Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001236-TA|BGIBMGA001236-PA|IPR005631|Protein of unknown
function DUF339
(114 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31477| Best HMM Match : TPR_div1 (HMM E-Value=3.5e-34) 133 3e-32
SB_29046| Best HMM Match : Alpha_kinase (HMM E-Value=8.4e-13) 29 0.69
SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33) 29 1.2
SB_15882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_8835| Best HMM Match : RVT_1 (HMM E-Value=1.2e-36) 28 1.6
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 28 2.1
SB_39545| Best HMM Match : TolA (HMM E-Value=0.12) 27 3.7
SB_53690| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_47788| Best HMM Match : Cir_Bir_Yir (HMM E-Value=8.6) 27 4.9
SB_42535| Best HMM Match : Bac_transf (HMM E-Value=2.7) 27 4.9
SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7) 27 4.9
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 26 6.4
SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34) 26 6.4
SB_17573| Best HMM Match : SspO (HMM E-Value=0.55) 26 6.4
SB_11323| Best HMM Match : SspO (HMM E-Value=0.85) 26 6.4
SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44) 26 6.4
SB_3445| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_43264| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_36224| Best HMM Match : ASC (HMM E-Value=1.9e-38) 26 6.4
SB_28723| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_23958| Best HMM Match : FG-GAP (HMM E-Value=0.055) 26 6.4
SB_618| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
>SB_31477| Best HMM Match : TPR_div1 (HMM E-Value=3.5e-34)
Length = 162
Score = 133 bits (322), Expect = 3e-32
Identities = 59/107 (55%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
Query: 8 IPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINS 67
IP Y V + + E ++ARL YQSRKRGMLEN LLLSTFA ++L+ F++ YD LIN
Sbjct: 46 IPNYKVREDETTEMKRARLLYQSRKRGMLENGLLLSTFADRHLDEFDDDLLQQYDYLINQ 105
Query: 68 PSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDK-IALRQPDL 113
P+NDWD++YWI E KPTP E+++ +M+++K AKNED+ + RQPDL
Sbjct: 106 PTNDWDLYYWITENKPTPDEYNSPVMDMIKDFAKNEDRDVRTRQPDL 152
>SB_29046| Best HMM Match : Alpha_kinase (HMM E-Value=8.4e-13)
Length = 1054
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 13 VEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMM 60
+ + +PL + A+ +Y+ + + D+L A+ Y+ FN+K M+
Sbjct: 900 INQDEPLARYVAKQYYEEQPIKQYQQDVLSQMTARSYVAQFNQKLFML 947
>SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33)
Length = 919
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 39 DLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKK 98
DL ++ ++ + G + D + S +N+ DI+ KE++N + LL +
Sbjct: 479 DLAITRMSESLVTGTPVVDHFLSDHAVESTANELDIYV---------KEYNNTLAKLLNR 529
Query: 99 HAKNEDK 105
HA N+ +
Sbjct: 530 HAPNKTR 536
>SB_15882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 12 DVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSND 71
D + Q+ LE +A + + + G+ LL++T + L + +Q + ++ SP
Sbjct: 720 DPDAQKFLETLRALVRF---RLGLPRPGLLVNTINYRRLKSIDLEQ--LKAEMLQSPLCT 774
Query: 72 WDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 111
D E KE++N + LL +HA N+ + + +P
Sbjct: 775 KDSPSTANELDIYVKEYNNTLAKLLNRHAPNKTRTRVTRP 814
>SB_8835| Best HMM Match : RVT_1 (HMM E-Value=1.2e-36)
Length = 979
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 12 DVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSND 71
D + Q+ LE +A + + + G+ LL++T + L + +Q + ++ SP
Sbjct: 321 DPDAQKFLETLRALVRF---RLGLPRPGLLVNTINYRRLKSIDLEQ--LKAEMLQSPLCT 375
Query: 72 WDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 111
D E KE++N + LL +HA N+ + + +P
Sbjct: 376 KDSPSTANELDIYVKEYNNTLAKLLNRHAPNKTRTRVTRP 415
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 ENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLL 96
E DL FAKK +N F + +++ D+L N V ++DN + LL
Sbjct: 401 ELDLCKPQFAKKVVN-FKKLRSVDIDQLSEDLLNSEHFQNQQVNINNLVIKYDNTLKALL 459
Query: 97 KKHAKNEDKIALRQP 111
KHA + K+ +P
Sbjct: 460 DKHAPLKAKLVTIRP 474
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 80 EKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 111
EK+P P + E+ LL++H ++++A +QP
Sbjct: 5863 EKEPIPDDDYEEVHRLLEEHKVFQEEMAKKQP 5894
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 54 NEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIA 107
+E + YDRL++ DW + KK T + F ++ L KH + K+A
Sbjct: 353 HEVYRVFYDRLVDDKDRDW---LHTLLKKVTKEHFKDDFDGLF-KHLSSSGKVA 402
>SB_39545| Best HMM Match : TolA (HMM E-Value=0.12)
Length = 1189
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 84 TPKEFDNEIMNLLKKHAKNEDKIALR 109
TP++ DN I+ K+H + ++K+AL+
Sbjct: 1159 TPEDMDNIILTGDKRHRETQEKMALK 1184
