GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001235-TA|BGIBMGA001235-PA|IPR001474|GTP cyclohydrolase
I
         (232 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    32   0.017
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    27   0.62 
AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    26   1.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    25   1.4  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   7.7  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 31.9 bits (69), Expect = 0.017
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 57  RLLLTG-LGEDPERAGLLKTPERAAKAMLFFTKGYDQS 93
           +L  TG L  D E  G L   E AA+A +FFT GYD S
Sbjct: 275 KLKNTGRLEADGEEIGRLTFEEIAAQAFIFFTAGYDTS 312


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 57  RLLLTG-LGEDPERAGLLKTPERAAKAMLFFTKGYDQS 93
           RL  TG L    E  G L   E AA+A +FFT G++ S
Sbjct: 283 RLKNTGSLEGSHEIVGRLSGDEIAAQAFIFFTAGFETS 320


>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
          protein.
          Length = 107

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 11 RQQFFAKYTDFRQVGGHENCTFHHDL--ELDHRPPTREALLPDMANSYRLLLTGLGEDPE 68
          R    A+Y DFR++ G    T   DL  E+      R A   D  +   L + G  E   
Sbjct: 14 RDHGLARYNDFRELCGLGRATRWEDLYGEIPRATVDRLARWYDTVDDVELAVAGALESHR 73

Query: 69 RAGLLKTP 76
           AG    P
Sbjct: 74 EAGATVGP 81


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 50  PDMANSY-RLLLTGLGEDPERAGLLKTP--ERAAKAMLFFTKGYDQSLEEVLNNAIFD 104
           PD  N   +L   G  ED    GL K    E AA+A +FF  G++ S    L+ A+F+
Sbjct: 269 PDFLNLLIQLKNKGTVEDETTEGLQKLTLDEVAAQAFVFFFAGFETS-STTLSFALFE 325


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 48  LLPDMANSYRLLLTGLGEDPERAGLLKTPERAAKAMLFFTKGYDQS 93
           LL  + NS +L   G GE+    G L   E  A+A +FF  G++ S
Sbjct: 270 LLMQLKNSGQL--DGSGEE---VGKLSLNEIVAQAFVFFLGGFETS 310


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,883
Number of Sequences: 2123
Number of extensions: 9165
Number of successful extensions: 58
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 5
length of query: 232
length of database: 516,269
effective HSP length: 62
effective length of query: 170
effective length of database: 384,643
effective search space: 65389310
effective search space used: 65389310
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)