Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001234-TA|BGIBMGA001234-PA|undefined
(246 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 34 0.10
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 33 0.18
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 33 0.18
At1g23540.1 68414.m02960 protein kinase family protein contains ... 32 0.31
At3g25680.1 68416.m03196 expressed protein 32 0.41
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.55
At1g30470.1 68414.m03724 SIT4 phosphatase-associated family prot... 31 0.55
At5g04420.1 68418.m00435 kelch repeat-containing protein low sim... 31 0.95
At2g26460.1 68415.m03175 RED family protein similar to Red prote... 31 0.95
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 30 1.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 1.3
At1g24310.1 68414.m03067 expressed protein 30 1.3
At4g39840.1 68417.m05645 expressed protein 30 1.7
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 30 1.7
At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 30 1.7
At2g18470.1 68415.m02151 protein kinase family protein contains ... 30 1.7
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 2.2
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 29 2.9
At1g21700.1 68414.m02717 SWIRM domain-containing protein / DNA-b... 29 2.9
At5g65660.1 68418.m08259 hydroxyproline-rich glycoprotein family... 29 3.8
At2g25970.1 68415.m03117 KH domain-containing protein 29 3.8
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 3.8
At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit (... 28 6.7
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 28 6.7
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 6.7
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 8.9
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 27 8.9
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 27 8.9
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 33.9 bits (74), Expect = 0.10
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 92 ATAPDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQ 151
A AP P + P S +H+ P + S P PA P+P+ Q
Sbjct: 250 AHAPSHSPAHAPSHSPAHSPSHSPATPKSP----SPSSSPAQSPATPSPMTP-------Q 298
Query: 152 SSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTSSA 201
S + + P+ +QS PSD + A + D T +P +P T+SA
Sbjct: 299 SPSPVSSPSPDQSAAPSDQSTPLAPSPSETTPTADNITAPAP-SPRTNSA 347
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 33.1 bits (72), Expect = 0.18
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 129 SRPFIKPAWPNPLQELRESDNR-QSSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDE 187
++P KPA P +E ESD +S + SE D + + +D + + S DE
Sbjct: 53 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDS-EDE 111
Query: 188 DTVESPWTPN-TSSAXXXXXXXXTDLMSRSREPSAEPGRAHPQIT 231
+ E+P P + T + + +P+A P + PQ T
Sbjct: 112 EEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPA-STPQKT 155
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 33.1 bits (72), Expect = 0.18
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 129 SRPFIKPAWPNPLQELRESDNR-QSSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDE 187
++P KPA P +E ESD +S + SE D + + +D + + S DE
Sbjct: 136 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDS-EDE 194
Query: 188 DTVESPWTPN-TSSAXXXXXXXXTDLMSRSREPSAEPGRAHPQIT 231
+ E+P P + T + + +P+A P + PQ T
Sbjct: 195 EEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPA-STPQKT 238
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Query: 94 APDFPPPYNPGTDDPGSGT---HAAYPPLTSVGH----DEELSRPFIKPAWPNPLQELRE 146
