GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001249-TA|BGIBMGA001249-PA|IPR007590|Protein of unknown
function DUF572
         (320 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)

Query: 4    RKVLNKYYPPDFDP 17
            RK L KY P D DP
Sbjct: 1411 RKGLGKYLPEDIDP 1424


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 168 DYEGMLRQYQPETVEERKAREEKEDNDFIKSVKFNNCSKK 207
           ++ G  ++   + + E+K   EKE+ + +K  K N+  K+
Sbjct: 42  NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKR 81


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 168 DYEGMLRQYQPETVEERKAREEKEDNDFIKSVKFNNCSKK 207
           ++ G  ++   + + E+K   EKE+ + +K  K N+  K+
Sbjct: 202 NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKR 241


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 168 DYEGMLRQYQPETVEERKAREEKEDNDFIKSVKFNNCSKK 207
           ++ G  ++   + + E+K   EKE+ + +K  K N+  K+
Sbjct: 202 NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKR 241


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.127    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,628
Number of Sequences: 317
Number of extensions: 2000
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 320
length of database: 114,650
effective HSP length: 57
effective length of query: 263
effective length of database: 96,581
effective search space: 25400803
effective search space used: 25400803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)