Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001243-TA|BGIBMGA001243-PA|IPR005326|Plectin/S10,
N-terminal
(176 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0) 183 6e-47
SB_50155| Best HMM Match : SPRY (HMM E-Value=7.7e-14) 31 0.40
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 30 0.92
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_37766| Best HMM Match : IncA (HMM E-Value=0.4) 29 1.6
SB_2524| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 28 3.7
SB_49188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 28 3.7
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_40181| Best HMM Match : Pox_A32 (HMM E-Value=0.0059) 28 4.9
SB_35742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 28 4.9
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_58477| Best HMM Match : Ion_trans (HMM E-Value=1.2e-25) 27 6.5
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_35969| Best HMM Match : B56 (HMM E-Value=3.1) 27 8.6
SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20) 27 8.6
SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8) 27 8.6
SB_33598| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_5591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0)
Length = 166
Score = 183 bits (446), Expect = 6e-47
Identities = 89/135 (65%), Positives = 105/135 (77%), Gaps = 5/135 (3%)
Query: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 60
ML+PK+NRV IYEYLFKEGV VAKKD+++PKHT++E +PNL VIKA+QSLKSRGYV+E+F
Sbjct: 1 MLIPKKNRVIIYEYLFKEGVCVAKKDFNSPKHTQIENVPNLHVIKALQSLKSRGYVEEKF 60
Query: 61 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSV-RTETVRRGPVGR--PDAPARSAE 117
W+H+YW LTNEGI YLR FLHLP EIVPATL+R V R ET R P G P P +
Sbjct: 61 CWKHYYWNLTNEGITYLRDFLHLPTEIVPATLRRQVTRAETARPRPKGMDGPRGPGEGGD 120
Query: 118 -DRSAYRRTPAAPGV 131
DR +YRR P PGV
Sbjct: 121 RDRESYRRGP-PPGV 134
>SB_50155| Best HMM Match : SPRY (HMM E-Value=7.7e-14)
Length = 453
Score = 31.5 bits (68), Expect = 0.40
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 99 ETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFVS 151
+TV PV D PAR +++S+ PAAPG AP+ ++ P + + S
Sbjct: 371 KTVGESPVPSHDLPARDQDNKSSDIH-PAAPGFAPNVEQDRYAPRAEPHRYTS 422
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 124 RTPAAPGVAPHDK-KADVGPGS 144
+TPA PG+AP D K VGPG+
Sbjct: 365 KTPALPGIAPSDALKGTVGPGN 386
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 3 MPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAW 62
+P N+VA+++ L ++ ++ +D+ + E K P++ + +Q L+ + +++Q
Sbjct: 2572 VPATNQVAMFQALQRQKMLEQTRDFF---NQEKGKPPSIGKQQPLQQLQEK-QLQDQLQM 2627
Query: 63 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAY 122
+H T + ++ + L + PA L + T+ ++ P+ P AP+ A ++
Sbjct: 2628 QHMQKQTTQQLMQGPMMHLAGKQQQPPAQLPQQQPTQVKKQQPL--PIAPSAGAHHQNKP 2685
Query: 123 RRTPA 127
R A
Sbjct: 2686 PRLQA 2690
>SB_37766| Best HMM Match : IncA (HMM E-Value=0.4)
Length = 585
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 127 AAPGVAPHDKKADVGP 142
A PG+APHDKK+ GP
Sbjct: 545 ARPGLAPHDKKSGKGP 560
>SB_2524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 16 FKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRH 64
+K +A+ D A HT ++ ++ + M++LK++ + K +F RH
Sbjct: 20 YKSSTPLARADMKAILHTYGAELSEERIKECMKALKTKKFSKLEFCLRH 68
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 89 PATLKRSVRTETVR--RGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 142
PAT+ + + R P GRP +P ++ E + + P AP + V P
Sbjct: 1951 PATMATKTKPGSARPTSPPKGRPSSPKKTGEKKKEAEKAPTQDPSAPPVSETAVSP 2006
>SB_49188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 23 AKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFY 66
+K D A H ++ ++ + M++LK++ ++K +F RHFY
Sbjct: 370 SKADMKAILHDYGAELSEERMKEYMKALKTKKFLKLEFCLRHFY 413
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 89 PATLKRSVRTETVR--RGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 142
PAT+ + + R P GRP +P ++ E + + P AP + V P
Sbjct: 809 PATMATKTKPGSARPTSPPKGRPSSPKKTGEKKKEAEKAPTQDPSAPPVSETAVSP 864
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 103 RGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 142
+GP+G P P + R P PG P K+ + GP
Sbjct: 199 QGPIGPPGRPGPKGPKDTCPRCPPGPPG--PKGKRGETGP 236
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 82 HLPPEIVPATLKRSVRTETVRRGPVGRPDAP----ARSAEDRSAYRRTPAAPG 130
HL P ++ + S+ RGP GRP P R + R P +PG
Sbjct: 110 HLSPAVIRLCMGGSLTCPPGPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPG 162
>SB_40181| Best HMM Match : Pox_A32 (HMM E-Value=0.0059)
Length = 280
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 24 KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFY 66
K D A H ++ ++ + M++LK++ + K +F WRH Y
Sbjct: 151 KADMKAILHDYDAELSEEKMKEYMKALKTKKFSKLEFCWRHPY 193
>SB_35742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1113
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 24 KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFY 66
K D A H ++ ++ + M++LK++ + K +F WRH Y
Sbjct: 546 KADMKAILHDYDAELSEEKMKEYMKALKTKKFSKLEFCWRHPY 588
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 103 RGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 142
+GP+G P P + R P PG P K+ + GP
Sbjct: 199 QGPIGPPGRPGPKGPKDTCPRCPPGPPG--PKGKRGETGP 236
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 9 VAIYEYLFKEGVMVAKKDYHAPKHTELEKIPN 40
+A +++L K + + APK +EK+PN
Sbjct: 1395 IADFDFLSKSAIQALRLPVPAPKVNNMEKVPN 1426
>SB_58477| Best HMM Match : Ion_trans (HMM E-Value=1.2e-25)
Length = 578
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 25 KDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLP 84
+DY A T I + ++ + + SRG+VK+ +A+ W + + +L +L L
Sbjct: 118 EDYDASGGTVY--ITAIYTLEMICKIISRGFVKDSYAYLRDTWNWLDSLVVFLS-YLSLA 174
Query: 85 PEIVPATLKRSVR 97
P+I + R++R
Sbjct: 175 PDIASLSGIRTLR 187
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 107 GRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGS 144
G P+ + S+E R RT AP P K PG+
Sbjct: 6325 GEPEGTSPSSESRIPVGRTTKAPTTKPASKTTTTRPGT 6362
>SB_35969| Best HMM Match : B56 (HMM E-Value=3.1)
Length = 174
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 111 APARSAEDRSAYRRTPAAPGVAPHDK-KADVGPGSADLE-------FVSPILLCRIIVDW 162
AP ++ +SA + P+ AP+DK KA P +AD FV + C +I D+
Sbjct: 35 APKKTPAKKSAKKPAPSVKKTAPNDKTKAGETPKAADCPAPEREALFVQKVQQCCVIFDF 94
>SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20)
Length = 1193
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 114 RSAEDRSAYRRTPAAPGVAPHD----KKADVGPGSADLEFVSPILLCRIIVDWIEKLQAP 169
R E AYR TP + PHD ++ VG DLE + +++ ++IE
Sbjct: 889 RKCEVCMAYRNTPGKEPLKPHDFVARPRSKVGADLCDLEGRTLLVISDYYSNYIEAAHPK 948
Query: 170 ETYSR 174
T S+
Sbjct: 949 FTKSK 953
>SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8)
Length = 212
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 16 FKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRH 64
+K +A+ D A HT ++ ++ + +++LK++ + K +F RH
Sbjct: 20 YKSSTPLARADMKAILHTYGAELSEERIKECIKALKTKKFSKLEFCLRH 68
>SB_33598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 83 LPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 142
+P P T+K + + GPV P+ P+ + P GV D +
Sbjct: 311 IPTPDNPLTIKGHLEPPRLYHGPVFPPEQPSLTV---------PVVSGVMDSDHRVSEAI 361
Query: 143 GSADLEFVSPILLCRIIVDWIEKLQAPETYSR 174
E++ LL RI+ + + L P T ++
Sbjct: 362 EDRAAEWIEQELLARIVSEMNKPLPDPTTVTK 393
>SB_5591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 23 AKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFY 66
+K D A H ++ ++I+ M++LKS+ + K +F RH Y
Sbjct: 686 SKADMKAILHDYGAELSEEKMIEYMKTLKSKKFSKLEFCLRHPY 729
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,189,276
Number of Sequences: 59808
Number of extensions: 246653
Number of successful extensions: 899
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 887
Number of HSP's gapped (non-prelim): 23
length of query: 176
length of database: 16,821,457
effective HSP length: 78
effective length of query: 98
effective length of database: 12,156,433
effective search space: 1191330434
effective search space used: 1191330434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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