GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001235-TA|BGIBMGA001235-PA|IPR001474|GTP cyclohydrolase
I
         (232 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 105 EDTDEMVVVKDIEMFSMC 122
           EDTD +VV+    +F +C
Sbjct: 308 EDTDTLVVIYTFNLFYLC 325


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 105 EDTDEMVVVKDIEMFSMC 122
           EDTD +VV+    +F +C
Sbjct: 264 EDTDTLVVIYTFNLFYLC 281


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 85  FFTKGYDQSLEEVLN 99
           FF +GY+ S +E+ N
Sbjct: 92  FFNQGYELSKQEIFN 106


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 101 AIFDEDTDEMVVVKDIEMF 119
           AIF+E+TD++V V   E +
Sbjct: 151 AIFNEETDKLVEVLKEECY 169


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 101 AIFDEDTDEMVVVKDIEMF 119
           AIF+E+TD++V V   E +
Sbjct: 151 AIFNEETDKLVEVLKEECY 169


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,119
Number of Sequences: 317
Number of extensions: 1898
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 232
length of database: 114,650
effective HSP length: 55
effective length of query: 177
effective length of database: 97,215
effective search space: 17207055
effective search space used: 17207055
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)