Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001245-TA|BGIBMGA001245-PA|IPR000884|Thrombospondin,
type I, IPR002861|Reeler region, IPR009465|Spondin, N-terminal
(541 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 6e-38
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 54 4e-07
SB_12543| Best HMM Match : TSP_1 (HMM E-Value=1.4e-07) 42 0.001
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 38 0.015
SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 38 0.020
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.027
SB_50954| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.19
SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27) 35 0.19
SB_42731| Best HMM Match : fn3 (HMM E-Value=1.7e-26) 33 0.44
SB_18579| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_17144| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 33 0.58
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 33 0.77
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 32 1.0
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0) 32 1.0
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 32 1.0
SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 32 1.0
SB_36995| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 32 1.3
SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 32 1.3
SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 32 1.3
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10) 31 2.3
SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_8067| Best HMM Match : TSP_1 (HMM E-Value=1.1e-22) 31 3.1
SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019) 31 3.1
SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06) 30 4.1
SB_43945| Best HMM Match : TSP_1 (HMM E-Value=0.03) 30 5.4
SB_8177| Best HMM Match : TSP_1 (HMM E-Value=6e-38) 30 5.4
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 7.2
SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15) 29 7.2
SB_45420| Best HMM Match : TSP_1 (HMM E-Value=0.0024) 29 7.2
SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15) 29 7.2
SB_32913| Best HMM Match : TSP_1 (HMM E-Value=1.4e-16) 29 9.5
SB_22235| Best HMM Match : CP2 (HMM E-Value=1.1) 29 9.5
SB_2827| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18) 29 9.5
>SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 155 bits (377), Expect = 6e-38
Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 21/324 (6%)
Query: 172 EGMWSRNTHPREFPPENAHAHFGDIIGASHTAQYRVWQEGRVATTGLRRLADDGSTTALE 231
EG WS+ TH R P A + +IG SH+ +Y +W+ G +A+ ++ +++ G+T L+
Sbjct: 670 EGKWSQETHARHHP--GPMARWSPLIGCSHSNKYVMWRYGGIASRAVQMMSEWGATEYLD 727
Query: 232 KELKAESDDIRTIIKARGISWQQLTGTGIPSTFAVFRVDAKHHLVSLAAKLAPSPDWIVG 291
+E++ + +++ +II+ + W G+ + AVFRVD+ HL+S+ +++ PSPDW VG
Sbjct: 728 EEMRNQQENVMSIIQTPSL-WY-----GVGESSAVFRVDSTRHLLSMISRMIPSPDWNVG 781
Query: 292 VSALELCNVNCTWRTSASLSLYPYDAGTDNGISYTSRRMPTIPAAPVRALRTDWPRDVRS 351
V + LC NCTW+ ++ L P+DAGTD+GI++ S + P P+ + T R+
Sbjct: 782 VDRVNLCTTNCTWKHEETIDLIPWDAGTDDGITFKSPNARSTPKQPISRITTRLHDHPRA 841
Query: 352 PFF-STTGEMRPFARVRLTRLRLYEKSCDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPC 410
F+ +T ++RPFA ++L RL + C +N A + PC
Sbjct: 842 SFYLNTNDQIRPFASLKLERLAV-SGGCSNDAHIAPKNPYPPKSAPVGPRRDASTVYYPC 900
Query: 411 SVTSGAARASRQRDYVW-PARAHAEACRVQLTDYKHCHGPRMHC-RAVSEYEPDPAESSG 468
S A+ +V R H A QL R+ R+ + DP+
Sbjct: 901 S------SATMDSCFVLIRTRQHGIAGLPQLNFIGKKTAGRLRLERSALNHSSDPSRID- 953
