GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001244-TA|BGIBMGA001244-PA|IPR008376|Synembryn
         (493 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   4.6  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   6.1  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 120  FILTALIENIRLKFRHEDGAMHMINYLN 147
            ++LTAL+EN   K +H     + +NYL+
Sbjct: 988  YVLTALLENDIAKVKHAVVIQNGMNYLS 1015


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 215 VSVLGKIMTVQTSSKSNDLDLMNNIVNLL 243
           V +L  ++  +TS   ND D+  NI NL+
Sbjct: 395 VGLLCNVLLTKTSQFRNDEDIAENIQNLV 423


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.136    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,989
Number of Sequences: 2123
Number of extensions: 17216
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 2
length of query: 493
length of database: 516,269
effective HSP length: 67
effective length of query: 426
effective length of database: 374,028
effective search space: 159335928
effective search space used: 159335928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)