Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001232-TA|BGIBMGA001232-PA|IPR001841|Zinc finger,
RING-type
(126 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 193 4e-50
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 193 4e-50
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 107 3e-24
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 58 2e-09
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 44 4e-05
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 40 4e-04
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 39 0.001
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 38 0.002
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 37 0.004
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 36 0.007
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 36 0.007
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 36 0.009
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 36 0.011
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 35 0.015
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 35 0.020
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 33 0.061
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.11
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 32 0.11
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 32 0.14
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 32 0.14
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 0.33
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 30 0.43
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 30 0.43
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 30 0.57
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 30 0.57
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 30 0.57
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 30 0.57
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 29 0.75
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 29 1.00
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 29 1.00
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 1.3
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 28 1.7
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z81581-12|CAE17944.1| 166|Caenorhabditis elegans Hypothetical p... 27 3.0
Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 27 3.0
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 27 4.0
Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 26 7.0
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 26 7.0
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 26 9.3
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 193 bits (470), Expect = 4e-50
Identities = 80/90 (88%), Positives = 83/90 (92%)
Query: 24 KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 83
KKRFEVKKW+AVALWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHA
Sbjct: 21 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHA 80
Query: 84 FHFHCISRWLKTRQVCPLDNREWEFQKQVH 113
FHFHCISRWLKTRQVCPLDNREWEFQK H
Sbjct: 81 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 193 bits (470), Expect = 4e-50
Identities = 80/90 (88%), Positives = 83/90 (92%)
Query: 24 KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 83
KKRFEVKKW+AVALWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHA
Sbjct: 12 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHA 71
Query: 84 FHFHCISRWLKTRQVCPLDNREWEFQKQVH 113
FHFHCISRWLKTRQVCPLDNREWEFQK H
Sbjct: 72 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 101
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 107 bits (256), Expect = 3e-24
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 23 DKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 82
+ + F +KKWNA+A+WAWD+ D CAICR H+M+ C+ CQ S S EC V WG CNH
Sbjct: 26 ESRPFVLKKWNALAVWAWDVECDTCAICRVHLMEECLRCQ----SEPSAECYVVWGDCNH 81
Query: 83 AFHFHCISRWLKTRQVCPLDNREW 106
+FH C+++W++ CPL ++W
Sbjct: 82 SFHHCCMTQWIRQNNRCPLCQKDW 105
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 57.6 bits (133), Expect = 2e-09
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 29 VKKWNAVALWAW-DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFH 87
VKK + W W D C ICR C N ++C + G+C HAFH H
Sbjct: 53 VKKLHVCGEWKWLQGGEDTCGICRMEFESAC-----NMCKFPGDDCPLVLGICRHAFHRH 107
Query: 88 CISRWL-----KTRQVCPLDNREW 106
CI +W+ + R CPL ++W
Sbjct: 108 CIDKWIAAPTNQPRAQCPLCRQDW 131
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 4e-05
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 74 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 104
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 4e-05
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 74 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 104
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 40.3 bits (90), Expect = 4e-04
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 23 DKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 82
D++ + +K +A D + +N I +H++ + + T+ TV C H
Sbjct: 59 DRETTDQQKEDATCAICLDNLQNNVDIPEDHVIK-----EELKIDPTTFGTTVIVMPCKH 113
Query: 83 AFHFHCISRWLKTRQVCPLDNREWEFQKQV 112
FH+ C++ WL+ +Q CP ++ + K+V
Sbjct: 114 RFHYFCLTLWLEAQQTCPTCRQKVKTDKEV 143
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 70 SEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 104
S E T+ C FH C S+W K + VCP NR
Sbjct: 147 STEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNR 181
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 37.9 bits (84), Expect = 0.002
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 80 CNHAFHFHCISRWLKTRQVCPL 101
CNH FH CI WLKT+ CP+
Sbjct: 256 CNHIFHRPCIEPWLKTKNSCPV 277
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 80 CNHAFHFHCISRWL-KTRQVCPLDNRE 105
C H FH +CI WL +TR++CPL R+
Sbjct: 265 CRHVFHCNCIDVWLTQTRKICPLCKRK 291
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 36.3 bits (80), Expect = 0.007
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C+H FH HC+ W + +Q CP
Sbjct: 310 CSHVFHAHCLRSWFQRQQTCP 330
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 36.3 bits (80), Expect = 0.007
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 79 VCNHAFHFHCISRWLKTRQVCP 100
VC H +H CIS+W+ T++ CP
Sbjct: 30 VCGHIYHHGCISQWIATKRQCP 51
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 59 IECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQVCPLDNRE 105
++C ++ S+EC + CNH+F F CIS W+ R CP+ ++
Sbjct: 66 LQCTICLSTRFSQECRIEG--CNHSFCFSCISEWVCQSLRPSCPMCRKD 112
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 35.5 bits (78), Expect = 0.011
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 60 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 103
EC + TV C +H C+ +W K +++CP N
Sbjct: 899 ECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTCN 942
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.015
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 80 CNHAFHFHCISRWLKTRQVCPLDNRE 105