>SB_53690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 4.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 ENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLL 96
E DL FAKK +N F + +++ D+L N V ++DN + LL
Sbjct: 11 ELDLCKPQFAKKVVN-FRKLRSVDIDQLSEDLLNSELFQNQQVNINNLVIKYDNTLKALL 69
Query: 97 KKHAKNEDKIALRQP 111
KHA + K+ +P
Sbjct: 70 DKHAPLKAKLVTIRP 84
>SB_47788| Best HMM Match : Cir_Bir_Yir (HMM E-Value=8.6)
Length = 294
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/88 (14%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 9 PLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINS- 67
P D ++ + L+ ++ +L ++ + +++ + + + + N+ + ++S
Sbjct: 30 PWMDCDEIRELQAKRDKLMREAHTKNTVDSWVAFRSIRNRIKSVINKSKRAFITNALSSK 89
Query: 68 -PSNDWDIFYWIVEKKPTPKEFDNEIMN 94
P + W + + I+ P P + D + +N
Sbjct: 90 RPKDVWRVIHRILNPSPKPLQADPDKLN 117
>SB_42535| Best HMM Match : Bac_transf (HMM E-Value=2.7)
Length = 245
Score = 26.6 bits (56), Expect = 4.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 ENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLL 96
E DL FAKK +N F + +++ D+L N V ++DN + LL
Sbjct: 67 ELDLCKPQFAKKVVN-FRKLRSVDIDQLSEDLLNSELFQNQQVNINNLVIKYDNTLKALL 125
Query: 97 KKHAKNEDKIALRQP 111
KHA + K+ +P
Sbjct: 126 DKHAPLKAKLVTIRP 140
>SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7)
Length = 577
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 80 EKKPTPKEFDNEIMNLLKKHAKNEDKIALRQPDLH 114
EK + E D+ I NLL + A +D A+ QP+++
Sbjct: 393 EKIDSSMEGDSSIQNLLPEPADGDDLSAVPQPEVN 427
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 26.6 bits (56), Expect = 4.9
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 16 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLN-GFNEKQTMMYDRLI-NSPSNDWD 73
Q+PL+K LH R L + S K+Y E + ++L+ N P + W+
Sbjct: 211 QKPLDKMNEFLHSPQLVRNALRHGKAASDRTKRYYEIKAKEGMAAIIEQLVPNDPGSLWN 270
Query: 74 IFYWIVEKK-PTPKEFDNEIMNLLKKHAK 101
+EK+ P++ D L+ AK
Sbjct: 271 FVSPSMEKRYGNPRDTDTIDDTLMGNLAK 299
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 323 KEYNNTLAKLLNRHAPNKTRTRVTRP 348
>SB_18991| Best HMM Match : RVT_1 (HMM E-Value=2.8e-34)
Length = 899
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 49 KEYNNTLAKLLNRHAPNKTRTRVTRP 74
>SB_17573| Best HMM Match : SspO (HMM E-Value=0.55)
Length = 223
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 73 KEYNNTLAKLLNRHAPNKTRTRVTRP 98
>SB_11323| Best HMM Match : SspO (HMM E-Value=0.85)
Length = 436
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 292 KEYNNTLAKLLNRHAPNKTRTRVTRP 317
>SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44)
Length = 270
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 12 DVEKQQPLEKRKARLHYQSRKRGMLENDLLLS--TFAKKYLNGFNEKQTMM 60
D+E+Q+ L K + + R E D+ +S T A+K EK TMM
Sbjct: 71 DIERQRRLAKERLEARRRKRDEQQYEEDMAVSIVTMAEKQFAMIREK-TMM 120
>SB_3445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 138 KEYNNTLAKLLNRHAPNKTRTRVTRP 163
>SB_43264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 243 KEYNNTLAKLLNRHAPNKTRTRVTRP 268
>SB_36224| Best HMM Match : ASC (HMM E-Value=1.9e-38)
Length = 451
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 35 MLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDI 74
M++ +L A++YL+ ++K+ +D + S S D+DI
Sbjct: 102 MMQKSKILGKDAQRYLDLLDQKKEDQWDAISQSFSPDFDI 141
>SB_28723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 861
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 337 KEYNNTLAKLLNRHAPNKTRTRVTRP 362
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 12 DVEKQQPLEKRKARLHYQSRKRGMLENDLLLS--TFAKKYLNGFNEKQTMM 60
D+E+Q+ L K + + R E D+ +S T A+K EK TMM
Sbjct: 2253 DIERQRRLAKERLEARRRKRDEQQYEEDMAVSIVTMAEKQFAMIREK-TMM 2302
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRL 64
E+QQ L K + Q + G + ND L T NG +++ DR+
Sbjct: 1835 ERQQQLLKERLEKLRQRKASGEVVNDDELETLEMIEANGIESVDSVVLDRI 1885
>SB_23958| Best HMM Match : FG-GAP (HMM E-Value=0.055)
Length = 683
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 34 GMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDI 74
G + D+ T K LN F +KQT D ++N ++ D+
Sbjct: 500 GRVRRDVDKETRKAKLLNAFTKKQTDKADDVVNDDDDNDDM 540
>SB_618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
KE++N + LL +HA N+ + + +P
Sbjct: 14 KEYNNTLAKLLNRHAPNKTRTRVTRP 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,159,637
Number of Sequences: 59808
Number of extensions: 165459
Number of successful extensions: 432
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 27
length of query: 114
length of database: 16,821,457
effective HSP length: 73
effective length of query: 41
effective length of database: 12,455,473
effective search space: 510674393
effective search space used: 510674393
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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