Query: 469 PCAMSPWSEWSPCD-GCGVRARTR 491
C ++ WS+W+ C CGV + R
Sbjct: 954 -CQLTHWSKWTSCSVTCGVGEQIR 976
Score = 46.4 bits (105), Expect = 6e-05
Identities = 35/128 (27%), Positives = 47/128 (36%), Gaps = 18/128 (14%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C W W CSVT G R RD + C L +++ C R C
Sbjct: 954 CQLTHWSKWTSCSVTCGVGEQIRGRDIIRVPEHDGIPCP-NLYEHRPC--ARQRC----- 1005
Query: 459 YEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTRHYLAPRAYKRCHIGFRARTILSQAMP 517
S+ C ++PWS WS C G CGV + R R ++ + L +
Sbjct: 1006 ------SSTKKCEVTPWSAWSSCRGSCGVGRKVR---TRRIIRQSSLSGMTCPSLVKKRK 1056
Query: 518 CAEGPCEQ 525
C PC Q
Sbjct: 1057 CKLSPCRQ 1064
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 53.6 bits (123), Expect = 4e-07
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 19/124 (15%)
Query: 376 KSCDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEA 435
+ C P T++ E V + C W PW C+ T G R RD V P +
Sbjct: 819 RDCSELGPETEKKSCELVECSSHCTCGAWAPWSTCTATCGGGFQERTRDCV-PPKHGKMT 877
Query: 436 CRVQLTDYKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRH 492
C+ +L + + C P+P G A WS W+PC G G++ RTR+
Sbjct: 878 CQDELKETRLC-------------RPEPCPIDGKFA--EWSPWTPCSVSCGIGLKNRTRY 922
Query: 493 YLAP 496
P
Sbjct: 923 CAQP 926
Score = 39.5 bits (88), Expect = 0.007
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 18/120 (15%)
Query: 379 DVTEPGTDQNVQEGVGAGAWCATHG----WGPWGPCSVTSGAARASRQRDYVWPA-RAHA 433
DVT T + VQ + C +G + W PCS T G +R+R PA +
Sbjct: 463 DVTSC-TGERVQSRLCQSQHCPVNGNYTEFSEWTPCSTTCGVGIKTRKRSCTNPAPQFGG 521
Query: 434 EACRVQ--LTDYKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTR 491
++C+ Q + +H H R C Y P +PW+E S G G+R R R
Sbjct: 522 KSCQEQGMGLEVEHSHCYRRMCPIHGNYTP----------WTPWTECSKSCGPGIRTRER 571
Score = 37.5 bits (83), Expect = 0.027
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 20/98 (20%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPA-RAHAEACRVQLTDYKHCHGPRMHCR 454
G W A W WG CS + G + R R+ PA ++ + C HC
Sbjct: 1137 GKWGA---WSDWGSCSASCGPGKRIRTRECNDPAPKSGGKMCEGAKQQTGHC-------- 1185
Query: 455 AVSEYEPDPAESSGPCAMSPWSEWSPCD-GCGVRARTR 491
E+ P P + + WS+W+ CD CG TR
Sbjct: 1186 ---EFSPCPINGN----YTEWSKWTECDRPCGTGMMTR 1216
Score = 36.3 bits (80), Expect = 0.062
Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W PCSVT G R R P A +L GP ++ +
Sbjct: 788 WSLWTPCSVTCGVGIMERNRFCTNPPPALGGRDCSEL-------GPETEKKSC-----EL 835
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPC 518
E S C W+ WS C G G + RTR + P+ K T L + PC
Sbjct: 836 VECSSHCTCGAWAPWSTCTATCGGGFQERTRDCVPPKHGKMTCQDELKETRLCRPEPC 893
Score = 35.5 bits (78), Expect = 0.11
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W C G +R R P H QL DY GP +A + P
Sbjct: 1199 WSKWTECDRPCGTGMMTRWRSCANPIPQHGG----QLCDYI---GPDTERKACTF---GP 1248
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRH 492
++ G + S W+EWS C G GVR R+R+
Sbjct: 1249 CKTDG--SWSSWTEWSDCTQECGDGVRTRSRY 1278
Score = 33.9 bits (74), Expect = 0.33
Identities = 38/127 (29%), Positives = 48/127 (37%), Gaps = 24/127 (18%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAH-AEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
W W CS T G +R R P H + C + GPR+ + E D
Sbjct: 611 WSNWTSCSATCGEGTMTRSRLCDNPEPLHGGKDCSML--------GPRLEAKVCRMKECD 662
Query: 463 PAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP---RAYKRCHIGFRARTILSQAM 516
G A +PWS WS C G GV R R+ +P K C F T+ S
