Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001236-TA|BGIBMGA001236-PA|IPR005631|Protein of unknown
function DUF339
(114 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-25|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 77 2e-15
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 1.4
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 1.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 1.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 1.4
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 28 1.4
AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical ... 28 1.4
AF067217-3|AAF99975.3| 479|Caenorhabditis elegans Hypothetical ... 27 2.4
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 27 3.2
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 27 3.2
U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical pr... 26 5.6
U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical pr... 26 5.6
U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical pr... 26 5.6
U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 25 9.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 25 9.8
AL132860-21|CAB60503.2| 263|Caenorhabditis elegans Hypothetical... 25 9.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 25 9.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 25 9.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 25 9.8
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 25 9.8
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 25 9.8
>AL117195-25|CAB55034.1| 119|Caenorhabditis elegans Hypothetical
protein Y57A10A.29 protein.
Length = 119
Score = 77.4 bits (182), Expect = 2e-15
Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 17 QPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 76
+ ++ ++ARL YQS+KRG+LEND+LL FA++ L +E + YD+LIN +WD+FY
Sbjct: 27 EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86
Query: 77 WIVEKKPTPKEFDN-EIMNLLKK 98
++ KK P++ ++ ++ +KK
Sbjct: 87 YLSNKKSPPEDVESCQVYQKVKK 109
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 16 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDW--- 72
Q E ++ HY+ R + ML++++ + L EK + L N+
Sbjct: 690 QSEQEMKQLEAHYE-RAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLH 748
Query: 73 DIFYWIVEKKPTPKEFDN 90
+IF W+ E+K T +E +N
Sbjct: 749 EIFNWVSEEKATREEMEN 766
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 31 RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 82
R+RG+ +DL F ++ + NEK ++YD+ S DWD + ++ K
Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQP 111
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 47 KKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPK--EFDNEIMNLLKKHAKNE 103
KK +N F +K T + + + +N WD F + KPTPK F +M+ K ++E
Sbjct: 262 KKVVNTFRQKPTPAPE-VTTTKANIWDKFTVGNKAKPTPKYIPFWQRLMSTTSKPIEDE 319
>AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical
protein Y73B3B.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 79 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 111
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMP 224
>AF067217-3|AAF99975.3| 479|Caenorhabditis elegans Hypothetical
protein F56A6.4 protein.
Length = 479
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 7 EIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN 66
+ PL +++ Q L + R ++R LE D S A++ +K+T +R I+
Sbjct: 124 KFPLKNLKLIQELRENAKRAREAEKERKTLEKDKKKSEMARRREEKEKDKETRKIEREIS 183
Query: 67 SPSN 70
+ +N
Sbjct: 184 AATN 187
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 27.1 bits (57), Expect = 3.2
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQT---MMYDRLINSPSN 70
E + LE ++RLH ++ ND+ + T K L+ NE+ T M Y ++ +
Sbjct: 146 ETETELESSRSRLHVLEKELSAKANDIFMVT---KDLHDKNEELTSFRMEYVTKLSEANR 202
Query: 71 DWDIFYWIVEK-KPTPKEFDNEIMNLLKKHAKNEDKIA-LRQPDLH 114
+ +EK K KE D + + L K+ ++ ++ +RQ H
Sbjct: 203 EKKALEEKLEKYKNDMKENDRKSLELNKEQVTTQNVLSEVRQLSAH 248
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 42 LSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKH 99
++ F KK +G KQ M RL+N P + + E + T F+N + +LK +
Sbjct: 175 ITQFLKK-ADGEKSKQIQMSQRLMNCPQFGQTMRLIVEESEHTRYTFENILWLILKSY 231
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 42 LSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKH 99
++ F KK +G KQ M RL+N P + + E + T F+N + +LK +
Sbjct: 175 ITQFLKK-ADGEKSKQIQMSQRLMNCPQFGQTMRLIVEESEHTRYTFENILWLILKSY 231
>U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical
protein ZK622.3c protein.
Length = 351
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 69 SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 105
SN+W +W+ EK P NE++ L+K +NE +
Sbjct: 110 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 150
>U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical
protein ZK622.3d protein.
