GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001236-TA|BGIBMGA001236-PA|IPR005631|Protein of unknown
function DUF339
         (114 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022667-1|AAY55083.1|  163|Drosophila melanogaster IP07694p pro...   157   2e-39
AE013599-614|AAF59116.2|  163|Drosophila melanogaster CG14757-PA...   157   2e-39
AE013599-1095|AAF58794.2|  156|Drosophila melanogaster CG12895-P...   153   5e-38
AY071255-1|AAL48877.1|  156|Drosophila melanogaster RE29446p pro...   152   1e-37
AF145631-1|AAD38606.1|  326|Drosophila melanogaster BcDNA.GH0602...    28   2.5  
AE014297-4424|AAF56927.1|  326|Drosophila melanogaster CG7601-PA...    28   2.5  

>BT022667-1|AAY55083.1|  163|Drosophila melanogaster IP07694p
           protein.
          Length = 163

 Score =  157 bits (382), Expect = 2e-39
 Identities = 72/114 (63%), Positives = 86/114 (75%), Gaps = 1/114 (0%)

Query: 2   DTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMY 61
           D  Y+ +P Y V   +PLE RK RL YQSRKRGMLENDLLLSTFA K+L  F+ +QT  Y
Sbjct: 49  DPDYLPLPEYPVRPNEPLETRKQRLLYQSRKRGMLENDLLLSTFAAKHLQNFSAEQTAQY 108

Query: 62  DRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIA-LRQPDLH 114
           D+LIN  SNDWDI+YW  E KPTPKE+D EIM LLK+H KN +++  LRQPDL+
Sbjct: 109 DQLINGVSNDWDIYYWATEVKPTPKEYDTEIMGLLKEHVKNAERVTRLRQPDLN 162


>AE013599-614|AAF59116.2|  163|Drosophila melanogaster CG14757-PA
           protein.
          Length = 163

 Score =  157 bits (382), Expect = 2e-39
 Identities = 72/114 (63%), Positives = 86/114 (75%), Gaps = 1/114 (0%)

Query: 2   DTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMY 61
           D  Y+ +P Y V   +PLE RK RL YQSRKRGMLENDLLLSTFA K+L  F+ +QT  Y
Sbjct: 49  DPDYLPLPEYPVRPNEPLETRKQRLLYQSRKRGMLENDLLLSTFAAKHLQNFSAEQTAQY 108

Query: 62  DRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIA-LRQPDLH 114
           D+LIN  SNDWDI+YW  E KPTPKE+D EIM LLK+H KN +++  LRQPDL+
Sbjct: 109 DQLINGVSNDWDIYYWATEVKPTPKEYDTEIMGLLKEHVKNAERVTRLRQPDLN 162


>AE013599-1095|AAF58794.2|  156|Drosophila melanogaster CG12895-PA
           protein.
          Length = 156

 Score =  153 bits (371), Expect = 5e-38
 Identities = 70/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)

Query: 2   DTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMY 61
           D  ++ +P Y V   +PLE RK RL YQSRKRGMLENDLLLSTF  K+L  FN +QT  Y
Sbjct: 44  DPPHLPVPEYPVRPDEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNAEQTAEY 103

Query: 62  DRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKI-ALRQPDL 113
           D+LIN  SNDWDIFYW  + KPTP +FD EIM LLK+H KN +K+  +RQPDL
Sbjct: 104 DQLINGVSNDWDIFYWATDTKPTPPQFDTEIMRLLKEHVKNHEKVQRIRQPDL 156


>AY071255-1|AAL48877.1|  156|Drosophila melanogaster RE29446p
           protein.
          Length = 156

 Score =  152 bits (368), Expect = 1e-37
 Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)

Query: 2   DTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMY 61
           D  ++  P Y V   +PLE RK RL YQSRKRGMLENDLLLSTF  K+L  FN +QT  Y
Sbjct: 44  DPPHLPFPEYPVRPDEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNAEQTAEY 103

Query: 62  DRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKI-ALRQPDL 113
           D+LIN  SNDWDIFYW  + KPTP +FD EIM LLK+H KN +K+  +RQPDL
Sbjct: 104 DQLINGVSNDWDIFYWATDTKPTPPQFDTEIMRLLKEHVKNHEKVQRIRQPDL 156


>AF145631-1|AAD38606.1|  326|Drosophila melanogaster BcDNA.GH06026
          protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 67 SPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKK 98
          +PS+DW++ YW++     P      I+N+ ++
Sbjct: 10 APSSDWNVLYWVLGTVLMPVALPLAIINIWQR 41


>AE014297-4424|AAF56927.1|  326|Drosophila melanogaster CG7601-PA
          protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 67 SPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKK 98
          +PS+DW++ YW++     P      I+N+ ++
Sbjct: 10 APSSDWNVLYWVLGTVLMPVALPLAIINIWQR 41


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,304,295
Number of Sequences: 52641
Number of extensions: 257936
Number of successful extensions: 626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 6
length of query: 114
length of database: 24,830,863
effective HSP length: 75
effective length of query: 39
effective length of database: 20,882,788
effective search space: 814428732
effective search space used: 814428732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)