Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001245-TA|BGIBMGA001245-PA|IPR000884|Thrombospondin,
type I, IPR002861|Reeler region, IPR009465|Spondin, N-terminal
(541 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 241 7e-64
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 45 2e-04
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 43 6e-04
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z50004-3|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 42 8e-04
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 37 0.041
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 37 0.041
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 37 0.041
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 37 0.041
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 36 0.096
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 36 0.096
AL032623-5|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical ... 33 0.51
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 32 0.89
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 32 0.89
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 31 2.1
U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical pr... 31 2.1
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 31 2.1
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 30 4.8
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 30 4.8
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 29 8.3
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 241 bits (591), Expect = 7e-64
Identities = 142/419 (33%), Positives = 214/419 (51%), Gaps = 28/419 (6%)
Query: 91 VDNATAHPKTEVQVIWNAPLSVRGVCVRLSARVGPT--LTANKWSVLARKICPTSAGPSS 148
V +A KT V ++W AP V CV A V T + + L K+C G
Sbjct: 123 VSHANLKSKTSVHMMWKAP-EVSSGCVVFRASVIETKYIWFTEAEGLTVKLC-IQKGTQI 180
Query: 149 LNRQPPIVEPCCACDEAKYEVNFEGMWSRNTHPREFPPENAHAHFGDIIGASHTAQYRVW 208
L CCACD A+Y++ F G+WS+NTHP+++P HF D++G+SH++ Y +W
Sbjct: 181 LKPVDDPSATCCACDIAQYDLEFTGIWSKNTHPKDYPTLEHLTHFTDMLGSSHSSNYSLW 240
Query: 209 QEGRVATTGLRRLADDGSTTALEKELKAESDDIRTIIKARGISWQQLTGTGIPSTFAVFR 268
G ++T G++ +A+ G+T E E KA++ ++R+++K +G+ + + GT T + F
Sbjct: 241 TIGGISTDGMKEIAEWGNTYKAEAEAKAKASEVRSLMKVKGLWFPDVQGT----TKSQFV 296
Query: 269 VDAKHHLVSLAAKLAPSPDWIVGVSALELCNVNCTWRTSASLSLYPYDAGTDNGISYTSR 328
V+ HH VSLA PSPDW VG+S++ LC +CTW + L P+DAGTD+G +Y S
Sbjct: 297 VNKYHHFVSLATMFGPSPDWCVGLSSVNLCLPDCTWAEERTFELQPFDAGTDSGPTYMSP 356
Query: 329 RMPTIPAAPVRALRTDWPRDVRSPFFSTTGEMRP-FARVRLTRLRLYEKSC---DVTEPG 384
PT P P+ + T + SPF+++ + P A+V L R + C D+ +
Sbjct: 357 NEPTEPREPIHWITT--KLNPLSPFYNSKSDTIPTLAKVILRRKNVTSSECKSDDILKAE 414
Query: 385 ----TDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQL 440
T+ + E C W PW CS T G R R YV+P +A C Q
Sbjct: 415 AHNITNTSEDEEYKDRRECMMTQWEPWSLCSATCGKGIRIRSRVYVFPIKAQVFHCHRQT 474
Query: 441 TDYKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCD---GCGVRARTRHYLAP 496
T+ + C+ ++E E A SS C +S W W C G G+R+R R +L P
Sbjct: 475 TEKQFCNA------KINECENSEAFSS-KCQVSSWGSWGECSVQCGHGMRSRNRTFLNP 526
Score = 63.7 bits (148), Expect = 3e-10