CNH FH CI +WL + CP+ E
Sbjct: 451 CNHVFHPECIYKWLDINKRCPMCREE 476
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 34.7 bits (76), Expect = 0.020
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 80 CNHAFHFHCISRWLKTRQVCPL 101
C H FH C+ +WL + VCPL
Sbjct: 620 CKHYFHGPCLRKWLAVKMVCPL 641
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.061
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 60 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 100
EC + E TV C +H HC ++WL + CP
Sbjct: 527 ECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCP 567
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 32.3 bits (70), Expect = 0.11
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Query: 79 VCNHAFHFHCISRWLKTR---QVCPL 101
+C H F + C+S+WL TR QVCP+
Sbjct: 40 LCGHLFCWPCLSQWLDTRPNNQVCPV 65
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.11
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 60 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 103
EC E T+ C +H C +W K +++CP N
Sbjct: 890 ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTCN 933
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 31.9 bits (69), Expect = 0.14
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 80 CNHAFHFHCISRWLKTRQVCPL 101
C H FH C+ WL +++ CPL
Sbjct: 335 CGHEFHPKCVDPWLLSKRRCPL 356
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.14
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 80 CNHAFHFHCISRWLKTRQVCPL 101
C H F + C+ WLK++ CP+
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPM 75
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 30.7 bits (66), Expect = 0.33
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 79 VCNHAFHFHCISRWLKTRQVCPL 101
+CNH H + I+ W +T + CP+
Sbjct: 5021 ICNHGGHVNHIATWFETEKYCPV 5043
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 30.3 bits (65), Expect = 0.43
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 56 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 96
D+C+ C + A C + G C H FHFHC+ L+ R
Sbjct: 3515 DVCVICFTERLGAAP--C-IRLG-CGHMFHFHCVRMILERR 3551
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 30.3 bits (65), Expect = 0.43
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 80 CNHAFHFHCISRWLKTRQVCPL 101
C H +H CI WL + CP+
Sbjct: 245 CKHIYHKSCIDPWLLEHRTCPM 266
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 29.9 bits (64), Expect = 0.57
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C H+FH C+ WL CP
Sbjct: 113 CMHSFHQECVDEWLMKSFTCP 133
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 29.9 bits (64), Expect = 0.57
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 60 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 100
EC E T+ C +H C +W K +++CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.9 bits (64), Expect = 0.57
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C FH C ++WL ++ CP
Sbjct: 1044 CRRRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.9 bits (64), Expect = 0.57
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C FH C ++WL ++ CP
Sbjct: 1078 CRRRFHLECATKWLNEKRECP 1098
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 29.5 bits (63), Expect = 0.75
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C FH C ++WL ++ CP
Sbjct: 753 CRRRFHLKCATKWLNEKRECP 773
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 29.1 bits (62), Expect = 1.00
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 80 CNHAFHFHCISRWLKTRQVCPLDNRE 105
C H F CI WL + CP+ E
Sbjct: 352 CTHVFCKFCIETWLDQKSTCPICRAE 377
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 29.1 bits (62), Expect = 1.00
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 79 VCNHAFHFHCISRWL-KTRQVC 99
+CNH+FH C+ +W T VC
Sbjct: 275 LCNHSFHARCLEQWADNTCPVC 296
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.7 bits (61), Expect = 1.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C FH C ++WL ++ CP
Sbjct: 460 CRRRFHSKCATKWLNEKRECP 480
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 75 VAWGVCNHAFHFHCISRWLKTRQVCPL 101
V + C H+ C RWL + VCP+
Sbjct: 37 VTFLTCKHSICAGCAGRWLSSCSVCPM 63
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
protein R03G5.3 protein.
Length = 1311
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 58 CIECQANQASATSEECTVAWG--VCNHAFHF 86
C +C+ N S S+ CTV +G + N F++
Sbjct: 23 CTDCKINTISDVSKNCTVVYGDIIVNSTFNY 53
>Z81581-12|CAE17944.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Query: 58 CIECQANQASATSEE-------CT---VAWGVCNHAFHFHCISRWLKT 95
CI+C N A + +E C +A C +A H HCI W +T
Sbjct: 29 CIQCAPNSAWYSEQEEERRIEACRQGLLAPSPCTNATHTHCIVNWYRT 76
>Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Query: 58 CIECQANQASATSEE-------CT---VAWGVCNHAFHFHCISRWLKT 95
CI+C N A + +E C +A C +A H HCI W +T
Sbjct: 29 CIQCAPNSAWYSEQEEERRIEACRQGLLAPSPCTNATHTHCIVNWYRT 76
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C+H FH C+ WL CP
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCP 370
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 80 CNHAFHFHCISRWLKTRQVCP 100
C+H FH C+ WL CP
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCP 370
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 58 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--RQVCPL 101
C C T + + C + FH +C+ +W ++ + CPL
Sbjct: 1395 CTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPL 1440
>Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical
protein F37H8.1 protein.
Length = 284
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 77 WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQK 110
W + H HC+ R K +Q LD R+ +K
Sbjct: 208 WNLQMHVIALHCVGRQYKCKQCDYLDYRKSTMRK 241
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 80 CNHAFHFHCISRWLKT--RQVCPLDNREWEFQK 110
C H FH CI W+ Q CP + Q+
Sbjct: 333 CGHVFHEFCIRGWVVVGKLQTCPYCKERVDLQR 365
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 80 CNHAFHFHCISRWL--KTRQVCP 100
C+H FH C+ +L +T Q CP
Sbjct: 393 CSHIFHEKCLHTYLLQRTDQTCP 415
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/23 (34%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 92 WL-KTRQVCPLDNREWEFQKQVH 113
WL K +++CPL+N+ ++F ++++
Sbjct: 90 WLSKIKEMCPLNNKCFDFNRRIN 112
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.330 0.138 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,052,965
Number of Sequences: 27539
Number of extensions: 116636
Number of successful extensions: 373
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 332
Number of HSP's gapped (non-prelim): 43
length of query: 126
length of database: 12,573,161
effective HSP length: 73
effective length of query: 53
effective length of database: 10,562,814
effective search space: 559829142
effective search space used: 559829142
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 54 (25.8 bits)
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