+P PP P P T ++A PP+ S D + P +P+ P P +L
Sbjct: 7 SPSSSPPAPPADTAPPPETPSENSALPPVDSSPPSPPADSSSTPPLSEPSTPPPDSQLPP 66
Query: 147 SDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTSS 200
+ +PP S PP D+ + ED+ P PN S+
Sbjct: 67 LPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESN 120
>At3g25680.1 68416.m03196 expressed protein
Length = 558
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 128 LSRPFIKPAWPNPLQ----ELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRI 182
+SR + ++ N LQ EL ++DN +S T+FN +++ PS+ N+E D D +
Sbjct: 107 ISRKGFRFSFSNLLQYQNVELDQNDNEESETLFN----DENNSPSEANSESVDYVSDNV 161
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 31.5 bits (68), Expect = 0.55
Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 7/128 (5%)
Query: 98 PPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFN 157
PP +P P H+ PP P P P+P+ + V++
Sbjct: 577 PPVASPPPPSPPPPVHSPPPPPVF-----SPPPPVFSPPPPSPVYSPPPPSHSPPPPVYS 631
Query: 158 PPAYEQSEPPSDTNNE--QADKEPDRISLHDEDTVESPWTPNTSSAXXXXXXXXTDLMSR 215
PP S PP+ N+ P + +T + P + S +
Sbjct: 632 PPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQ 691
Query: 216 SREPSAEP 223
S PS+EP
Sbjct: 692 SSTPSSEP 699
>At1g30470.1 68414.m03724 SIT4 phosphatase-associated family protein
contains similarity to copper chaperone homolog CCH
GB:AAF15286 GI:6525011 from [Glycine max]; contains Pfam
profile PF04499: SIT4 phosphatase-associated protein
Length = 811
Score = 31.5 bits (68), Expect = 0.55
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 104 GTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYEQ 163
G D + T A+ PP+ D P P+ P P + + R++S PP+
Sbjct: 624 GEADEFNATAASSPPVDMETEDSTSKHPSENPSEPEPEKSPAWVEWRETSESTAPPSSNP 683
Query: 164 SEPPSDTNNE-QADKE--PDRISLHDEDTVESPWTPNTSSAXXXXXXXXTDLMSRSREPS 220
E +N + Q +KE D ++ V++P P + + S + S
Sbjct: 684 EETTILSNGDVQIEKEDNDDDDDTDNKSAVKTPGVPGDETTEKLPDESGVEPTENSPKAS 743
Query: 221 A-EPGRAHPQ 229
EP + P+
Sbjct: 744 GIEPTESSPK 753
>At5g04420.1 68418.m00435 kelch repeat-containing protein low
similarity to rngB protein, Dictyostelium discoideum,
PIR:S68824; contains Pfam profile PF01344: Kelch motif
Length = 514
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 67 HRDMFKVLASARTSASVRSQCYRVNATAPDFPPPYNPGTDDPGS 110
H +FK A+A +ASV + + D+PPP NP + G+
Sbjct: 348 HPKIFKSPAAAAAAASVTAAYAIAKSDKSDYPPPANPTLNGNGN 391
>At2g26460.1 68415.m03175 RED family protein similar to Red protein
(RER protein) (Swiss-Prot:Q9Z1M8) [Mus musculus]
Length = 585
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 141 LQELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQ---ADKEPD 180
LQ+LRESD R+ F +Y + P N + +D+EPD
Sbjct: 441 LQQLRESDAREKDPTFVSESYSECYPGYQEYNHEIVGSDEEPD 483
>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to vegetative cell wall
protein gp1 [Chlamydomonas reinhardtii]
gi|12018147|gb|AAG45420
Length = 175
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/97 (23%), Positives = 35/97 (36%)
Query: 103 PGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYE 162
P D S A PP H+ P + P P E S + +S +PP
Sbjct: 29 PSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSVSPPLPN 88
Query: 163 QSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTS 199
S+ PS + + E ++ D +E P+ S
Sbjct: 89 DSQSPSSSASPSPSPEASDVNHSDITGIEGEKLPSGS 125
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 95 PDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSST 154
P F PP P T P + + A P S E+S P P P+ SD+ S
Sbjct: 814 PVFSPPPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPT-PDSEDIEAPSDSNHSPV 872
