Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001239-TA|BGIBMGA001239-PA|IPR008728|PAXNEB
(284 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83307-6|CAM13056.1| 424|Homo sapiens elongation protein 4 homo... 153 5e-37
AK000505-1|BAA91212.1| 424|Homo sapiens protein ( Homo sapiens ... 153 5e-37
Z83307-7|CAM13057.1| 531|Homo sapiens elongation protein 4 homo... 135 2e-31
Z83001-1|CAM28371.1| 531|Homo sapiens elongation protein 4 homo... 135 2e-31
BC012514-1|AAH12514.1| 535|Homo sapiens ELP4 protein protein. 135 2e-31
U38545-1|AAB49031.1| 1074|Homo sapiens phospholipase D1a protein. 31 3.5
BC068976-1|AAH68976.1| 1074|Homo sapiens phospholipase D1, phosp... 31 3.5
AB209907-1|BAD93144.1| 1059|Homo sapiens phospholipase D1 varian... 31 3.5
>Z83307-6|CAM13056.1| 424|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 424
Score = 153 bits (372), Expect = 5e-37
Identities = 98/252 (38%), Positives = 139/252 (55%), Gaps = 11/252 (4%)
Query: 17 DEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQ-YGTT 75
+ K P ++ KMKIAWRY+ L ++E S++ FGH +D S+ + + IE S +
Sbjct: 148 NHKTPESNI-KMKIAWRYQLLPKMEIGPVSSSRFGHYYDASKRMPQELIEASNWHGFFLP 206
Query: 76 TWQDSTLSWQT-TMRRGKLKSALFHKLLRNIYETVLRSSGT-----NMLRLAIHSLGSPI 129
STL + ++ G K F + + IYE S N+LR+ I +LGSP+
Sbjct: 207 EKISSTLKVEPCSLTPGYTKLLQFIQNI--IYEEGFDGSNPQKKQRNILRIGIQNLGSPL 264
Query: 130 WMAMDSDDTEFQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHN 189
W D E L F+Y LR L+R A IT+P+HL ++ I+ +V +
Sbjct: 265 W-GDDICCAENGGNSHSLTKFLYVLRGLLRTSLSACIITMPTHLIQNKAIIARVTTLSDV 323
Query: 190 AVRIESFAGSEKETNPVYKDYHGLFHITKLTALYTLVPFVPPSLDLAFKLKRKKFVIEKL 249
V +ESF GSE+ETNP+YKDYHGL HI ++ L L+ DLAFKLKRK F IE+L
Sbjct: 324 VVGLESFIGSERETNPLYKDYHGLIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIERL 383
Query: 250 HIPPELEETSER 261
H+PP+L +T R
Sbjct: 384 HLPPDLSDTVSR 395
>AK000505-1|BAA91212.1| 424|Homo sapiens protein ( Homo sapiens
cDNA FLJ20498 fis, clone KAT08960. ).
