Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001250-TA|BGIBMGA001250-PA|IPR011028|Cyclin-like,
IPR006671|Cyclin, N-terminal, IPR006670|Cyclin
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 68 8e-12
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 68 1e-11
12_01_1112 - 11866376-11866447,11866528-11866662,11866772-118669... 66 2e-11
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 66 3e-11
12_02_0902 + 24176326-24176706,24176785-24177017,24177121-241772... 64 1e-10
05_05_0322 + 24094831-24094992,24095147-24095216,24096184-240963... 52 6e-07
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 51 1e-06
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564... 50 3e-06
04_04_0807 - 28192320-28192494,28192611-28192759,28192882-281929... 49 4e-06
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 49 4e-06
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 48 7e-06
09_03_0160 - 12915283-12915453,12915546-12915713,12915944-129159... 46 5e-05
12_02_0451 - 19179592-19179648,19179745-19179879,19180214-191802... 42 8e-04
03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459 39 0.004
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711... 38 0.013
09_04_0441 + 17626285-17626620,17626726-17626812,17627195-176272... 36 0.030
07_03_1300 - 25609670-25609915,25610006-25610130,25610240-256104... 36 0.040
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 35 0.092
08_02_1018 + 23640889-23641245,23641868-23641954,23642063-236421... 33 0.21
06_03_1476 - 30399317-30399347,30399636-30399722,30400035-304001... 33 0.37
02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145... 30 2.0
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 30 2.6
12_02_0942 - 24653834-24654046,24654346-24654482,24654626-246549... 29 3.5
02_04_0536 + 23730396-23731736 29 3.5
03_03_0222 - 15559996-15560188,15561120-15561150,15561645-155617... 29 4.6
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 29 6.0
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 28 8.0
05_06_0106 - 25611239-25611295,25611388-25611477,25611582-256116... 28 8.0
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 68.1 bits (159), Expect = 8e-12
Identities = 28/74 (37%), Positives = 50/74 (67%)
Query: 143 ANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQL 202
A+Y TVQ ++T +MR ++ +W++EV E+ + L +S++DRFLS ++ + ++QL
Sbjct: 124 ADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQL 183
Query: 203 LGTACLLLASKLRE 216
LG + +L+ASK E
Sbjct: 184 LGVSAMLIASKYEE 197
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 136 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 195
E R + ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS +
Sbjct: 252 ETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEI 311
Query: 196 GKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSITLTDLCRN 243
+ ++QLLG AC+L+A+K E CA + + T N+ D C N
Sbjct: 312 NRQRLQLLGVACMLIAAKYEE--ICAPQVEEFCYITDNTY-FRDECWN 356
>12_01_1112 -
11866376-11866447,11866528-11866662,11866772-11866921,
11867263-11867338,11867426-11867559,11867655-11867747,
11868456-11868589,11868696-11868744,11869271-11869441,
11870291-11870452
Length = 391
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 136 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 195
E R + ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS +
Sbjct: 172 ETRKHPSTDFMETLQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEI 231
Query: 196 GKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANS 234
+ ++QLLG AC+L+A+K +E CA + + T N+
Sbjct: 232 NRQRLQLLGVACMLIAAKYKE--ICAPQVEEFCYITDNT 268
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 142 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQ 201
+ ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS + + ++Q
Sbjct: 260 STDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQ 319
Query: 202 LLGTACLLLASKLREPGSCALPADLLVFYTANSITLTDLCRN 243
LLG AC+L+A+K E CA + + T N+ D C N
Sbjct: 320 LLGVACMLIAAKYEE--ICAPQVEEFCYITDNTY-FRDECWN 358
>12_02_0902 +
24176326-24176706,24176785-24177017,24177121-24177273,
24177392-24177425,24177536-24177685,24177772-24177906,
24177994-24178065
Length = 385
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 136 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 195
E R A+Y VQ ++T +MR ++ +W++EV ++ + LA+S+LDR+LS +
Sbjct: 129 EARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPL 188
Query: 196 GKSQVQLLGTACLLLASKLRE 216
++++QLLG +L+A+K E
Sbjct: 189 RRNRLQLLGVGAMLIAAKYEE 209
>05_05_0322 +
24094831-24094992,24095147-24095216,24096184-24096307,
24096403-24096502,24096598-24096825,24096916-24097041,
24097092-24097376,24097490-24097648,24097751-24097929,
24098078-24098210
Length = 521
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 150 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLL 209
Q E+ P MR ++A+W+++V E L + +DR+LS+ V + ++QL+G A +L
Sbjct: 294 QVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAML 353
Query: 210 LASKLRE 216
+ASK E