Query: 155 VFNPPA-YEQSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTS 199
+ PA SEP + ++ E + + SP + N S
Sbjct: 873 FKSSPAPSPDSEPEVEAPVPSSEPEVEAPKQSEATPSSSPPSSNPS 918
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.3 bits (65), Expect = 1.3
Identities = 30/106 (28%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 98 PPP--YNPGTDDPGSGTHAAYPPLT-SVGHDEELSRPFIKPAWPNPLQELRESDN-RQSS 153
PPP Y+P T P YPP+T S P + P P+ L + + S
Sbjct: 663 PPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPS 722
Query: 154 TVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTS 199
V+ PP + PPS + P S E P +PN S
Sbjct: 723 PVYYPPVAKSPPPPSPVYYPPVTQSPPPPSTPVE--YHPPASPNQS 766
>At1g24310.1 68414.m03067 expressed protein
Length = 377
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 76 SARTSASVRSQCYRVNATAPDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKP 135
S+ + S + + P F P NP G G+ P +S ++ + +
Sbjct: 15 SSTPAFGTSSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFSSQQPQQQQQQQ--QQ 72
Query: 136 AWPNPLQELRESDNRQSSTVFNPPAYEQSEPP---SDTNNEQADKEPDRISLHDED 188
P+ L + + S N + FN A +Q + P + + A P SL D D
Sbjct: 73 QQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAPIPYSLADRD 128
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 143 ELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDEDTVESPW 194
+L +S + ++ T PP+ + S PPS+ ++ + K P S E ++ W
Sbjct: 162 DLSKSSSSKNKTTIKPPSSKLSSPPSEKKSQPSSK-PVTKSKQSEKEIKPFW 212
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 95 PDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESD 148
PD P P +PG S T PL S G D L P P P+P L E +
Sbjct: 242 PDSPLP-SPGPPPSPSPTPGPDSPLPSPGPDSPLPSPGPDPPLPSPGPHLYEKN 294
>At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 646
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 126 EELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQ 174
+ + RP +K WP P Q +D R T P+ S P S + + Q
Sbjct: 330 QPMKRPELKLDWPKPQQSAALADKRWPPTTGQVPSASYSLPSSPSPSPQ 378
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 102 NPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAY 161
+P + P + T + PP + + S P P P P Q S ST +PPA
Sbjct: 4 SPESAPPTNSTSSPSPPSNT--NSTTSSPPAPSPPSPTPPQGDSSSSPPPDST--SPPAP 59
Query: 162 EQSEPPSDTNN 172
+ PP+ +NN
Sbjct: 60 QAPNPPNSSNN 70
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 88 YRVNATAPDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRES 147
+R+N +P P PY + P H + PP T H +I P P P + S
Sbjct: 695 HRLNLASPPPPAPYYYSSPQPPPPPHYSLPPPTPTYH-------YISP--PPPPTPI-HS 744
Query: 148 DNRQSSTVFNPPAYEQSEPPSDT 170
QS +PP E S PP T
Sbjct: 745 PPPQS----HPPCIEYSPPPPPT 763
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 98 PPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFN 157
PPP P + T + PP++ D++ P PL + S+N QS +
Sbjct: 227 PPPL-PSKSIDENETRSQSPPISPPKSDKQARSQTHSSPSPPPLLSPKASENHQSKSPMP 285
Query: 158 PPA 160
PP+
Sbjct: 286 PPS 288
>At1g21700.1 68414.m02717 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domain PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 807
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 104 GTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQEL 144
G D G+ ++ P + G D E+ PF+K PNP+ L
Sbjct: 468 GYDHKGTDSNGDLPGYSEQGSDTEIKLPFVKS--PNPVMAL 506
>At5g65660.1 68418.m08259 hydroxyproline-rich glycoprotein family
protein
Length = 136
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 66 RHRDMFKVLASARTSASVRSQCYRVNATAPDFPPPYN 102
+HR + + LA+ R SA + S Y+ P+ P N
Sbjct: 47 KHRSLRRSLANGRPSADIESNPYKPKPPFPEMKKPQN 83
>At2g25970.1 68415.m03117 KH domain-containing protein
Length = 632