Length = 424
Score = 153 bits (372), Expect = 5e-37
Identities = 98/252 (38%), Positives = 139/252 (55%), Gaps = 11/252 (4%)
Query: 17 DEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQ-YGTT 75
+ K P ++ KMKIAWRY+ L ++E S++ FGH +D S+ + + IE S +
Sbjct: 148 NHKTPESNI-KMKIAWRYQLLPKMEIGPVSSSRFGHYYDASKRMPQELIEASNWHGFFLP 206
Query: 76 TWQDSTLSWQT-TMRRGKLKSALFHKLLRNIYETVLRSSGT-----NMLRLAIHSLGSPI 129
STL + ++ G K F + + IYE S N+LR+ I +LGSP+
Sbjct: 207 EKISSTLKVEPCSLTPGYTKLLQFIQNI--IYEEGFDGSNPQKKQRNILRIGIQNLGSPL 264
Query: 130 WMAMDSDDTEFQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHN 189
W D E L F+Y LR L+R A IT+P+HL ++ I+ +V +
Sbjct: 265 W-GDDICCAENGGNSHSLTKFLYVLRGLLRTSLSACIITMPTHLIQNKAIIARVTTLSDV 323
Query: 190 AVRIESFAGSEKETNPVYKDYHGLFHITKLTALYTLVPFVPPSLDLAFKLKRKKFVIEKL 249
V +ESF GSE+ETNP+YKDYHGL HI ++ L L+ DLAFKLKRK F IE+L
Sbjct: 324 VVGLESFIGSERETNPLYKDYHGLIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIERL 383
Query: 250 HIPPELEETSER 261
H+PP+L +T R
Sbjct: 384 HLPPDLSDTVSR 395
>Z83307-7|CAM13057.1| 531|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 531
Score = 135 bits (326), Expect = 2e-31
Identities = 91/238 (38%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 17 DEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQ-YGTT 75
+ K P ++ KMKIAWRY+ L ++E S++ FGH +D S+ + + IE S +
Sbjct: 148 NHKTPESNI-KMKIAWRYQLLPKMEIGPVSSSRFGHYYDASKRMPQELIEASNWHGFFLP 206
Query: 76 TWQDSTLSWQT-TMRRGKLKSALFHKLLRNIYETVLRSSGT-----NMLRLAIHSLGSPI 129
STL + ++ G K F + + IYE S N+LR+ I +LGSP+
Sbjct: 207 EKISSTLKVEPCSLTPGYTKLLQFIQNI--IYEEGFDGSNPQKKQRNILRIGIQNLGSPL 264
Query: 130 WMAMDSDDTEFQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHN 189
W D E L F+Y LR L+R A IT+P+HL ++ I+ +V +
Sbjct: 265 W-GDDICCAENGGNSHSLTKFLYVLRGLLRTSLSACIITMPTHLIQNKAIIARVTTLSDV 323
Query: 190 AVRIESFAGSEKETNPVYKDYHGLFHITKLTALYTLVPFVPPSLDLAFKLKRKKFVIE 247
V +ESF GSE+ETNP+YKDYHGL HI ++ L L+ DLAFKLKRK F IE
Sbjct: 324 VVGLESFIGSERETNPLYKDYHGLIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIE 381
>Z83001-1|CAM28371.1| 531|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 531
Score = 135 bits (326), Expect = 2e-31
Identities = 91/238 (38%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 17 DEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQ-YGTT 75
+ K P ++ KMKIAWRY+ L ++E S++ FGH +D S+ + + IE S +
Sbjct: 148 NHKTPESNI-KMKIAWRYQLLPKMEIGPVSSSRFGHYYDASKRMPQELIEASNWHGFFLP 206
Query: 76 TWQDSTLSWQT-TMRRGKLKSALFHKLLRNIYETVLRSSGT-----NMLRLAIHSLGSPI 129
STL + ++ G K F + + IYE S N+LR+ I +LGSP+
Sbjct: 207 EKISSTLKVEPCSLTPGYTKLLQFIQNI--IYEEGFDGSNPQKKQRNILRIGIQNLGSPL 264
Query: 130 WMAMDSDDTEFQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHN 189
W D E L F+Y LR L+R A IT+P+HL ++ I+ +V +
Sbjct: 265 W-GDDICCAENGGNSHSLTKFLYVLRGLLRTSLSACIITMPTHLIQNKAIIARVTTLSDV 323
Query: 190 AVRIESFAGSEKETNPVYKDYHGLFHITKLTALYTLVPFVPPSLDLAFKLKRKKFVIE 247
V +ESF GSE+ETNP+YKDYHGL HI ++ L L+ DLAFKLKRK F IE
Sbjct: 324 VVGLESFIGSERETNPLYKDYHGLIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIE 381
>BC012514-1|AAH12514.1| 535|Homo sapiens ELP4 protein protein.