Identities = 41/115 (35%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C WG WG CSV G SR R ++ PA + C V L C G V+
Sbjct: 497 CQVSSWGSWGECSVQCGHGMRSRNRTFLNPATKSGD-CSVDLERKDICVGENGDDCNVT- 554
Query: 459 YEPDPAESSGPCAMSPWSEWSPCD-GC--GVRARTRHYLAPRAYKRC-HIGFRAR 509
PDP C + WS+WSPC C GVR RTR + KRC H+ + +
Sbjct: 555 --PDPL-----CKTTAWSDWSPCSASCDEGVRVRTRLFFYSEHEKRCMHVNLQEK 602
Score = 54.4 bits (125), Expect = 2e-07
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C W WG CSV+ G + SR R V AR C L + CR
Sbjct: 706 CEVSKWTAWGSCSVSCGRGKKSRSRHVVKLARNGGHQCSEHLMQ-------ELQCR---- 754
Query: 459 YEPDPAESSGPCAMSPWSEWSPCD-GCGVRARTRHYLAPRA 498
P P + + C + PWS WSPC CG ++TR RA
Sbjct: 755 LRPCPVKLT--CQVGPWSRWSPCSVSCGEGSQTRRRRVVRA 793
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 44.8 bits (101), Expect = 2e-04
Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 42/142 (29%)
Query: 389 VQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHG 448
V V +G W H W W CS T G SR+R+ C +C G
Sbjct: 449 VNPPVVSGVW---HDWSDWSTCSCTCGDGAKSRRRE-----------CSTN-----NCQG 489
Query: 449 PRMHCRAVSEYEPDPAESSGPC-AMSPWSEWSPCD---GCGVRARTRHYLAPRAYKRCHI 504
++YE +P + GPC S W EWS C G G R RTR CH+
Sbjct: 490 --------ADYETEPC-NLGPCQTWSEWCEWSTCSASCGSGQRERTRF---------CHL 531
Query: 505 GF-RARTILSQAMPCAEGPCEQ 525
G R ++ C+ GPC +
Sbjct: 532 GTNRCEGKDYESEQCSAGPCPE 553
Score = 43.6 bits (98), Expect = 4e-04
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 24/92 (26%)
Query: 404 WGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSEYEPDP 463
W WG CSVT G A RQR C + C GP+ RA
Sbjct: 557 WEDWGQCSVTCGQGVAVRQR-----------TCLGGVFGDHLCQGPKTEQRACD------ 599
Query: 464 AESSGPCAM-SPWSEWSPCD---GCGVRARTR 491
GPC++ SPW EWS C G G++ R R
Sbjct: 600 ---GGPCSLWSPWQEWSTCSASCGSGMKRRQR 628
Score = 38.3 bits (85), Expect = 0.014
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 21/114 (18%)
Query: 383 PGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTD 442
P + + EG W W W C G ++ R R + A + +C
Sbjct: 692 PSIETTLCEGQSCCNWSE---WCHWSMCDKECGGGQSIRTRTCLNSAGSPDSSC------ 742
Query: 443 YKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCD---GC--GVRARTR 491
HC GP E E + + CA + W EWSPC C GV++R+R
Sbjct: 743 --HCDGPDRE-----EKECNSQSCAPQCAWNTWCEWSPCSTQLACEVGVQSRSR 789
Score = 35.9 bits (79), Expect = 0.072
Identities = 42/142 (29%), Positives = 51/142 (35%), Gaps = 34/142 (23%)
Query: 383 PGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTD 442
P T+Q +G W W W CS + G+ RQR C+ TD
Sbjct: 591 PKTEQRACDGGPCSLWSP---WQEWSTCSASCGSGMKRRQR-----------VCQFG-TD 635
Query: 443 YKHCHGPRMHCRAVSEYEPDPAESSGPCA-MSPWSEWSPCD---GCGVRARTRHYLAPRA 498
C GP + Y P PCA + W EWS C G G R RTR L P
Sbjct: 636 ---CQGPNEESQFC--YGP-------PCAEWTEWCEWSGCSSKCGPGQRTRTRGCLGPNG 683
Query: 499 YK--RCHIGFRARTILSQAMPC 518
+ C G T L + C
Sbjct: 684 QEATTCQ-GPSIETTLCEGQSC 704
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 42.7 bits (96), Expect = 6e-04
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 376 KSCDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEA 435
+ C T P Q+ +E W W W CSV G R+R A
Sbjct: 748 QECAETGPCVMQSCREN--KNTWTE---WSQWSDCSVNCGEGVQFRKR------ACFAAF 796
Query: 436 CRVQLTDYKHCHGPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPCD-GCGVRARTR 491
CR + +D ++C+G R C + P SG + WS WS C CG+ RTR
Sbjct: 797 CRGKDSDVRNCYGQR--CSETTTRRP-LVNRSG--LWTGWSSWSSCSTKCGIGQRTR 848
Score = 33.1 bits (72), Expect = 0.51
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 404 WGPWGPCSVTSGAARASRQRD 424
WGPW CSVT G + R+R+
Sbjct: 723 WGPWSACSVTCGTGQKLRRRE 743
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 8e-04
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 27/136 (19%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C + WG W PCSV+ G R+R L D + C R ++
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRER----------------LCDGELCATANKQARTCNQ 894
Query: 459 YEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTRHYLAPRAYKRCHIGFRARTILSQAMP 517
+ A S S W EW+ C CG ++R + C G SQ
Sbjct: 895 QQCPSAFSLS--VWSEWGEWTTCSATCGEGLQSRE-------RSCRRGSCTEDDASQTRR 945
Query: 518 CAEGPCEQLVHFSWNK 533
C GPCE + +W++
Sbjct: 946 CVNGPCEH-SYLTWSE 960
Score = 37.9 bits (84), Expect = 0.018
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 17/97 (17%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRA 455
G W W W PCS + G +R R P ++C C P
Sbjct: 1325 GGWST---WSDWTPCSASCGFGVQTRDRSCSSPEPKGGQSCSGLAHQTSLCDLP------ 1375
Query: 456 VSEYEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTR 491
++E D S W+EWS C G CG+ RTR
Sbjct: 1376 ACDHESDG-------EWSAWNEWSGCMGNCGIGTRTR 1405
Score = 33.5 bits (73), Expect = 0.39
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 404 WGPWGPCSVTSGAARASRQR 423
W WGPCSVT G+ R R R
Sbjct: 1041 WSEWGPCSVTCGSGRRVRTR 1060
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 473 SPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPC 523
S WS WS C + + R + + GF A IL Q +PCA G C
Sbjct: 1152 SEWSSWSACSCFSLTSTRRRFC--QVVDPTVQGFCAGAILEQ-IPCAPGSC 1199
>Z50004-3|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 8e-04
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 27/136 (19%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C + WG W PCSV+ G R+R L D + C R ++
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRER----------------LCDGELCATANKQARTCNQ 894
Query: 459 YEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTRHYLAPRAYKRCHIGFRARTILSQAMP 517
+ A S S W EW+ C CG ++R + C G SQ
Sbjct: 895 QQCPSAFSLS--VWSEWGEWTTCSATCGEGLQSRE-------RSCRRGSCTEDDASQTRR 945
Query: 518 CAEGPCEQLVHFSWNK 533
C GPCE + +W++
Sbjct: 946 CVNGPCEH-SYLTWSE 960
Score = 37.9 bits (84), Expect = 0.018
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 17/97 (17%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRA 455
G W W W PCS + G +R R P ++C C P
Sbjct: 1325 GGWST---WSDWTPCSASCGFGVQTRDRSCSSPEPKGGQSCSGLAHQTSLCDLP------ 1375
Query: 456 VSEYEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTR 491
++E D S W+EWS C G CG+ RTR
Sbjct: 1376 ACDHESDG-------EWSAWNEWSGCMGNCGIGTRTR 1405
Score = 33.5 bits (73), Expect = 0.39
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 404 WGPWGPCSVTSGAARASRQR 423
W WGPCSVT G+ R R R
Sbjct: 1041 WSEWGPCSVTCGSGRRVRTR 1060
