Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001249-TA|BGIBMGA001249-PA|IPR007590|Protein of unknown
function DUF572
(320 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain cont... 243 8e-64
BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain cont... 243 8e-64
AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein. 243 8e-64
AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens ... 241 3e-63
AK023988-1|BAB14757.1| 323|Homo sapiens protein ( Homo sapiens ... 237 4e-62
AC005578-3|AAC33489.1| 41|Homo sapiens F20887_2, partial CDS p... 83 1e-15
BC002905-1|AAH02905.1| 396|Homo sapiens coiled-coil domain cont... 80 1e-14
AF250306-1|AAK37425.1| 396|Homo sapiens putative SB115 protein ... 80 1e-14
AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens ... 33 1.3
>BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 243 bits (594), Expect = 8e-64
Identities = 126/273 (46%), Positives = 155/273 (56%), Gaps = 2/273 (0%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARK 60
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNMRC TCGEYIYKGKKFNARK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMXXXXXXXXXXX 120
E V+NE YLG+ I+RFYIKCTRCL EI+FKTDP+NTDY +E GATRNF
Sbjct: 61 ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120
Query: 121 XXXXXXXXXXNNPMKLLEYRTEQSXXXXXXXXXXXXXXXXXXXXXAVDYEGMLRQYQPET 180
NNPMK+LE RT+ S VD+E MLRQ++
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR--L 178
Query: 181 VEERKAREEKEDNDFIKSVKFNNCSKKXXXXXXXXXXXXXXXPPSKCSRIESLTQKTSDK 240
EE + R+++E+++ + K+ P R
Sbjct: 179 SEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAAPSPLQPALRPNPTAILDEAP 238
Query: 241 SDSIKKHSWNRSVGGLITKPALANLVRSKKPES 273
K W +SVG L ++P L+ LV KK ++
Sbjct: 239 KPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKA 271
>BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 243 bits (594), Expect = 8e-64
Identities = 126/273 (46%), Positives = 155/273 (56%), Gaps = 2/273 (0%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARK 60
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNMRC TCGEYIYKGKKFNARK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMXXXXXXXXXXX 120
E V+NE YLG+ I+RFYIKCTRCL EI+FKTDP+NTDY +E GATRNF
Sbjct: 61 ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120
Query: 121 XXXXXXXXXXNNPMKLLEYRTEQSXXXXXXXXXXXXXXXXXXXXXAVDYEGMLRQYQPET 180
NNPMK+LE RT+ S VD+E MLRQ++
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR--L 178
Query: 181 VEERKAREEKEDNDFIKSVKFNNCSKKXXXXXXXXXXXXXXXPPSKCSRIESLTQKTSDK 240
EE + R+++E+++ + K+ P R
Sbjct: 179 SEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAAPSPLQPALRPNPTAILDEAP 238
Query: 241 SDSIKKHSWNRSVGGLITKPALANLVRSKKPES 273
K W +SVG L ++P L+ LV KK ++
Sbjct: 239 KPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKA 271
>AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 243 bits (594), Expect = 8e-64
Identities = 126/273 (46%), Positives = 155/273 (56%), Gaps = 2/273 (0%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARK 60
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNMRC TCGEYIYKGKKFNARK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMXXXXXXXXXXX 120
E V+NE YLG+ I+RFYIKCTRCL EI+FKTDP+NTDY +E GATRNF
Sbjct: 61 ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120
Query: 121 XXXXXXXXXXNNPMKLLEYRTEQSXXXXXXXXXXXXXXXXXXXXXAVDYEGMLRQYQPET 180
NNPMK+LE RT+ S VD+E MLRQ++
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR--L 178
Query: 181 VEERKAREEKEDNDFIKSVKFNNCSKKXXXXXXXXXXXXXXXPPSKCSRIESLTQKTSDK 240
EE + R+++E+++ + K+ P R
Sbjct: 179 SEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAAPSPLQPALRPNPTAILDEAP 238
Query: 241 SDSIKKHSWNRSVGGLITKPALANLVRSKKPES 273
K W +SVG L ++P L+ LV KK ++
Sbjct: 239 KPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKA 271
>AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ10374 fis, clone NT2RM2001936, weakly similar to
32.3 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION. ).