Length = 535
Score = 135 bits (326), Expect = 2e-31
Identities = 91/238 (38%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 17 DEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQ-YGTT 75
+ K P ++ KMKIAWRY+ L ++E S++ FGH +D S+ + + IE S +
Sbjct: 148 NHKTPESNI-KMKIAWRYQLLPKMEIGPVSSSRFGHYYDASKRMPQELIEASNWHGFFLP 206
Query: 76 TWQDSTLSWQT-TMRRGKLKSALFHKLLRNIYETVLRSSGT-----NMLRLAIHSLGSPI 129
STL + ++ G K F + + IYE S N+LR+ I +LGSP+
Sbjct: 207 EKISSTLKVEPCSLTPGYTKLLQFIQNI--IYEEGFDGSNPQKKQRNILRIGIQNLGSPL 264
Query: 130 WMAMDSDDTEFQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHN 189
W D E L F+Y LR L+R A IT+P+HL ++ I+ +V +
Sbjct: 265 W-GDDICCAENGGNSHSLTKFLYVLRGLLRTSLSACIITMPTHLIQNKAIIARVTTLSDV 323
Query: 190 AVRIESFAGSEKETNPVYKDYHGLFHITKLTALYTLVPFVPPSLDLAFKLKRKKFVIE 247
V +ESF GSE+ETNP+YKDYHGL HI ++ L L+ DLAFKLKRK F IE
Sbjct: 324 VVGLESFIGSERETNPLYKDYHGLIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIE 381
>U38545-1|AAB49031.1| 1074|Homo sapiens phospholipase D1a protein.
Length = 1074
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 140 FQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGS 199
FQ + R+L+ + ++RI I + ++ E+P M + S+ N +R E F G
Sbjct: 123 FQEFHRELLKYKAFIRIPIPTRRHTFR---RQNVREEPREMPSLPRSSENMIREEQFLGR 179
Query: 200 EKETN---------PVYKDYHG---LFHITKLTALYTLVP 227
K+ P+Y++YH I++L+ ++ L P
Sbjct: 180 RKQLEDYLTKILKMPMYRNYHATTEFLDISQLSFIHDLGP 219
>BC068976-1|AAH68976.1| 1074|Homo sapiens phospholipase D1,
phosphatidylcholine-specific protein.
Length = 1074
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 140 FQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGS 199
FQ + R+L+ + ++RI I + ++ E+P M + S+ N +R E F G
Sbjct: 123 FQEFHRELLKYKAFIRIPIPTRRHTFR---RQNVREEPREMPSLPRSSENMIREEQFLGR 179
Query: 200 EKETN---------PVYKDYHG---LFHITKLTALYTLVP 227
K+ P+Y++YH I++L+ ++ L P
Sbjct: 180 RKQLEDYLTKILKMPMYRNYHATTEFLDISQLSFIHDLGP 219
>AB209907-1|BAD93144.1| 1059|Homo sapiens phospholipase D1 variant
protein.
Length = 1059
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 140 FQNYGRDLIMFMYYLRILIRDKNVAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGS 199
FQ + R+L+ + ++RI I + ++ E+P M + S+ N +R E F G
Sbjct: 146 FQEFHRELLKYKAFIRIPIPTRRHTFR---RQNVREEPREMPSLPRSSENMIREEQFLGR 202
Query: 200 EKETN---------PVYKDYHG---LFHITKLTALYTLVP 227
K+ P+Y++YH I++L+ ++ L P
Sbjct: 203 RKQLEDYLTKILKMPMYRNYHATTEFLDISQLSFIHDLGP 242
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,607,412
Number of Sequences: 224733
Number of extensions: 1732387
Number of successful extensions: 6798
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6783
Number of HSP's gapped (non-prelim): 8
length of query: 284
length of database: 73,234,838
effective HSP length: 89
effective length of query: 195
effective length of database: 53,233,601
effective search space: 10380552195
effective search space used: 10380552195
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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