Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001246-TA|BGIBMGA001246-PA|IPR002223|Proteinase
inhibitor I2, Kunitz metazoa
(246 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0198 - 21158350-21159528 33 0.21
10_03_0014 - 7060587-7060730,7060813-7060981,7061444-7061613,706... 29 2.6
06_02_0084 - 11547820-11548773 29 2.6
04_03_0561 - 17188147-17188236,17188269-17188355,17188441-171884... 29 3.5
09_02_0563 - 10693152-10693589,10693789-10693951,10694090-10694337 29 4.6
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 29 4.6
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 29 4.6
01_07_0229 + 42161770-42164562 28 6.1
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 28 6.1
>11_06_0198 - 21158350-21159528
Length = 392
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Query: 110 NDNNFRDRDECLSVCHKNTSVGKKSESVSETRIKKMKATPSSD-DNEVMLNDKPTVRDSM 168
+D+N RD C C + KK + + E R + + + D D E + R
Sbjct: 159 DDDNHHGRDPCYKQCRHHHDQWKKQQCMEECRYHQRQQDAAVDVDEEDDNHGGDRCRKQC 218
Query: 169 KCATGPWLGWSNCVGDCNYAVRLNYRLVLSKDSGLGTSCRR 209
+ W C+ DC Y R +V +D CR+
Sbjct: 219 QHHHDQWKK-QQCIQDCRYHHRQEDDVVEEEDGHGDQQCRK 258
>10_03_0014 -
7060587-7060730,7060813-7060981,7061444-7061613,
7061701-7061879,7061978-7062043,7062394-7062567,
7062669-7062967,7063243-7063343,7063600-7063684,
7063797-7063947,7064267-7064451,7065599-7065786
Length = 636
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 112 NNFRDRDECLSVCHKNTSVGKKSESVSETRIKKMKATPSSDDNEVMLNDKPTVRDSMKCA 171
N + R E VCH +++ ++ +V E + K D + + L SM C
Sbjct: 13 NGYGSRREEDGVCHDDSATPVRANTVDELHSLQRKPQVVEDRHRLQLQSISASLASMTCG 72
Query: 172 TGPWL 176
GP L
Sbjct: 73 IGPKL 77
>06_02_0084 - 11547820-11548773
Length = 317
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 84 RRYQERWFFDWPRKSCEPFGYSGCGGNDNNFR 115
RR Q+R + R+ FG SGCGG D R
Sbjct: 57 RRRQQRLLWHRGRRYGGAFGSSGCGGGDRGHR 88
>04_03_0561 -
17188147-17188236,17188269-17188355,17188441-17188487,
17188670-17188740,17188898-17189346
Length = 247
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 77 PMSVGHCRRYQERWFFDWPRKSCEPFGYSGCGGNDNNFRDR 117
P S+ RR++ W R+ FG SGCGG D+ R R
Sbjct: 9 PRSLSQRRRHRLLWHGG--RRHDGAFGSSGCGGGDHGRRRR 47
>09_02_0563 - 10693152-10693589,10693789-10693951,10694090-10694337
Length = 282
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 179 SNCVGDCNYAVRLNYRLVLSKDSGLGTSCRRLVKSRSCRPVQCRN 223
S G C++ RL+ V+S SG SC ++ R CR CR+
Sbjct: 46 STQAGSCDWRRRLSRGAVVSVASG--RSCGGALRRRQCRLTPCRD 88
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 106 GCGGNDNNFRDRDECLSVCHKNTSVGKKSESVSETRIKKMKATPSSDDNEVMLNDK 161
G +D++FRDRD ++ N S + S +++ + T DD +V +D+
Sbjct: 595 GRDSDDDDFRDRDYDVAALANNLSQAFRYGIYSNDDMEENQGTLERDDEDVYFDDE 650
>01_01_0323 +
2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 81 GHCRRYQERWFFDWPRKSCEPFGYS 105
GHC Q FF + CEP+G++
Sbjct: 736 GHCSVVQTNEFFSQVLRGCEPYGFA 760
>01_07_0229 + 42161770-42164562
Length = 930
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 21 REVATENVTSEDPEIENLVEEHLERC 46
+E ATE V S D IE+L +E E C
Sbjct: 284 KEKATEEVISSDVRIESLAKEVAEEC 309
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 72 KICKLPMSVGHCRRYQERWFFDWPRKSC 99
K+CK+ S GH ++ + D PRK C
Sbjct: 97 KVCKVCKSTGHEAGFKGAVYIDCPRKPC 124
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,896,104
Number of Sequences: 37544
Number of extensions: 331019
Number of successful extensions: 819
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 811
Number of HSP's gapped (non-prelim): 10
length of query: 246
length of database: 14,793,348
effective HSP length: 80
effective length of query: 166
effective length of database: 11,789,828
effective search space: 1957111448
effective search space used: 1957111448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -