Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001242-TA|BGIBMGA001242-PA|IPR002018|Carboxylesterase,
type B
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 42 2e-04
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 30 0.86
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 30 1.1
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 29 2.0
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 29 2.6
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 29 2.6
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 3.5
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 28 3.5
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 4.6
SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein 1|Schizosaccharom... 27 6.1
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 27 6.1
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 27 8.0
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 8.0
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 27 8.0
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 8.0
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 42.3 bits (95), Expect = 2e-04
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 16/179 (8%)
Query: 170 EGVYKFYSIPYAVPPIKEKRFTYAQPLNN---LSLCWNETYQCHVPGPLC---VQFLENG 223
E ++F I YA PP+ + R+ L + S +N+ ++ P P + N
Sbjct: 16 EKCHRFTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQ-FKTICPQPFYNNRKNQVRNP 74
Query: 224 TITGEEDCLTLDIMTPHVRYDSP-LPVVVLIGANTLAGG----ISPAQPSALYA--RTEE 276
+EDCL L+I P + PV+ I L G P L A +
Sbjct: 75 DFKYDEDCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAK 134
Query: 277 VIFVRPNFRLGSFGFLSLNILSKSKYPHTSGNYALSDLLAALRWIHLNINHFGGDPEMV 335
I V P RL FGFL+ L + P +S N+ D L W + +I FGG+ E +
Sbjct: 135 FILVSPGHRLNLFGFLAGKELLEED-PKSS-NFGFWDQRLGLEWTYKHIESFGGNKENI 191
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 30.3 bits (65), Expect = 0.86
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 7 NKIEFEDEKTLDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDVTEQGRE 66
N+ F+ E + ++ AE++++ML+A ++AI+ R E E ++ E+ R+
Sbjct: 490 NEKRFDKEASGRINDLRAEQQQIMLEARQKAIE---RRRNEEEELARS------RERARK 540
Query: 67 VKPKYIPIGAIKMPGFFTKSSEKSKDPEDGKVATKLPLKE 106
K + I I + KM T ++E+S + E K + KE
Sbjct: 541 -KAEEIKISSSKMNSSPTITNERSSNVESSKKVEAIYTKE 579
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 5 EINKIEFEDEKTLDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDVTEQG 64
E N ++ E EK L ++ E +EK+ + A+KEA + AE+ P + V+
Sbjct: 8 EENDLDLE-EKRLQRQLNEIQEKKRLRSAQKEASSENAEVIQVPRSPPQQVRVLTVSSPS 66
Query: 65 REVKPKYIPIGAIK 78
+ PK + +G K
Sbjct: 67 KLKSPKRLILGIDK 80
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 1 MSTTEINKIEFEDEKTLDKKEIEAEEKEVMLKAEKEAID 39
+S + K+E E EK +KE EA E E K E ID
Sbjct: 32 LSKKALKKLEKEREKEQKRKEREAREAEEKKKREANEID 70
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 2 STTEINKI-EFEDEKTLDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDV 60
ST I K+ E E ++ DK+ ++ + + +++ E RAE E + LS
Sbjct: 6 STETIQKVLENEGDQQFDKEVVQNSDSNIETGQISDSLTKAVEERAETES--SSNLSNFT 63
Query: 61 TEQGREVKPKY 71
T + KP Y
Sbjct: 64 TSESESSKPAY 74
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 735
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 14 EKTLDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDVTEQGREVKPKYIP 73
EK ++E E EE ++A E +D FAEL P K+AL E++ + IP
Sbjct: 14 EKKRKEEEEEIEELNSQIEALSETVDHFAEL--PLTQPTKSALKNAHFITLTEIQKQCIP 71
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 28.3 bits (60), Expect = 3.5
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 10 EFEDEKTLDKKEIEAEE-KEVMLKAEKEAIDDF-AELRAEAEGPV-KAALSGDVTEQGRE 66
E + E + +++E E+EE EV ++E E+ + +E +E+E ++ SG + +
Sbjct: 82 ESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSFLKKP 141
Query: 67 VKPKYIPIGAIKMPGFFTKSSEKSKDPEDGKVATKLPLKERIRQ 110
K + P G + G +SSE+S D E+G+ K +R +
Sbjct: 142 EKEEAKPAGLKFLRG---ESSEESSDEEEGRRVVKSAKDKRYEE 182
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 432 SWLVLDGEMLRIHAYESCLDQKTAKQSGKVKVFKPMVFTTTLHSGHSVTLKNKHVKWTPE 491
+W L+GE L I Y S + + A Q V+KP++ T S + TL+ + +
Sbjct: 78 AWKQLEGETLEISRYHSQIIGQIASQ-----VYKPLIDYYT-SSPQTATLR-RLAERLST 130
Query: 492 IVEKIVNDSVIGEKNL 507
+ E++ + SV G K L
Sbjct: 131 VAEEMASSSVPGLKGL 146
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 427 DEIQRSWLVLDGEMLRIHAYESC-LDQKTAKQSGKVKVF 464
D I R W VLD E R A E+C D K + K VF
Sbjct: 259 DRILRIWAVLDSEHARSVASETCSSDPNNPKLNLKAPVF 297
>SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 12 EDEKTLDKKEIEAEEKEVMLKAEK 35
EDE +DKKE+E E+K + +K
Sbjct: 2 EDEMQIDKKEVEIEQKPPRFEIKK 25
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 6.1
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 368 PSVIFPGEVLEQSQKNNEQFRQMSKCNDADCLRRVSKEELLALTPDTWFGNNFETLPRTD 427
P+ I V+ Q QK+ R ND LRR+ ++A TPDT F + D
Sbjct: 459 PNHISKPSVVNQ-QKSRGGPRTAKLKND---LRRIQSSPIVAPTPDTSFREPLSEIGSND 514
Query: 428 EIQRSWLVLDGEM 440
SWLVL +
Sbjct: 515 ----SWLVLPNSL 523
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 196 LNNLSLCWNETYQCH--VPGPLCVQFLENGTITGEEDCLTLDIMT 238
LN+++ +E Y H V P V L GT+T E CLT + +T
Sbjct: 207 LNSVTETLDEYYGNHSDVMHPKWVHSLFEGTLTSETKCLTCENIT 251
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 17 LDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDVTEQGREV 67
L+K +E ++KE++ KE E+ + E P+ + VT + E+
Sbjct: 2194 LEKYNLENQKKEILENESKEEETRQPEVNIQPEEPINTSDMEGVTTEANEI 2244
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 264 PAQPSALYARTEEVIFVRPNFRLGSFGFLSLN 295
P+ PS L T+ +FV+P+ L L +N
Sbjct: 699 PSPPSGLLGPTDTAVFVKPDLSLEKLPTLEIN 730
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 88 EKSKDPEDGKVATKLPLKERIRQKK 112
EK K E+ K+A ++P+K++I+ K
Sbjct: 197 EKQKSLEEQKIAPEIPVKQQIKNDK 221
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,950,164
Number of Sequences: 5004
Number of extensions: 127688
Number of successful extensions: 351
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 16
length of query: 643
length of database: 2,362,478
effective HSP length: 77
effective length of query: 566
effective length of database: 1,977,170
effective search space: 1119078220
effective search space used: 1119078220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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