Sbjct: 663 ---VDG--AYNPWSAWSTCSVSCGGGVMFRHRNCTSPLPMHGGKDCS-AFGPSTMSSS-- 714
Query: 517 PCAEGPC 523
C + PC
Sbjct: 715 -CQDEPC 720
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CS + G R+R P A + A L GP + R + P
Sbjct: 233 WTEWNTCSTSCGGGTQERRRLCQNPTHAVSGADCSAL-------GPALETRECNA-RACP 284
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
+ A + WSEWS CD G GV+ R R +P
Sbjct: 285 IDG----AYNDWSEWSICDVTCGGGVQQRYRDCTSP 316
>SB_12543| Best HMM Match : TSP_1 (HMM E-Value=1.4e-07)
Length = 379
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 19/110 (17%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C W WG CS G R R PA D + C+ C V
Sbjct: 37 CDVSQWSSWGDCSSHCGGGTQIRTRRITTPASCGGGCPSYSFQDIRRCN---TQCCPVD- 92
Query: 459 YEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRA 508
CA WS+WSPC GCG ++R P Y++ G R+
Sbjct: 93 -----------CAFG-WSQWSPCVGCGKSTQSRF---PIVYRQPSCGGRS 127
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 41.9 bits (94), Expect = 0.001
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W WGPC+ T G R ++ A H C+ LT + C + C PD
Sbjct: 40 WSRWGPCNATCGPGVKMRTMNFTSFASPH---CQGSLTVVRKC--DNLCC-------PDH 87
Query: 464 AESSGPCAMSPWSEWSPCD-GC-GVRARTRHYLAPRAYKRCH 503
+++G + WS W PC+ C G+ RTR++ + +C+
Sbjct: 88 NDTTG---YTVWSAWGPCNRTCLGISERTRNFTNYLLHDKCN 126
Score = 32.7 bits (71), Expect = 0.77
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 471 AMSPWSEWSPCDGCGVRARTRHYL 494
A +PW W PC+ G + R R Y+
Sbjct: 204 AFNPWGPWGPCNSTGYKLRNRTYV 227
Score = 29.1 bits (62), Expect = 9.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 400 ATHGWGPWGPCSVT 413
A + WGPWGPC+ T
Sbjct: 204 AFNPWGPWGPCNST 217
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 38.3 bits (85), Expect = 0.015
Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 399 CATHG----WGPWGPCSVTSGAARASRQRDYVWPARAHAEA-CRVQLTDYKHCHGPRMHC 453
C HG W + CS+T G + R R+ P H + C V Y+ C
Sbjct: 556 CPIHGGYTSWTTFTTCSLTCGGGTSYRYRNCTNPIPRHGGSNCSVLGPAYEE-----NEC 610
Query: 454 RAVSEYEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAPRAY---KRC-HIGF 506
V P P + ++PWS +S CD G G + +TR P+ K C H+G
Sbjct: 611 NTV----PCPIDGG----LTPWSNYSQCDKSCGMGTKMKTRSCTNPKPQYGGKDCSHLGS 662
Query: 507 RARTILSQAMPC-AEGPCEQLVHFS 530
I PC +G + H+S
Sbjct: 663 LIYVINCNTHPCPIDGKYSKWSHYS 687
>SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1219
Score = 37.9 bits (84), Expect = 0.020
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 15/123 (12%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CSVT G R+R P ++ + L + + C + P+P
Sbjct: 201 WSKWTECSVTCGGGTRQRERSCTNPEPSNGGRDCLHLGESEETEA----CN--KDACPEP 254
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAE 520
A G S W++W+ C G G R R R P + G S+ C
Sbjct: 255 AVDGG---WSAWTKWTACTVTCGGGTRVRERSCTNPAPQGK---GKHCEGSASETRSCGN 308
Query: 521 GPC 523
PC
Sbjct: 309 DPC 311
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 37.5 bits (83), Expect = 0.027
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 399 CATHG----WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCR 454
C HG W W PCSV+ SR R P+ + K+C G + R
Sbjct: 616 CPVHGGWSEWTTWSPCSVSCSNGTISRTRHCSNPSPKYGG---------KNCSGVKNKRR 666
Query: 455 AVSEYEPDPAESSGPCAMSPWSEWSPCD-GC--GVRARTRHYLAPRAYKRCHIGFRARTI 511
++ P +G ++ WS WS C C G R R+R + +I R
Sbjct: 667 PCAQ---KPCLVNG--TLTNWSSWSLCSVSCSNGTRTRSRECVRKSTSPADYIA-RCIGE 720
Query: 512 LSQAMPCAEGPC 523
L+Q C EG C
Sbjct: 721 LNQTKHCFEGHC 732
Score = 34.3 bits (75), Expect = 0.25