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 473 SPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPC 523
S WS WS C + + R + + GF A IL Q +PCA G C
Sbjct: 1152 SEWSSWSACSCFSLTSTRRRFC--QVVDPTVQGFCAGAILEQ-IPCAPGSC 1199
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 8e-04
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 27/136 (19%)
Query: 399 CATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRAVSE 458
C + WG W PCSV+ G R+R L D + C R ++
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRER----------------LCDGELCATANKQARTCNQ 894
Query: 459 YEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTRHYLAPRAYKRCHIGFRARTILSQAMP 517
+ A S S W EW+ C CG ++R + C G SQ
Sbjct: 895 QQCPSAFSLS--VWSEWGEWTTCSATCGEGLQSRE-------RSCRRGSCTEDDASQTRR 945
Query: 518 CAEGPCEQLVHFSWNK 533
C GPCE + +W++
Sbjct: 946 CVNGPCEH-SYLTWSE 960
Score = 37.9 bits (84), Expect = 0.018
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 17/97 (17%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHCHGPRMHCRA 455
G W W W PCS + G +R R P ++C C P
Sbjct: 1325 GGWST---WSDWTPCSASCGFGVQTRDRSCSSPEPKGGQSCSGLAHQTSLCDLP------ 1375
Query: 456 VSEYEPDPAESSGPCAMSPWSEWSPCDG-CGVRARTR 491
++E D S W+EWS C G CG+ RTR
Sbjct: 1376 ACDHESDG-------EWSAWNEWSGCMGNCGIGTRTR 1405
Score = 33.5 bits (73), Expect = 0.39
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 404 WGPWGPCSVTSGAARASRQR 423
W WGPCSVT G+ R R R
Sbjct: 1041 WSEWGPCSVTCGSGRRVRTR 1060
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 473 SPWSEWSPCDGCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPC 523
S WS WS C + + R + + GF A IL Q +PCA G C
Sbjct: 1152 SEWSSWSACSCFSLTSTRRRFC--QVVDPTVQGFCAGAILEQ-IPCAPGSC 1199
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 36.7 bits (81), Expect = 0.041
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 404 WGPW-GPCSVTSGAAR--ASRQRDY--VWPARAHAEACR--VQLTDYKHCHGPRMHCRAV 456
W PW G C V R A R RD V P + C L D ++C G R+
Sbjct: 208 WSPWIGTCHVDCPLLRQHAHRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSC 267
Query: 457 SEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAP 496
P + G S WS+WS C R RTR P
Sbjct: 268 KV----PCKLDG--GWSSWSDWSACSSSCHRYRTRACTVP 301
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 36.7 bits (81), Expect = 0.041
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 404 WGPW-GPCSVTSGAAR--ASRQRDY--VWPARAHAEACR--VQLTDYKHCHGPRMHCRAV 456
W PW G C V R A R RD V P + C L D ++C G R+
Sbjct: 236 WSPWIGTCHVDCPLLRQHAHRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSC 295
Query: 457 SEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAP 496
P + G S WS+WS C R RTR P
Sbjct: 296 KV----PCKLDG--GWSSWSDWSACSSSCHRYRTRACTVP 329
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 36.7 bits (81), Expect = 0.041
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 404 WGPW-GPCSVTSGAAR--ASRQRDY--VWPARAHAEACR--VQLTDYKHCHGPRMHCRAV 456
W PW G C V R A R RD V P + C L D ++C G R+
Sbjct: 208 WSPWIGTCHVDCPLLRQHAHRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSC 267
Query: 457 SEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAP 496
P + G S WS+WS C R RTR P
