expect = 4e-81
 Identities = 144/292 (49%), Positives = 200/292 (68%), Gaps = 23/292 (7%)

Query: 12  QLSKTFKKKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPI 71
           +L   +K+ GRF+ G+ ++LP AY+KFWREWK+  PAAVH++P+E +W+RDE+T    P+
Sbjct: 10  KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPV 69

Query: 72  QNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLS 131
           QNIP+PL    E + G+ GGEAV+KGFQKR+  +RRVPH+WVP L+R+VV S VL+ ++S
Sbjct: 70  QNIPLPLIDTPESHRGMGGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMS 129

Query: 132 VTVTDRTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCPRHAYDPKKQM 191
           V VT+RT+  I++ +GFDHYLLK  ACDL S LALKLK+++L  L NG P  A +P++Q 
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQ 189

Query: 192 EIYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSA 251
           E+ +EY+ YL  YTPEEI+WYG T+ EA+ K+ K    A K +P K  +R  L+E+L+ A
Sbjct: 190 EVLKEYRRYLEPYTPEEIDWYGHTYLEAIRKLQKQLREAEKVVPHKLEFRGKLIEQLRQA 249

Query: 252 GI------------------ESKSSSAD-----EISATTSWLSKMNPFGKKD 280
           GI                  E K S  +     E S ++SWLSK+NPFGKK+
Sbjct: 250 GISEAGKLEKPDALAAESSVEHKDSDIEALTKLESSPSSSWLSKINPFGKKE 301


>BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p
           protein.
          Length = 766

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 193 IYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAG 252
           I EE+ TY   Y  +E  ++ +     +  + K++EA  KPI   ++ RKN  +KL    
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIREADKKPI--FSLVRKNDKKKLLETV 754

Query: 253 IESKSSSAD 261
           ++     AD
Sbjct: 755 LKQLKHIAD 763


>AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA
           protein.
          Length = 766

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 193 IYEEYKTYLSSYTPEEIEWYGLTWYEALSKVAKLKEAANKPIPLKNVYRKNLVEKLKSAG 252
           I EE+ TY   Y  +E  ++ +     +  + K++EA  KPI   ++ RKN  +KL    
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIREADKKPI--FSLVRKNDKKKLLETV 754

Query: 253 IESKSSSAD 261
           ++     AD
Sbjct: 755 LKQLKHIAD 763


>AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p
           protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 94  VVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTISLI--NDHYGFDHY 151
           V K FQK  D    VP   +P  +R  +    +    S       ISL    D + FD  
Sbjct: 179 VQKYFQKLHDAGMPVPGR-IPKHRRPGLSKPKIKLRKSTFFPAHNISLQMPEDDFTFDDL 237

Query: 152 LLKTPACDLVSVLALKLKKQILTELMN 178
            + +PA D++ + A K++ +I +E M+
Sbjct: 238 RIPSPASDMLLMPASKIEPKIESEYMD 264


>AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA
           protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 94  VVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTISLI--NDHYGFDHY 151
           V K FQK  D    VP   +P  +R  +    +    S       ISL    D + FD  
Sbjct: 179 VQKYFQKLHDAGMPVPGR-IPKHRRPGLSKPKIKLRKSTFFPAHNISLQMPEDDFTFDDL 237

Query: 152 LLKTPACDLVSVLALKLKKQILTELMN 178
            + +PA D++ + A K++ +I +E M+
Sbjct: 238 RIPSPASDMLLMPASKIEPKIESEYMD 264


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,697,553
Number of Sequences: 52641
Number of extensions: 574162
Number of successful extensions: 1446
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1442
Number of HSP's gapped (non-prelim): 8
length of query: 282
length of database: 24,830,863
effective HSP length: 84
effective length of query: 198
effective length of database: 20,409,019
effective search space: 4040985762
effective search space used: 4040985762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)