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CSV+ + + R R+ + E RV +T C+G R + + P P
Sbjct: 794 WSNWTDCSVSCSSGQQVRYRECL------KENVRVNIT---KCNGTNAQSRTCA-FAPCP 843
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAPR 497
A S WS WS C G + R R+ PR
Sbjct: 844 VNG----AWSSWSAWSDCSKTCSIGEQIRMRNCTEPR 876
Score = 33.5 bits (73), Expect = 0.44
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAE---ACRVQLTDYKHCHGPRMHCRAVSEYE 460
W W CSV+ +R R+ V + + A+ C +L KHC HC E+
Sbjct: 682 WSSWSLCSVSCSNGTRTRSRECVRKSTSPADYIARCIGELNQTKHCF--EGHCPISGEW- 738
Query: 461 PDPAESSGPCAMSPWSEWSPC 481
S WSEWS C
Sbjct: 739 ------------STWSEWSSC 747
Score = 33.1 bits (72), Expect = 0.58
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 28/105 (26%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCH-GPRMHCR 454
G W A W W CSV+ G R R A ++ C T+ +C+ GP C
Sbjct: 440 GEWNA---WTSWSDCSVSCGVGARYRIR-----ACPDSQVCAGNATESSYCYLGP---CP 488
Query: 455 AVSEYEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
E+ PWS+WS C G G + RTR + P
Sbjct: 489 VDGEW-------------MPWSDWSECSHTCGNGSKVRTRTCVKP 520
Score = 32.7 bits (71), Expect = 0.77
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W PW PCS T G R R + +P L+ K+ G C+ S Y +
Sbjct: 962 WSPWTPCSATCGTGHQMRWR-FCFP-----------LSSSKNESG---ECKVKSPYRVES 1006
Query: 464 AES-SGPCAMSP-WSEWSPCDGC------GVRARTRHYLAPRAYKRC 502
PC S W+ W+ GC G++ R R+ L+ C
Sbjct: 1007 RFCFKSPCNYSSVWTSWTQWAGCSKPCTSGIQRRVRYCLSQAVGIEC 1053
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CSV+ G+ R R +++C + + K C + C A+ E
Sbjct: 904 WSNWTSCSVSCGSGVQVRTRSCEKAGNV-SDSCPGKNVEMKECI---VSCDALRSKE--- 956
Query: 464 AESSGPCAMSPWSEWSPCDG-CGVRARTR 491
PWS W+PC CG + R
Sbjct: 957 ------AKWMPWSPWTPCSATCGTGHQMR 979
Score = 30.3 bits (65), Expect = 4.1
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPD- 462
W W CS T G R R V P + ++ HG C +S D
Sbjct: 496 WSDWSECSHTCGNGSKVRTRTCVKPLYGGLKTRNRTCSNPSAKHGGSK-CTGLSRINEDC 554
Query: 463 ---PAE-SSGPCAMSPWSEWSPCDGCGVRARTR 491
P S G S WSE + G R+RTR
Sbjct: 555 NLAPCYLSKGWSGWSNWSECTRSCSNGTRSRTR 587
>SB_50954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 34.7 bits (76), Expect = 0.19
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARA-HAEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
W W CSVT SR R + P R ACR + ++C+ C+ +
Sbjct: 302 WSNWTTCSVTCSGGVQSRTRFCLNPFRGLDRPACRGDNREERNCN--NHPCKTTA----- 354
Query: 463 PAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
+ +G S WS W+ C+ G GV++R R P
Sbjct: 355 -TKLNG--GWSSWSNWTACNETCGGGVKSRNRTCTRP 388
Score = 29.5 bits (63), Expect = 7.2
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWP-ARAHAEACR-----VQLTDYKHCHGPRMHCRAVS 457
W PW PC+VT SR + + P R CR ++ + C G + V
Sbjct: 581 WSPWYPCNVTCPGRIQSRSKKCLDPEGRLDGSVCRGDDKMERVCNTNPCPGEYNNMERVC 640
Query: 458 EYEPDPAE 465
P P E
Sbjct: 641 NTSPCPGE 648
>SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27)
Length = 590
Score = 34.7 bits (76), Expect = 0.19
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARA-HAEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
W W CSVT SR R + P R ACR + ++C+ C+ +
Sbjct: 153 WSNWTTCSVTCSGGVQSRTRFCLNPFRGLDRPACRGDNREERNCN--NHPCKTTA----- 205
Query: 463 PAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
+ +G S WS W+ C+ G GV++R R P
Sbjct: 206 -TKLNG--GWSSWSNWTACNETCGGGVKSRNRTCTRP 239
>SB_42731| Best HMM Match : fn3 (HMM E-Value=1.7e-26)
Length = 671
Score = 33.5 bits (73), Expect = 0.44
