GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001236-TA|BGIBMGA001236-PA|IPR005631|Protein of unknown
function DUF339
         (114 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    28   0.072
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   2.0  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   2.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   2.0  

>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 0.072
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 31  RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSND 71
           ++  M+E ++L+    +KY  G+N  +      L+N P+ND
Sbjct: 471 KRLAMMEMEILVCRMVRKYDVGWNYGELKYRATLVNIPAND 511


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 2   DTTYMEIPLYD--VEKQQPLEKRKARLHYQSRKRGMLEND 39
           DT  +++P  +    KQQ  E+ + RL  QS++R  +E D
Sbjct: 96  DTVELDVPRAERATLKQQYEEQHRKRLEQQSKQRA-IEKD 134


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 2   DTTYMEIPLYD--VEKQQPLEKRKARLHYQSRKRGMLEND 39
           DT  +++P  +    KQQ  E+ + RL  QS++R  +E D
Sbjct: 96  DTVELDVPRAERATLKQQYEEQHRKRLEQQSKQRA-IEKD 134


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 45  FAKKYLNGFNEKQTMMYDRLINSPSNDWD 73
           FA  Y+N    +     +R    PS DWD
Sbjct: 877 FANDYINEVLHEDNEDEERQAAGPSEDWD 905


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,990
Number of Sequences: 2123
Number of extensions: 4965
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 114
length of database: 516,269
effective HSP length: 56
effective length of query: 58
effective length of database: 397,381
effective search space: 23048098
effective search space used: 23048098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)