Sbjct: 268 KV----PCKLDG--GWSSWSDWSACSSSCHRYRTRACTVP 301
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 36.7 bits (81), Expect = 0.041
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 404 WGPW-GPCSVTSGAAR--ASRQRDY--VWPARAHAEACR--VQLTDYKHCHGPRMHCRAV 456
W PW G C V R A R RD V P + C L D ++C G R+
Sbjct: 208 WSPWIGTCHVDCPLLRQHAHRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSC 267
Query: 457 SEYEPDPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLAP 496
P + G S WS+WS C R RTR P
Sbjct: 268 KV----PCKLDG--GWSSWSDWSACSSSCHRYRTRACTVP 301
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 35.5 bits (78), Expect = 0.096
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Query: 467 SGPCAM-SPWSEWSPCDGCG 485
+GPC + + W+EWSPC GCG
Sbjct: 695 AGPCCVWNRWTEWSPCIGCG 714
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 470 CAMSPWSEWSPCD-GCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPCE 524
C + WS+WS C CG R R P +C G A + PC PC+
Sbjct: 1079 CDWTRWSQWSVCTASCGEGRRMRRRRCPCGESKCGAGVDA-----DSEPCVSPPCQ 1129
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 438 VQLTDYKHCHGPRMHCRAVSEYEP--DPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLA 495
+Q T HC G R E DP G C S W EW C C R
Sbjct: 784 IQATPKCHCPGDTFQTRPCLEQNACQDPV---GKCEWSEWGEWCGCMRCRPGKEVRRRFC 840
Query: 496 PRA 498
R+
Sbjct: 841 DRS 843
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 334 PAAPVRALRTDWPRDVRSPFFSTTGEMRPFARVRLTRLRLYEKSCDVTEPGTDQNVQEGV 393
P+ V A + P S + S TG + R R+ + P T++ +
Sbjct: 384 PSVEVEACKALLPCPTWSSWMSWTGCGNSCGKSIERRSRICQNGLLCPGPATEERTCDKR 443
Query: 394 GAGAWCATHGWGPWGPCSVTSGAARASRQRDYV 426
W WG W CS GA R R+ +
Sbjct: 444 PCPHWS---NWGQWEKCSKECGAGHTYRNRECI 473
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 35.5 bits (78), Expect = 0.096
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Query: 467 SGPCAM-SPWSEWSPCDGCG 485
+GPC + + W+EWSPC GCG
Sbjct: 695 AGPCCVWNRWTEWSPCIGCG 714
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 470 CAMSPWSEWSPCD-GCGVRARTRHYLAPRAYKRCHIGFRARTILSQAMPCAEGPCE 524
C + WS+WS C CG R R P +C G A + PC PC+
Sbjct: 1052 CDWTRWSQWSVCTASCGEGRRMRRRRCPCGESKCGAGVDA-----DSEPCVSPPCQ 1102
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 438 VQLTDYKHCHGPRMHCRAVSEYEP--DPAESSGPCAMSPWSEWSPCDGCGVRARTRHYLA 495
+Q T HC G R E DP G C S W EW C C R
Sbjct: 784 IQATPKCHCPGDTFQTRPCLEQNACQDPV---GKCEWSEWGEWCGCMRCRPGKEVRRRFC 840
Query: 496 PRA 498
R+
Sbjct: 841 DRS 843
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 334 PAAPVRALRTDWPRDVRSPFFSTTGEMRPFARVRLTRLRLYEKSCDVTEPGTDQNVQEGV 393
P+ V A + P S + S TG + R R+ + P T++ +
Sbjct: 384 PSVEVEACKALLPCPTWSSWMSWTGCGNSCGKSIERRSRICQNGLLCPGPATEERTCDKR 443
Query: 394 GAGAWCATHGWGPWGPCSVTSGAARASRQRDYV 426
W WG W CS GA R R+ +
Sbjct: 444 PCPHWS---NWGQWEKCSKECGAGHTYRNRECI 473
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 441 TDYKHCHGPRMHCRAVSEYEPDPAESSGP--CAMSPWSEWSPCDGCGVRARTR 491
T Y P H R+ EY P + C S WSEWS C R R R
Sbjct: 919 TSYNSNRRPS-HSRSQDEYVPIDSVIGRVQVCHWSKWSEWSRCHDNSTRERKR 970
>AL032623-5|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3 protein.