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
WG W CS T G SR R + P + + R+ D + C G R S P
Sbjct: 252 WGEWSACSATCGDGTQSRDRTCIAPPPIYIKT-RLNGVDSRKCLGIRACPVPPSRITPGK 310
Query: 464 AESS 467
+ SS
Sbjct: 311 STSS 314
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 459 YEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
Y+PD E G + W EWS C G G ++R R +AP
Sbjct: 238 YKPD--ERYGVASPGAWGEWSACSATCGDGTQSRDRTCIAP 276
>SB_18579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 33.5 bits (73), Expect = 0.44
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 10/105 (9%)
Query: 399 CATHGWGPWGPCSVTSGAARAS-RQRDYVWPARAHAEAC---RVQLTDYKHCHGPRM--- 451
CA GWG W CS G+ R C R + CH M
Sbjct: 38 CAVSGWGEWSACSAPCGSTGTQFTTRTVTRQPACGGSPCPTLRKAQPCNRFCHNGGMPVP 97
Query: 452 -HCRAVSEYEPDPAESSGPCAMSPWSEWSPCD-GCGVRARTRHYL 494
C S Y E S W WS C CG +TR L
Sbjct: 98 NQCYCSSHYRGRCCEIVHG-GWSTWGSWSVCSKTCGTGTQTRDRL 141
>SB_17144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 33.5 bits (73), Expect = 0.44
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 444 KHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
K C GP + P P SPW WS CD G GVR RTR P
Sbjct: 18 KPCAGPTKQTIPCGKLPPCPLNGG----YSPWGAWSGCDADCGGGVRERTRFCTNP 69
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 33.5 bits (73), Expect = 0.44
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Query: 470 CAMSPWSEWSPCD---GCGVRARTRHYL---APRAYKRC 502
C +S WS WSPC G G+R R+R + + R K C
Sbjct: 513 CVVSTWSRWSPCSHRCGVGMRKRSRRVIVRPSQRGGKEC 551
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 33.1 bits (72), Expect = 0.58
Identities = 34/132 (25%), Positives = 47/132 (35%), Gaps = 17/132 (12%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRA 455
GAW + W CS + G SR R P AH K C G +A
Sbjct: 444 GAWS---DFSKWSTCSKSCGGGIMSRTRTCTNPKPAHGG---------KECEGDDKETKA 491
Query: 456 VSEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQA 515
P P + G S WS + G G+ +RTR P K + G + ++
Sbjct: 492 CG-ISPCPV-NGGWSDFSKWSSCTKSCGGGIMSRTRTCTNP---KPANGGQECKGDETET 546
Query: 516 MPCAEGPCEQLV 527
C CE ++
Sbjct: 547 KACGTKKCEVII 558
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 386 DQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKH 445
D + G G G WC W W CS +R R +P+ CR +
Sbjct: 657 DDDDDNGGGGGDWCRYWPWSAWSACSSKCSYGSQTRTRQANYPS-----FCR-HTWQTRQ 710
Query: 446 CHGPR 450
C GP+
Sbjct: 711 CGGPK 715
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 32.3 bits (70), Expect = 1.0
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 14/79 (17%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAH-AEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
WG W CS T G + R+R P R E C D K C + C PD
Sbjct: 276 WGAWAECSKTCGPGKLIRRRKCDNPKRRFGGEKCEGDRKDVKPCQIRK--C-------PD 326
Query: 463 PAESSGPCAMSPWSEWSPC 481
+ W EWS C
Sbjct: 327 AVNGN----WGDWGEWSEC 341
>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 675
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQ 422
CA G W CSVT G+ +ASRQ
Sbjct: 361 CAEWNVGAWSQCSVTCGSGKASRQ 384
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 32.3 bits (70), Expect = 1.0
Identities = 33/135 (24%), Positives = 46/135 (34%), Gaps = 16/135 (11%)
Query: 399 CATHGWGPWGPCSVTSG-AARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVS 457
CA W WGPC+ G A +R R C ++ + C+ R CR
Sbjct: 93 CAVSAWSSWGPCTHQCGNAGTQTRTRTKTVSEACPGGRCPYHFSESQACN--RNACRNGG 150