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 99 PPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNP 158
P PG G + +YP TS G+ ++ S P P+ + E +QS P
Sbjct: 348 PGAYPGPPQYGQSPYGSYPQQTSAGYYDQSSVP---PSQQSAQGEYDYYGQQQSQ---QP 401
Query: 159 PAYEQSEPPSDT 170
+ S PP+DT
Sbjct: 402 SSGGSSAPPTDT 413
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 91 NATAPDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNR 150
N A PPP P + P + PP S+ + P P P+P L
Sbjct: 55 NTPAQSSPPPETPLSSPPPEPS----PPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPP 110
Query: 151 QSSTVFNPPAYEQSEPPSDT 170
++ V +PP PP T
Sbjct: 111 PANPVSSPPPESSPPPPPPT 130
>At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit
(IRX1) nearly identical to gi:12836997
Length = 985
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 100 PYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPP 159
P SG HA + S D EL+ + P W N ++ ++ +++S P
Sbjct: 78 PTQTNNTSQDSGIHARHISTVST-IDSELNDEYGNPIWKNRVESWKDKKDKKSKKKKKDP 136
Query: 160 ---AYEQSEPPSDTNNEQADKEPD 180
EQ E T D P+
Sbjct: 137 KATKAEQHEAQIPTQQHMEDTPPN 160
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 69 DMFKVLASARTSASVR-SQCYRVNATAPDFPPPYNPGTDDPGSG 111
++F + S + + + +Q Y +N +AP PPP PG G G
Sbjct: 4 NLFTTMRSLKLAEGCKGTQVYALNPSAPTPPPP--PGNSSTGGG 45
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/106 (27%), Positives = 37/106 (34%), Gaps = 17/106 (16%)
Query: 91 NATAPDFPPPYNPGT-DDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWP----------- 138
N T P PP P + P S PP ++ D + PF KP P
Sbjct: 75 NTTPPPTPPSSPPPSITPPPSPPQPQPPPQSTPTGDSPVVIPFPKPQLPPPSLFPPPSLV 134
Query: 139 NPLQELRESDNRQSSTVFNP-----PAYEQSEPPSDTNNEQADKEP 179
N L + R +DN + NP P PPS N+ P
Sbjct: 135 NQLPDPRPNDNNILEPINNPISLPSPPSTPFSPPSQENSGSQGSPP 180
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 98 PPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNR---QSST 154
PPP P P T + PP T V + P I+P P P E S+
Sbjct: 582 PPPIYPYLSPPPPPTPVSSPPPTPV-YSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSS 640
Query: 155 VFNPPAYEQSEPP 167
PP Y S PP
Sbjct: 641 PPPPPVYYSSPPP 653
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 139 NPLQELRESDNRQSSTVFNPPAYEQSEPPSDTNN----EQADKEPDRISLHDEDTVESP 193
NP +++ R +TVF P Y +S S+ N +++D E D+D VE P
Sbjct: 483 NPSLLVKKDRGRPGATVFIPKHYGESNVFSNVPNVELLQESDNESGSDGDQDDDGVELP 541
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.5 bits (58), Expect = 8.9
Identities = 33/139 (23%), Positives = 46/139 (33%), Gaps = 5/139 (3%)
Query: 95 PDFPPPYNPGTDDPGSGTHAAYPPLT-SVGHDEELSRPFIKPA--WPNPLQELRESDN-R 150
P P Y P T+ P + YPP+T S + P + P+ P+PL + +
Sbjct: 569 PPSPVYYPPVTNSPPPPSPVYYPPVTYSPPPPSPVYYPQVTPSPPPPSPLYYPPVTPSPP 628
Query: 151 QSSTVFNPPAYEQSEPPSDTNNEQADKEPDRIS-LHDEDTVESPWTPNTSSAXXXXXXXX 209
S V+ PP PPS P S ++ +SP P
Sbjct: 629 PPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPSETQSPPPPTEYYYSPSQSPPP 688
Query: 210 TDLMSRSREPSAEPGRAHP 228
T P A P P
Sbjct: 689 TKACKEGHPPQATPSYEPP 707
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.128 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,131,240
Number of Sequences: 28952
Number of extensions: 256662
Number of successful extensions: 647
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 42
length of query: 246
length of database: 12,070,560
effective HSP length: 79
effective length of query: 167
effective length of database: 9,783,352
effective search space: 1633819784
effective search space used: 1633819784
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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