Sbjct: 354 IASKYEE 360
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 135 TEERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICA 194
TE Y Y + QTEI MR ++ +W++EV E L + +D++LS+
Sbjct: 174 TENTYRPLCTYMVS-QTEINERMRAILTDWLIEVHYRLMLMPETLYLTVYIIDQYLSLEN 232
Query: 195 VGKSQVQLLGTACLLLASKLREPGSCALPADLLV 228
V + ++QL+G + +L+A K E + L D LV
Sbjct: 233 VPRKELQLVGVSAMLIACKYEETWA-PLVKDFLV 265
>03_02_0103 +
5640652-5641029,5641458-5641693,5642292-5642367,
5642450-5642526,5642672-5642702,5642798-5642950,
5643259-5643300,5643372-5643440,5643645-5643752
Length = 389
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 144 NYFGTVQTEI-TPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQL 202
NY +Q I +R ++ +WM +V QEE A+S++DRFLS A +++L
Sbjct: 136 NYVQEIQGGIINMDVRGILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKLKL 195
Query: 203 LGTACLLLASKLRE 216
LGT L +ASK E
Sbjct: 196 LGTTALFVASKYEE 209
>04_04_0807 -
28192320-28192494,28192611-28192759,28192882-28192980,
28193212-28193433,28193522-28193611,28193837-28193959,
28194040-28194199,28194288-28194347,28194484-28194574,
28194667-28194730
Length = 410
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 136 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 195
EE V +Y + Q +I MR ++ +W++EV +E L ++ +DRFL V
Sbjct: 166 EEMSCVQPDYMSS-QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVV 224
Query: 196 GKSQVQLLGTACLLLASKLRE 216
+ ++QL+G +LLA K E
Sbjct: 225 PRKKLQLVGVTAMLLACKYEE 245
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 144 NYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLL 203
+Y T Q EI MR ++A+W++EV E L++ +DR+LS+ V + ++QL+
Sbjct: 211 DYIDT-QVEINSKMRAILADWIIEVHHKFELMPETLYLSMYVIDRYLSMQQVQRRELQLV 269
Query: 204 GTACLLLASKLRE 216
G + +L+A K E
Sbjct: 270 GVSAMLIACKYEE 282
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 156 HMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLR 215
+MR + WM E+ + + LA+S++DRFLS V + ++QLLGT+ L +ASK
Sbjct: 167 NMRGKLVNWMEELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKYE 226
Query: 216 EPGSCALPADLLVFYTANSIT 236
+ C A TA++ T
Sbjct: 227 D--RCHPSARFFSSITADTYT 245
>09_03_0160 -
12915283-12915453,12915546-12915713,12915944-12915957,
12916051-12916153,12917359-12917445,12917741-12918013
Length = 271
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 136 EERYAVTANYFGTVQTE-ITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICA 194
E Y+ ++Y +++ I P R W+L+V E G LA++++DRFLS+
Sbjct: 59 EAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRH 118
Query: 195 VGKSQ---VQLLGTACLLLASKLRE---PGSCALPADLLVFYTANSI 235
+ + Q +QLL ACL LA+K+ E P L A ++ + +N++
Sbjct: 119 LPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQASRVLKHISNAM 165
>12_02_0451 -
19179592-19179648,19179745-19179879,19180214-19180247,
19180347-19180423,19180523-19180598,19180792-19180925,
19181772-19181878,19182505-19182808,19182913-19183218
Length = 409
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 167 EVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALPADL 226
EV E+ + L I+ +DRFLS + + ++QLLG +L+ASK E CA +
Sbjct: 239 EVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEE--ICAPRVEE 296
Query: 227 LVFYTANSITLTDLCR 242
F T N+ T ++ +
Sbjct: 297 FCFITDNTYTKAEVLK 312
>03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459
Length = 341
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 158 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV-GKSQVQLLGTACLLLASKLRE 216
R ++ W++E + Q E + I +DRFL+ V G +QLLG AC LA+++ E
Sbjct: 276 RVVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSRNLQLLGIACTTLATRIEE 335
>06_01_0922 -
7113781-7113942,7114093-7114235,7115305-7115506,
7115590-7115685,7117053-7117139,7117237-7117638
Length = 363
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 164 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKS--QVQLLGTACLLLASKLRE 216
W+L+V G Q LA+S++DRF+S ++ QLL ACL LA+K+ E
Sbjct: 131 WILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPDHGWASQLLCVACLSLAAKMEE 185
>09_04_0441 +
17626285-17626620,17626726-17626812,17627195-17627293,
17627431-17627632,17627735-17627832,17628050-17628298
Length = 356
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 181 LAISFLDRFLSICAV--GKS-QVQLLGTACLLLASKLRE 216
LA+++LDRFLS+ + GK QLL ACL LA+K+ E
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEE 164
>07_03_1300 -
25609670-25609915,25610006-25610130,25610240-25610441,
25610533-25610631,25610735-25610821,25611120-25611431
Length = 356
Score = 35.9 bits (79), Expect = 0.040
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 181 LAISFLDRFLSICAVGKSQV---QLLGTACLLLASKLREPGSCALPADLLVF 229
LA+++LDRFLS + + QLL +CL LA+K+ E LP DL VF
Sbjct: 118 LAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEET-VVPLPMDLQVF 168
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 34.7 bits (76), Expect = 0.092
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 142 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDR-FLSIC 193