Query: 458 EYEPD----PAESSGPCAMSPWSEWSPCD----GCGVRARTRHYLAPRAYKRCHIGFRAR 509
A +G C +S C G R RTR P ++C +
Sbjct: 151 TPHAGRCGCRAGFTGTCCEHVGGAYSDCSHQCGNSGTRTRTRRVTEP---QKC--DGKCP 205
Query: 510 TILSQAMPCAEGPCE 524
LS+ + C CE
Sbjct: 206 FHLSETIACNRNACE 220
>SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 32.3 bits (70), Expect = 1.0
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
WG +G C + G +R+R+ PA A+ K C GP + + +P P
Sbjct: 288 WGLFGDCDKSCGGGARTRKRECTNPAPAYGG---------KQCDGPHTDTMSCNS-QPCP 337
Query: 464 AESSGPCAMSPWSEWSPCD-----GCGVRARTR 491
S W+E+S C+ G G + RTR
Sbjct: 338 VNG----GYSQWTEFSACELKASCGEGKKIRTR 366
>SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 32.3 bits (70), Expect = 1.0
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 15/92 (16%)
Query: 403 GWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
GW WG S S A + +RQR C + + K C G ++ E + D
Sbjct: 283 GWSNWGTFSPCSPACKKNRQR-----------FCTAEDRETK-CPGANVYGIGTEEIQCD 330
Query: 463 PAESSGPC--AMSPWSEWSPCD-GCGVRARTR 491
E P WS W C CG + TR
Sbjct: 331 NKECYAPVDGHWGRWSSWGACSKTCGYKQHTR 362
>SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 468
Score = 32.3 bits (70), Expect = 1.0
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 14/79 (17%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAH-AEACRVQLTDYKHCHGPRMHCRAVSEYEPD 462
WG W CS T G + R+R P R E C D K C + C PD
Sbjct: 232 WGAWAECSKTCGPGKLIRRRKCDNPKRRFGGEKCEGDRKDVKPCQIRK--C-------PD 282
Query: 463 PAESSGPCAMSPWSEWSPC 481
+ W EWS C
Sbjct: 283 AVNGN----WGDWGEWSEC 297
>SB_36995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 473 SPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPCEQLVHFSWN 532
S WSE++PC+ V++R R A + ++ G + + +Q + C+ C V W
Sbjct: 214 SAWSEFTPCNIRCVKSRQRVCFA--SDRQACPGVTSSNVKTQRVRCSPAECYAPVQGHWG 271
Query: 533 KLRRYPT 539
+ R+ T
Sbjct: 272 RWARWST 278
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 464 AESSGPCAMSPWSEWSPC-DGCGVRA 488
++ PC +S WS+WS C CG +A
Sbjct: 163 SDDGNPCKVSDWSKWSVCSQSCGAQA 188
>SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 366
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 464 AESSGPCAMSPWSEWSPC-DGCGVRA 488
++ PC +S WS+WS C CG +A
Sbjct: 163 SDDGNPCKVSDWSKWSVCSQSCGAQA 188
>SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CS G +R R+ PA A + +C G M E EP
Sbjct: 181 WSSWSNCSSKCGIGTHNRTRNCTNPAPAFGGS---------NCSGNTM------ETEPCD 225
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
S + WS WS C G G +ARTR+ P
Sbjct: 226 NLCSVNGGYTAWSNWSACPVTCGAGSQARTRNCSNP 261
>SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W W CS G +R R+ PA A + +C G M E EP
Sbjct: 204 WSSWSNCSSKCGIGTHNRTRNCTNPAPAFGGS---------NCSGNTM------ETEPCD 248
Query: 464 AESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
S + WS WS C G G +ARTR+ P
Sbjct: 249 NLCSVNGGYTAWSNWSACPVTCGAGSQARTRNCSNP 284
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 470 CAMSPWSEWSP---CDGCGVRARTRHYLAP 496
C M+ W+ WS +GC V+AR R Y++P
Sbjct: 391 CDMNDWTSWSEDVTSEGCKVQARIRTYVSP 420
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 470 CAMSPWSEWSPCD----GCGVRARTRHYLAPRAY 499
C + WSEWS D C + RT+ Y + A+
Sbjct: 509 CKLGEWSEWSGADITSGSCNEQTRTKAYTSTEAF 542
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 31.1 bits (67), Expect = 2.3
Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 13/124 (10%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEA-CRVQLTDYKHCHGPRMHCRAVSEYEPD 462