Length = 323
Score = 241 bits (589), Expect = 3e-63
Identities = 125/273 (45%), Positives = 154/273 (56%), Gaps = 2/273 (0%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARK 60
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNMRC TCGEYIYKGKKFNARK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMXXXXXXXXXXX 120
E V+NE YLG+ I+RFYIKCTRCL EI+FKTDP+NTDY +E GA RNF
Sbjct: 61 ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGAARNFQAEKLLEEEEKR 120
Query: 121 XXXXXXXXXXNNPMKLLEYRTEQSXXXXXXXXXXXXXXXXXXXXXAVDYEGMLRQYQPET 180
NNPMK+LE RT+ S VD+E MLRQ++
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR--L 178
Query: 181 VEERKAREEKEDNDFIKSVKFNNCSKKXXXXXXXXXXXXXXXPPSKCSRIESLTQKTSDK 240
EE + R+++E+++ + K+ P R
Sbjct: 179 SEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAAPSPLQPALRPNPTAILDEAP 238
Query: 241 SDSIKKHSWNRSVGGLITKPALANLVRSKKPES 273
K W +SVG L ++P L+ LV KK ++
Sbjct: 239 KPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKA 271
>AK023988-1|BAB14757.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ13926 fis, clone Y79AA1000589, weakly similar to
32.3 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION. ).
Length = 323
Score = 237 bits (580), Expect = 4e-62
Identities = 125/273 (45%), Positives = 154/273 (56%), Gaps = 2/273 (0%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCATCGEYIYKGKKFNARK 60
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNMRC TCGEYIYKGKKFNARK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATRNFMXXXXXXXXXXX 120
E V+NE YLG+ I+RFYIKCTRCL EI+FKTDP+NTDY +E GATRNF
Sbjct: 61 ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120
Query: 121 XXXXXXXXXXNNPMKLLEYRTEQSXXXXXXXXXXXXXXXXXXXXXAVDYEGMLRQYQPET 180
NNPMK+LE RT+ S VD+E MLRQ++
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHR--L 178
Query: 181 VEERKAREEKEDNDFIKSVKFNNCSKKXXXXXXXXXXXXXXXPPSKCSRIESLTQKTSDK 240
EE + R+++E+++ + K+ P R
Sbjct: 179 SEEERRRQQQEEDEQETAALLEEARKRRLLEDSDSEDEAAPSPLQPALRPNPTAILDEAP 238
Query: 241 SDSIKKHSWNRSVGGLITKPALANLVRSKKPES 273
K +SVG L ++P L+ LV KK ++
Sbjct: 239 KPKRKVEVREQSVGSLGSRPPLSRLVVVKKAKA 271
>AC005578-3|AAC33489.1| 41|Homo sapiens F20887_2, partial CDS
protein.
Length = 41
Score = 83.4 bits (197), Expect = 1e-15
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNM 41
MSERKVLNKYYPPDFDPSKIP++KL K+RQY VRLMAPFNM
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNM 41
>BC002905-1|AAH02905.1| 396|Homo sapiens coiled-coil domain
containing 130 protein.
Length = 396
Score = 79.8 bits (188), Expect = 1e-14
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQ-------------YTVRLMAPFNMRCATCG 47
M ERK +NKYYPPDF+P K + N +R P+N+ C C
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 EYIYKGKKFNARKEDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATR 106
+I G ++NA K+ V N Y IYRF +KC C+ I +TDP N DY I +GA R
Sbjct: 61 NHIGMGVRYNAEKKKVGN--YYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQR 117
>AF250306-1|AAK37425.1| 396|Homo sapiens putative SB115 protein
protein.
Length = 396
Score = 79.8 bits (188), Expect = 1e-14
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQ-------------YTVRLMAPFNMRCATCG 47
M ERK +NKYYPPDF+P K + N +R P+N+ C C
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 EYIYKGKKFNARKEDVENEDYLGIRIYRFYIKCTRCLQEISFKTDPKNTDYEIEAGATR 106
+I G ++NA K+ V N Y IYRF +KC C+ I +TDP N DY I +GA R
Sbjct: 61 NHIGMGVRYNAEKKKVGN--YYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQR 117
>AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens
cDNA FLJ46156 fis, clone TESTI4001569. ).
Length = 1111
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 225 SKCSRIESLTQKTSDKSDSIKKHSWNRSVGGLITKPALANLVRSKKPESAETSKF 279
S+C RIE L QK D+ KH R LITK L V++ + ES S +
Sbjct: 519 SECPRIEFLQQKHKDEKKISLKHELFRHGILLITKVFLGQSVQAHEKESISQSNY 573
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.127 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,867,313
Number of Sequences: 224733
Number of extensions: 1129897
Number of successful extensions: 2583
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2556
Number of HSP's gapped (non-prelim): 11
length of query: 320
length of database: 73,234,838
effective HSP length: 90
effective length of query: 230
effective length of database: 53,008,868
effective search space: 12192039640
effective search space used: 12192039640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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