Length = 1816
Score = 33.1 bits (72), Expect = 0.51
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 448 GPRMHCRAVSEYEPDPAESSGPCAMSPWSEWSPC---DGCGVRARTRHYLAPRAYKRCHI 504
G R + + + E + ES PCA++ + SPC GCG T Y CH+
Sbjct: 304 GNRNNFQTLEECQAQCPESPNPCAVTGGATLSPCAPGQGCG----TGSY--------CHV 351
Query: 505 GFRARTILSQAMPCAEGPCEQ 525
G + +T + P A C+Q
Sbjct: 352 GAQTQTTVCCPKPAAVDRCQQ 372
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 32.3 bits (70), Expect = 0.89
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 461 PDPAESSGP--CAMSPWSEWS----PCDGCGVRARTR 491
P P + P + S W EWS PC GCG + R R
Sbjct: 486 PTPTTTVAPDTASWSAWGEWSACSQPCGGCGTKTRVR 522
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 32.3 bits (70), Expect = 0.89
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 461 PDPAESSGP--CAMSPWSEWS----PCDGCGVRARTR 491
P P + P + S W EWS PC GCG + R R
Sbjct: 566 PTPTTTVAPDTASWSAWGEWSACSQPCGGCGTKTRVR 602
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 32.3 bits (70), Expect = 0.89
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 461 PDPAESSGP--CAMSPWSEWS----PCDGCGVRARTR 491
P P + P + S W EWS PC GCG + R R
Sbjct: 486 PTPTTTVAPDTASWSAWGEWSACSQPCGGCGTKTRVR 522
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 463 PAESSGPCAMSPWSEWSPCD----GCGVRARTR 491
P P + W EWS C GCG+R+R R
Sbjct: 501 PITVDAPNVWADWGEWSMCSRTCGGCGIRSRVR 533
>U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical
protein F09F9.4 protein.
Length = 654
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 396 GAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHC 446
G W A W W CS T G+ R R R P ++ C L + + C
Sbjct: 317 GGWSA---WSEWSACSETCGSGRQRRVRFCNEPVPKRSKYCDGPLIETQEC 364
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 395 AGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPA--RAHAEACRVQLTDYKHCHG 448
AG W + W PW CS T GA SR R P E Q+ + + C G
Sbjct: 490 AGNW---NSWSPWTACSATCGAC-GSRMRTRTCPPGNACSGEPVETQICNTQACTG 541
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 473 SPWSEWSPCDGCGVRARTRHYL 494
SPWSEW+ C CG ++R R L
Sbjct: 707 SPWSEWTKCQ-CGKQSRKRKCL 727
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 393 VGAGAWCATHGWGPWGPCSVTSGAARASRQRDYVWPARAHAEACRVQLTDYKHC 446
V A +W A W PW C+ T G SRQ ++ E+ R ++ K C
Sbjct: 21 VDALSWAA---WSPWSSCTKTCGGG-VSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 457 SEYEPDPAESSGPCAMSPWSEW-----SPCDGCGVRARTR 491
S PD S C WSEW C GCG R R R
Sbjct: 616 STQAPDIINSVLECGCGAWSEWQGECSQQCGGCGHRLRKR 655
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/49 (26%), Positives = 18/49 (36%)
Query: 368 LTRLRLYEKSCDVTEPGTDQNVQEGVGAGAWCATHGWGPWGPCSVTSGA 416
+TR R+ C + + A C W W CSVT G+
Sbjct: 109 MTRSRVCNNGCSTCQCVGAAAESQACNAQPCCTWTAWSSWSACSVTCGS 157
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.132 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,060,878
Number of Sequences: 27539
Number of extensions: 598061
Number of successful extensions: 1345
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1217
Number of HSP's gapped (non-prelim): 112
length of query: 541
length of database: 12,573,161
effective HSP length: 85
effective length of query: 456
effective length of database: 10,232,346
effective search space: 4665949776
effective search space used: 4665949776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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