GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001244-TA|BGIBMGA001244-PA|IPR008376|Synembryn
         (493 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   4.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   6.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   8.5  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 9/76 (11%)

Query: 3   GLMRTRGNLLACLCFMLRDQDDIENVLCERW--VITLIDKSG----LLEPMESAEKDPTL 56
           G+ RTR  L+  L   + D+D++   L E+    ITL+        LL P+ES     T+
Sbjct: 45  GVERTRSELIPFLTETIYDEDEVLLALAEQLGSFITLVGGPEYAYCLLPPLESL---ATV 101

Query: 57  LVVPCKEVAIEAMKCL 72
                ++ A+E+++ +
Sbjct: 102 EETVVRDKAVESLRAV 117


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 159 DEASVSANSEDAPKYYFTDEDRVIVCELSKALFNL--IILPNEDTPTTEK 206
           +E S S  S  +P+   +  DR   CE+    F    ++  +E T T EK
Sbjct: 112 EEDSPSPTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHERTHTGEK 161


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)

Query: 264 PDHIYEGRDMTSLVILLQFLKHQLTASDERQNLYEKLSPILTVLN 308
           PD    G      V+    LK     SD+   L EK    LT+LN
Sbjct: 58  PDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFLKEKAVDFLTILN 102


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 123 TALIENIRLKFRHEDGAMHMINYLNEIYS 151
           TAL+  IR  FRH DG +  ++ L  + S
Sbjct: 190 TALVREIRNAFRH-DGLLLTMSVLPNVNS 217


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 275 SLVILLQFLKHQLTASDERQNLYEKLSPILTVLNKC 310
           SL+ +L F      +   R + Y+KLSP+  ++  C
Sbjct: 34  SLLWILLFTLGVTISGVYRTDFYKKLSPMRLIVQTC 69


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 95  LITRMKICKHIPYKKELMQYDMKL 118
           + T M  CK   +  +L+++D+KL
Sbjct: 737 ICTLMNRCKFSEFMTKLLEFDVKL 760


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,841
Number of Sequences: 317
Number of extensions: 4283
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 493
length of database: 114,650
effective HSP length: 59
effective length of query: 434
effective length of database: 95,947
effective search space: 41640998
effective search space used: 41640998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)