W W PC VT G A R R+ P + A C +D + C P
Sbjct: 320 WSDWSPCPVTCGGAMQLRTRNCSSPKPLNGGADCSSLGSDIESRDCNTNPC-------PG 372
Query: 463 PAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAPRAY---KRCHIGFRARTILSQAMPCA 519
+ G S W+E S G G + R R P K C I + + M C
Sbjct: 373 DTVNGGYSEWSAWTECSATCGGGTQMRNRKCNNPNPQNGGKNC-IDMGLGSEIESRM-CN 430
Query: 520 EGPC 523
+ PC
Sbjct: 431 QNPC 434
>SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10)
Length = 718
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 389 VQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWP 428
++EGV G W W W CSVT G+ R R V P
Sbjct: 344 LREGVIHGGWT---NWAAWSQCSVTQGSGFRVRTRACVNP 380
>SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 31.1 bits (67), Expect = 2.3
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 178 NTHPREFPPENAHAHFGDIIGASHTAQYRVWQEGRVATTGLRRLADDGSTTALEKELKAE 237
+ H R E+ H HF +GA+HT RV +E R+ R A D + A + KA
Sbjct: 131 DAHHRRLLEEHFH-HFSKAMGAAHTLNKRVSEENRIT-----RDARDMNNNACDINAKAR 184
Query: 238 SDDIRTIIKARGI-SWQQLTGTGIPSTFAV--FRVD 270
D A G+ S Q+ G P+ + FRVD
Sbjct: 185 DCD----AAACGLHSKTQVPGVHTPNDIMMTSFRVD 216
>SB_8067| Best HMM Match : TSP_1 (HMM E-Value=1.1e-22)
Length = 869
Score = 30.7 bits (66), Expect = 3.1
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 11/114 (9%)
Query: 378 CDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACR 437
C+ +P + Q + A +W T W PCS T G + S+ R V A + +
Sbjct: 542 CEDAKPASTQECEIAPCAASWYKTE----WNPCSATCG--KGSQSRSVVCRREIFAGSNQ 595
Query: 438 VQLTDYKHCHGPRMHCRAVSE-YEPDPAESSGPCAMSPWSEWSPCDGCGVRART 490
+ C G + E Y+ PAE + WS S G + RT
Sbjct: 596 YKTLPDSSCTGSKPALSQKCENYDNCPAE----WVATEWSACSQTCAGGQQTRT 645
>SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019)
Length = 1234
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 435 ACRVQLTDYKH-CHGPRMHCRAVSEYEPDPAES---SGPCAMSPWSEWSPCDGCGVRART 490
A V +T K+ C G C + E E + + C WSEWS G +R RT
Sbjct: 675 AMTVSVTVQKYDCSGLPQSCPNLPETEKRTTDCPCRAVKCDWEAWSEWSASCGLAIRTRT 734
Query: 491 RHYLAPRA 498
L RA
Sbjct: 735 IKDLIQRA 742
>SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06)
Length = 169
Score = 30.3 bits (65), Expect = 4.1
Identities = 22/65 (33%), Positives = 26/65 (40%)
Query: 472 MSPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPCEQLVHFSW 531
M P SP DGCG+ LA +R R RT+ S Q HF
Sbjct: 73 MPPNVSRSPFDGCGMYGDINDVLAAEYRRRGDKRRRCRTVFSTEQLAILEEGFQKQHFPD 132
Query: 532 NKLRR 536
NKLR+
Sbjct: 133 NKLRQ 137
>SB_43945| Best HMM Match : TSP_1 (HMM E-Value=0.03)
Length = 407
Score = 29.9 bits (64), Expect = 5.4
Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
WG WG S G + RQR V + + + C G C E E +
Sbjct: 280 WGAWGNWSGLCGTVK--RQRKIVQTDK---------VVQKESCDGLPTKCTQTPEEETNT 328
Query: 464 AESSGPC------AMSPWSEWSPCDGCGVRARTRH 492
C SPWS WS CG RTR+
Sbjct: 329 LPDCEQCFTVDCTVFSPWSAWSAT--CGPATRTRN 361
>SB_8177| Best HMM Match : TSP_1 (HMM E-Value=6e-38)
Length = 950
Score = 29.9 bits (64), Expect = 5.4
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 473 SPWSEWSPCDG-CG--VRARTRHYLAPRAY---KRCHIGFRARTILSQAMPCAEGPCEQL 526
S WS+WS CD CG V RTR P K C G +T L PC GP +
Sbjct: 79 SEWSQWSLCDNPCGGSVVNRTRTCTNPTPTPDGKPCK-GDYLQTKLECIAPCKVGPVDGR 137
Query: 527 VHFSWNKLRRYPTA 540
W+ R P A
Sbjct: 138 -WSDWSAWSRCPQA 150
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAH 432
W P+ PCS T G R R+R P+ H
Sbjct: 496 WAPFSPCSATCGGGRMVRRRYCDNPSPQH 524
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 134 VLARKICPTSAGPSSLNRQPPIVEPC--CACDEAKY 167