Length = 460
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 69 SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 105
SN+W +W+ EK P NE++ L+K +NE +
Sbjct: 219 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 259
>U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical
protein ZK622.3b protein.
Length = 484
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 69 SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 105
SN+W +W+ EK P NE++ L+K +NE +
Sbjct: 243 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 283
>U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical
protein ZK622.3a protein.
Length = 475
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 69 SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 105
SN+W +W+ EK P NE++ L+K +NE +
Sbjct: 234 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 274
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 47 KKYLNGFNEKQTMMYDRLINSPSNDWDIFY----WIVEKKPTPKEFDNEIMNLLKKHAKN 102
KK N E D + N P+N +++ W E + KE D + LLK N
Sbjct: 280 KKEKNEHEEWYYGFIDAMKNDPANRAALYFLDKNWPEELEEREKERDRIRLTLLKSQRTN 339
Query: 103 EDKI 106
E+ +
Sbjct: 340 EEAV 343
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWD 73
EK+ E + A + + G+ D+ AKK + E D ++N +N
Sbjct: 384 EKEMRKEIQYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELAN--- 440
Query: 74 IFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQ 110
+ + +E+ ++ H + ++IA +Q
Sbjct: 441 VIRQCADTMARYPRLRDELERIVVSHMREREQIAKQQ 477
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWD 73
EK+ E + A + + G+ D+ AKK + E D ++N +N
Sbjct: 384 EKEMRKEIQYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELAN--- 440
Query: 74 IFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQ 110
+ + +E+ ++ H + ++IA +Q
Sbjct: 441 VIRQCADTMARYPRLRDELERIVVSHMREREQIAKQQ 477
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWD 73
EK+ E + A + + G+ D+ AKK + E D ++N +N
Sbjct: 384 EKEMRKEIQYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELAN--- 440
Query: 74 IFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQ 110
+ + +E+ ++ H + ++IA +Q
Sbjct: 441 VIRQCADTMARYPRLRDELERIVVSHMREREQIAKQQ 477
>AL132860-21|CAB60503.2| 263|Caenorhabditis elegans Hypothetical
protein Y56A3A.22 protein.
Length = 263
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 80 EKKPTPKEFDNEIMNLLKKHAKNEDKIA 107
EK+PTPK+ D++ + + E K+A
Sbjct: 36 EKEPTPKKPDDQKWKMFRMTMSEEQKLA 63
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQ 110
K F E+ +L KKH K D I +Q
Sbjct: 1141 KRFQKELDDLRKKHQKQRDSIQKQQ 1165
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 14 EKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWD 73
EK+ E + A + + G+ D+ AKK + E D ++N +N
Sbjct: 384 EKEMRKEIQYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELAN--- 440
Query: 74 IFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQ 110
+ + +E+ ++ H + ++IA +Q
Sbjct: 441 VIRQCADTMARYPRLRDELERIVVSHMREREQIAKQQ 477
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 86 KEFDNEIMNLLKKHAKNEDKIALRQ 110
K F E+ +L KKH K D I +Q
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQ 1166
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 27 HYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDR--LINSPSNDWDIFY 76
+Y S R EN+L L K+L N + ++ + L ++ N WD Y
Sbjct: 675 YYASLMRIFYENNLFLEIAVNKFLKSVNFQTSLSGNSSYLWDNDRNIWDTLY 726
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 27 HYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDR--LINSPSNDWDIFY 76
+Y S R EN+L L K+L N + ++ + L ++ N WD Y
Sbjct: 692 YYASLMRIFYENNLFLEIAVNKFLKSVNFQTSLSGNSSYLWDNDRNIWDTLY 743
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,286,376
Number of Sequences: 27539
Number of extensions: 143034
Number of successful extensions: 395
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 385
Number of HSP's gapped (non-prelim): 25
length of query: 114
length of database: 12,573,161
effective HSP length: 72
effective length of query: 42
effective length of database: 10,590,353
effective search space: 444794826
effective search space used: 444794826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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