GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001248-TA|BGIBMGA001248-PA|undefined
         (698 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       28   0.25 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    28   0.25 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    28   0.25 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    26   1.0  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 370 QHKSAIQQLEEDLKQTKRALQEQCEITKREIELKERTETELQDSRNAIEE 419
           Q K   Q     LK+  RA++E  E  +RE E +ER + + Q+ +  IE+
Sbjct: 49  QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 98



 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 619 LEHRMRIVDEVNKQIAAKADEIQELFATLENKQQQIHR 656
           L+  +R V E+N+Q   + +E +      + KQQ+I +
Sbjct: 61  LKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 98


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 370 QHKSAIQQLEEDLKQTKRALQEQCEITKREIELKERTETELQDSRNAIEE 419
           Q K   Q     LK+  RA++E  E  +RE E +ER + + Q+ +  IE+
Sbjct: 200 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 249



 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 619 LEHRMRIVDEVNKQIAAKADEIQELFATLENKQQQIHR 656
           L+  +R V E+N+Q   + +E +      + KQQ+I +
Sbjct: 212 LKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 249


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 370 QHKSAIQQLEEDLKQTKRALQEQCEITKREIELKERTETELQDSRNAIEE 419
           Q K   Q     LK+  RA++E  E  +RE E +ER + + Q+ +  IE+
Sbjct: 259 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 308



 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 619 LEHRMRIVDEVNKQIAAKADEIQELFATLENKQQQIHR 656
           L+  +R V E+N+Q   + +E +      + KQQ+I +
Sbjct: 271 LKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQ 308


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 350 RDSLQAEVLECKQQIEKLTVQHKSAIQQLEEDLKQTKRALQEQCEITKREIEL 402
           ++ L  EV      IE +T+Q    ++ LE  LK+ +R L     + +R +E+
Sbjct: 19  QEKLYEEVAAVIDNIENITMQQLQEMKYLEMVLKEAQR-LYPSVPVIERRLEV 70


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.127    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,457
Number of Sequences: 317
Number of extensions: 4353
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 7
length of query: 698
length of database: 114,650
effective HSP length: 62
effective length of query: 636
effective length of database: 94,996
effective search space: 60417456
effective search space used: 60417456
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)