Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001231-TA|BGIBMGA001231-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR004878|Protein of unknown
function DUF270
         (533 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   2.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   3.6  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 192 VCEWLNVVVQDTRDDIVDVAYDQPILFRYANISGHKQIDINDK 234
           + E +   +Q+ RDD    A D+ +   + +I   K +DI DK
Sbjct: 282 ISEIIETTIQEKRDD----AKDESVEAIFQSILRQKNLDIRDK 320


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 217 LFRYANISGHKQ--IDINDKLDNLTIEEIVDYPKPLLSVFNNNRTDI 261
           +FR  N+SG       +  +LD++   EI+  P   L VF  NR+++
Sbjct: 721 MFRKTNLSGDSSSGTTLLLELDDIASMEILYKPGDHLGVFACNRSEL 767


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,720
Number of Sequences: 429
Number of extensions: 6400
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 2
length of query: 533
length of database: 140,377
effective HSP length: 61
effective length of query: 472
effective length of database: 114,208
effective search space: 53906176
effective search space used: 53906176
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 46 (22.6 bits)