V +R CPT+ GPS+ + P V+PC CD Y
Sbjct: 5333 VASRGSCPTT-GPSTASPVPTTVDPCSGVTCDSPPY 5367
>SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 157
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 466 SSGPCAMSPWSEWSPCDG--CGVRARTRHYLAPRAYK-RCHIGFRARTILSQAMPCAEGP 522
SSG CA S + PCD C A + Y C GF +Q PC P
Sbjct: 67 SSGTCANS--ARVKPCDSSPCQNNATCTNKEDNSGYNCTCSTGFTGSDCETQVKPCGSSP 124
Query: 523 CE 524
C+
Sbjct: 125 CK 126
>SB_45420| Best HMM Match : TSP_1 (HMM E-Value=0.0024)
Length = 426
Score = 29.5 bits (63), Expect = 7.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 473 SPWSEWSPCDGCGVRARTRH 492
S W EW C G+++R RH
Sbjct: 150 SKWGEWGECSAEGIKSRLRH 169
>SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 186
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 466 SSGPCAMSPWSEWSPCDG--CGVRARTRHYLAPRAYK-RCHIGFRARTILSQAMPCAEGP 522
SSG CA S + PCD C A + Y C GF +Q PC P
Sbjct: 67 SSGTCANS--ARVKPCDSSPCQNNATCTNKEDNSGYNCTCSTGFTGSDCETQVKPCGSSP 124
Query: 523 CE 524
C+
Sbjct: 125 CK 126
>SB_32913| Best HMM Match : TSP_1 (HMM E-Value=1.4e-16)
Length = 491
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Query: 375 EKSCDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASR 421
E C ++P +Q + +W T W PCS T G SR
Sbjct: 397 ESLCAGSKPAANQECETAKCVSSWYTTE----WSPCSATCGKGTQSR 439
>SB_22235| Best HMM Match : CP2 (HMM E-Value=1.1)
Length = 284
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 45 AEVASDFSKDETEQGDLRATADPHQPLGVFQAYDAQTKLHESCAPAVDNATAHP-KTEVQ 103
A V+ S++E QG ++ T H +GVF++ +A K+H + AP+ + A E Q
Sbjct: 124 ASVSVVASENENPQG-MKNTTSGH--VGVFKSREASRKVHPAKAPSKEPQQAEEYDGEEQ 180
Query: 104 VIW 106
V W
Sbjct: 181 VKW 183
>SB_2827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 29.1 bits (62), Expect = 9.5
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 11/122 (9%)
Query: 402 HGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEP 461
HGW W SR+R Y + H+ + Q + +G R +E E
Sbjct: 230 HGWSKWSDFLPCDKDGYKSRER-YCY----HSGDAKRQCGGNVNVYGIERDVRKCTEAEK 284
Query: 462 DPAESSGPCAMSPWSEWSPCD-GC--GVRARTR--HYLAPRAYKRCHIGFRARTILSQAM 516
A + WSEWS C C GV++R R + AP Y + G +T +
Sbjct: 285 R-ARDAIDGNWGRWSEWSSCSVTCDNGVQSRHRSCNAPAPSKYGKTCAGSNKQTAVCTVR 343
Query: 517 PC 518
C
Sbjct: 344 RC 345
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 219 RRLADDGSTTALEKELKAESDDIRTIIKARGISWQQLTGTGIPSTFAV 266
RR+ D T EK + I+ I+K R + Q +GTG +TF++
Sbjct: 7 RRVVTD-ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSI 53
>SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18)
Length = 465
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 384 GTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQR 423
G + N + G W WGPW CS + G SR+R
Sbjct: 165 GPETNYIYRIVDGKWSP---WGPWTKCSKSCGTGFKSRER 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.132 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,896,169
Number of Sequences: 59808
Number of extensions: 845234
Number of successful extensions: 1889
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1762
Number of HSP's gapped (non-prelim): 131
length of query: 541
length of database: 16,821,457
effective HSP length: 86
effective length of query: 455
effective length of database: 11,677,969
effective search space: 5313475895
effective search space used: 5313475895
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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