GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001246-TA|BGIBMGA001246-PA|IPR002223|Proteinase
inhibitor I2, Kunitz metazoa
         (246 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g26890.2 68416.m03365 expressed protein                             31   0.95 
At3g26890.1 68416.m03364 expressed protein                             31   0.95 
At1g32810.1 68414.m04044 expressed protein                             30   1.3  
At1g48540.2 68414.m05428 leucine-rich repeat family protein            28   6.7  
At1g48540.1 68414.m05427 leucine-rich repeat family protein            28   6.7  
At5g55660.1 68418.m06940 expressed protein similar to unknown pr...    27   8.9  
At5g22830.1 68418.m02669 magnesium transporter CorA-like family ...    27   8.9  
At1g50360.1 68414.m05645 myosin family protein contains Pfam pro...    27   8.9  

>At3g26890.2 68416.m03365 expressed protein
          Length = 649

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 184 DCNYAVRLNYRLVLSKDSGLGTSCRRLVKSRSCRPVQ 220
           D  YA+R  + +  S +S   + C+R ++S S RP+Q
Sbjct: 323 DDAYAIRRAFSMERSTESAPASPCKRFIRSLSGRPIQ 359


>At3g26890.1 68416.m03364 expressed protein
          Length = 649

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 184 DCNYAVRLNYRLVLSKDSGLGTSCRRLVKSRSCRPVQ 220
           D  YA+R  + +  S +S   + C+R ++S S RP+Q
Sbjct: 323 DDAYAIRRAFSMERSTESAPASPCKRFIRSLSGRPIQ 359


>At1g32810.1 68414.m04044 expressed protein
          Length = 654

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)

Query: 92  FDWPRKSCEPFGYSGCGGNDNNFRDRDECLSVCHKNTSVGKKSE-SVSETRIKKMKATPS 150
           F  P K C P  ++  G   N       C+     +++  K  + S S   I  +K  P 
Sbjct: 125 FQEPSKPCRPIPHTVSG---NGRPKMVVCIGKTSSSSATEKSPKPSTSRNSIPGLKQQPG 181

Query: 151 SDDNEVMLNDKPTV 164
            DDN+   ND+  V
Sbjct: 182 DDDNDANTNDEDCV 195


>At1g48540.2 68414.m05428 leucine-rich repeat family protein 
          Length = 1051

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 53  QEAFCDGEDRSCINFNDSSKICKLPMSVGHCRRYQE----RWFFDWPRKSCEPF 102
           + A CD E++  + FN  + I  L   V H ++ +     R F +W  +S E F
Sbjct: 387 ESATCDHENKENMKFNQEADIFGLISKVEHLKKERSVLWLREFKEWMDRSTEDF 440


>At1g48540.1 68414.m05427 leucine-rich repeat family protein 
          Length = 1063

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 53  QEAFCDGEDRSCINFNDSSKICKLPMSVGHCRRYQE----RWFFDWPRKSCEPF 102
           + A CD E++  + FN  + I  L   V H ++ +     R F +W  +S E F
Sbjct: 387 ESATCDHENKENMKFNQEADIFGLISKVEHLKKERSVLWLREFKEWMDRSTEDF 440


>At5g55660.1 68418.m06940 expressed protein similar to unknown
           protein (pir||T08929)
          Length = 778

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 110 NDNNFRDR--DECLSVCHKNTSVGKKSESVSETRIKKMKATPSSDDNE 155
           N+N   D+  DE   +     +V  + ES  ET+ KK  +  SSD  E
Sbjct: 552 NENGIPDKSEDEAPQLSESEENVESEEESEEETKKKKRGSRTSSDKKE 599


>At5g22830.1 68418.m02669 magnesium transporter CorA-like family
           protein weak similarity to SP|Q01926 RNA splicing
           protein MRS2, mitochondrial precursor {Saccharomyces
           cerevisiae}; contains Pfam profile PF01544: CorA-like
           Mg2+ transporter protein; supporting cDNA
           gi|12007446|gb|AF322255.1|AF322255
          Length = 459

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 31  EDPEIENLVEEHLERCQFTLTQQEAFCDG----EDRSCINFN 68
           E+ EIE L+E +L+RC+    Q E   D     ED   +N +
Sbjct: 345 EEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLS 386


>At1g50360.1 68414.m05645 myosin family protein contains Pfam
           profiles: PF00063 myosin head (motor domain), PF00612 IQ
           calmodulin-binding motif
          Length = 1153

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 39  VEEHLERCQFTLTQQEAFCDGEDRSCINFNDSSKICKL 76
           +++H  R  F L Q+E   DG D + ++F D+ +   L
Sbjct: 544 LQQHFNRHLFKLEQEEYIQDGIDWTRVDFEDNQECLSL 581


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.132    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,369,162
Number of Sequences: 28952
Number of extensions: 273617
Number of successful extensions: 747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 744
Number of HSP's gapped (non-prelim): 8
length of query: 246
length of database: 12,070,560
effective HSP length: 79
effective length of query: 167
effective length of database: 9,783,352
effective search space: 1633819784
effective search space used: 1633819784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)