+ ++ T+Q I MR ++ +W++EV E+ E L ++++DR + IC
Sbjct: 162 STDFVETIQKNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRKYEEIC 214
>08_02_1018 +
23640889-23641245,23641868-23641954,23642063-23642161,
23642255-23642456,23642569-23642690,23642942-23643226
Length = 383
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 164 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQ---VQLLGTACLLLASKLRE 216
W+ EV LA+++LDRFLS + + + QLL ACL +A+K+ E
Sbjct: 116 WIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEE 171
>06_03_1476 -
30399317-30399347,30399636-30399722,30400035-30400192,
30400276-30400497,30400744-30400881,30400977-30401105,
30401346-30401369,30401569-30401614,30401692-30401773,
30401836-30401955,30402039-30402072
Length = 356
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 176 EEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSI 235
+E L ++ +DRFL+ V + ++QL+G +LLA K E S + DL++ +
Sbjct: 200 DETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEV-SVPVVEDLILI-CDRAY 257
Query: 236 TLTDL 240
T TD+
Sbjct: 258 TRTDI 262
>02_03_0032 +
14112354-14112417,14112471-14112549,14114435-14114551,
14114721-14114802,14115734-14115868,14115948-14116123,
14116219-14116370,14116433-14117622
Length = 664
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 151 TEITP-HMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLL 209
TEI +R+L ++ +V + AI F RF ++ K+ Q + T C+
Sbjct: 63 TEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIF 122
Query: 210 LASKLREPGSCALPADLLVFY 230
LASK+ E C L + V Y
Sbjct: 123 LASKV-EDTPCPLDQVIRVAY 142
>03_05_1133 - 30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 185 FLDRFL--SICAVGKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSITLTDLCR 242
++D F+ S+C + +QL L+ KL +P + Y A + DLC
Sbjct: 942 YIDLFMDPSLC---ECYLQLKEELDKLVQKKLEDPSFDIHKEGKYILYAAQELAAGDLCE 998
Query: 243 NATVFIGKGTARQRVSLNE 261
VF G+ T+R R+S ++
Sbjct: 999 GRFVF-GRETSRARLSSSD 1016
>12_02_0942 -
24653834-24654046,24654346-24654482,24654626-24654959,
24655067-24655153,24655254-24655580
Length = 365
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 159 RLVA-EWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQV----QLLGTACLLLASK 213
RL A +W+LE G LAI++ DRF V + + +LL AC+ +A+K
Sbjct: 100 RLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAK 159
Query: 214 LREPGSCAL 222
+ E S AL
Sbjct: 160 MEEYQSPAL 168
>02_04_0536 + 23730396-23731736
Length = 446
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 144 NYFGTVQT-EITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGK---SQ 199
+Y TVQ +I+ R + WM + A+S+ DRFLS+ A+ Q
Sbjct: 236 DYLDTVQGGQISAAARASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSVRALPSYTAHQ 295
Query: 200 VQLLGTACLLLASKLREPGS 219
+ L+ + A+K + G+
Sbjct: 296 LSLVAATAVYTAAKYEDQGT 315
>03_03_0222 -
15559996-15560188,15561120-15561150,15561645-15561701,
15563059-15563134,15563220-15563347,15563459-15563660,
15563781-15563879,15564032-15564124,15564539-15564877
Length = 405
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 181 LAISFLDRFLSICAVGKSQ-----VQLLGTACLLLASKLRE 216
LA+++LDRFLS + QLL ACL LA+K+ E
Sbjct: 127 LAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEE 167
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 9 PSNGRNLRAGLTGTALPPRRAAPIILLCSVGGRVSHRPLTATRALVVVA 57
P + LR G G A PP R AP + CSV L+A LV +A
Sbjct: 31 PPPPQRLRCGWVGRAAPPTRRAPGV--CSVVSPSKPGSLSAAPLLVCLA 77
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 179 FPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSITLT 238
FPL I L ++ K +++ +++ LR +C +PA+ + F ++ IT+
Sbjct: 207 FPLEIPLLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHACGMPAEDVDFINSDGITMN 266
Query: 239 DLCRNA----TVFIGKGTARQRVS 258
L A T+F G ++++
Sbjct: 267 KLLLEANPKMTLFTGSSRIAEKLA 290
>05_06_0106 -
25611239-25611295,25611388-25611477,25611582-25611669,
25611757-25611836,25611968-25612120,25612403-25612546,
25612633-25612884,25612985-25613116,25613207-25613287,
25613368-25613488,25613930-25614025,25614195-25614298,
25614481-25614567,25614690-25614803,25614871-25614930,
25615007-25615102,25615316-25615366,25615457-25615562,
25615642-25615713,25616117-25616172,25616446-25616508,
25616636-25616764
Length = 743
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 33 ILLCSVGGRVSHRPLTATRALVVVATLRATL 63
+LLC V GR S R A LV++ TL A L
Sbjct: 229 VLLCIVTGRYSSRLYIAYAPLVILGTLLAAL 259
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.135 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,686,264
Number of Sequences: 37544
Number of extensions: 335495
Number of successful extensions: 738
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 712
Number of HSP's gapped (non-prelim): 29
length of query: 301
length of database: 14,793,348
effective HSP length: 82
effective length of query: 219
effective length of database: 11,714,740
effective search space: 2565528060
effective search space used: 2565528060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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