Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001231-TA|BGIBMGA001231-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR004878|Protein of unknown
function DUF270
(533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-11
SB_18107| Best HMM Match : DUF270 (HMM E-Value=0.0004) 41 0.002
SB_23818| Best HMM Match : PsbL (HMM E-Value=6.8) 32 1.0
SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 30 4.1
SB_2794| Best HMM Match : RNA_pol_Rpb5_C (HMM E-Value=7.2) 30 5.4
SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 7.1
SB_25826| Best HMM Match : Ank (HMM E-Value=6.7e-37) 29 9.4
SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7) 29 9.4
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 68.5 bits (160), Expect = 1e-11
Identities = 115/528 (21%), Positives = 213/528 (40%), Gaps = 56/528 (10%)
Query: 30 ESESMTVALSAFYAKLLIVLGIALPVTSTIQNELYTNITSDIFTMYLYVISMLFLAYTFY 89
+ +S + LS F+ + + GI L + N+ ++F +++++++ Y
Sbjct: 1093 DGDSGSKHLSIFHWTITVTFGIVLLLGREASNDKVPLSVFEVFQAIYMCLAVIWMSCVTY 1152
Query: 90 HLRMARRYKDDNVKRTRYGSFYLHIGVAGFGVGSIIYS-CLQFGEYFDLSGDCQLTIVAV 148
+ R + K G YL GV F VGS + C G LS C+ +
Sbjct: 1153 CCQ-GRCCIPKHPKSRIPG--YLIFGVTFFLVGSSFLTLCKIVGILLGLS--CEKETQSY 1207
Query: 149 KPVLRILYLVAQTVFI-FSYTDVLDPMRGVVIDRFG----LMHLIATNVCEWLNVVVQDT 203
K LY ++ VF+ F +R+G LMH+I N+C W V+++++
Sbjct: 1208 K-ASHALYHFSKFVFLNFQLYFFCRFSNKSFFNRWGSSFFLMHIIGVNMCSWFYVIIEES 1266
Query: 204 RDDIVDV----AYDQPI--------LFRYANISGHK-----QIDINDKLDNL--TIEEIV 244
+D+ Y Q L + AN + + + L NL ++++
Sbjct: 1267 AEDMKPTKPPNTYSQSCNATMAMENLIKKANYFLYPFEIEYSVMSSGLLFNLWYSLKQPP 1326
Query: 245 DYPKPLLSVFNNNRTDIGSKPSKKSKAFKEIKQCC-ARVKSNNHFSVDCGSAHKGLFMGI 303
DY S N+ G SK CC + +S+ + K G
Sbjct: 1327 DYNSVESSDANSETNGNGIFSSKFCGLSAACSTCCKCKPESSPQGHARTVAFWKNAICGF 1386
Query: 304 AVLAGTIVSLMLFNGLFQKKQHVELALLQINIWET------ILFVLMTIASAACIQRMRA 357
++ T+V L++ + E + +IN W +++++M AS I +
Sbjct: 1387 SIGIITLVGLLVLIICV----YAEKDVARINPWNAYYGVRILIYIMMAFASLVGINCLVH 1442
Query: 358 LPLRKAVSSLQLEHALLLVTQCGVYLYYLFQIIGTGFL-LKRYSEGSRATR-IISPLCAV 415
+ S ++ LL++ G ++ FQI+ GF LK + + T ++ + A
Sbjct: 1443 FHPSSSSSHTIVDTVLLMIGISGAFILTGFQIV-VGFTELKSKRDKTYVTFFLLDAVAAT 1501
Query: 416 IQSSCQTLLVLDAWARRSTS--NGRQRPG---------RQLITFLLVGNFALWLLNRVKN 464
+Q + QTL V+ A R + S N R RQ+ L + NFALW +N +
Sbjct: 1502 VQFTVQTLFVIRALLRSAESYDNEVYRDVSIRTLSWFIRQIAALLSIVNFALWAMNTFEI 1561
Query: 465 GRAEFHPLQMEFYGVWAWTLITHVSAPLLVCYRFQATVCLYEVWKNSY 512
E + ++ W+++ H++ PL + +R + C +E+ N +
Sbjct: 1562 NFKEMNNPEISVIDSTVWSVVRHIAYPLCIFFRLHSVFCCFEIVINRF 1609
>SB_18107| Best HMM Match : DUF270 (HMM E-Value=0.0004)
Length = 595
Score = 41.1 bits (92), Expect = 0.002
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 16/208 (7%)
Query: 3 KNKEKSNQSASREWRERSEPLLAVPEDESESMTVALSAFYAKLLIVLGIALPVTSTIQNE 62
+ K K ++ S EP+L P+D + S Y L G+ ++ +Q +
Sbjct: 54 EKKSKYSRFVSTSLMFLLEPIL--PDDGVKGDGKIASVMYLICLTTAGVVFNLSQWLQAD 111
Query: 63 LYTN--ITSDIFTMYLYVI---SMLFLAYTFYHLRMARRYKDDNVKRTRYGSFYLHIGVA 117
+ +T+D +L ++L++ Y F + R D + + + L G
Sbjct: 112 AKADSGVTADHIDGFLITCILPALLWICYIF--CKQNDRKTVDFITPSPHSHRPLMAGAY 169
Query: 118 GFGVGSIIYSCLQFGEYFDLSGDCQLTIVAVKPVLRILYLVAQTVFIFSY-TDVLDPMRG 176
FG GS + L Y + S + +V + +++ +Q +F+ + T L
Sbjct: 170 VFGAGSCVMDLLHIAFYVECSSNLPSLFFSV---FKAVFIFSQILFLRKFATATLHKSPS 226
Query: 177 VVIDRFGLMHLIATNVCEWLNVVVQDTR 204
+ R L H++ TNVC W + +R
Sbjct: 227 I---RLVLFHILGTNVCIWFRALFSHSR 251
>SB_23818| Best HMM Match : PsbL (HMM E-Value=6.8)
Length = 377
Score = 32.3 bits (70), Expect = 1.0
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 78 VISMLFLAYTFYHLRMARRYKDDNVKRTRYGSFYLHIGVAGFGVGSIIYSCLQFGEYF 135
+I ++ +A+T YH+ Y DD + R SF + F VG ++ C F E +
Sbjct: 29 MIVVIIVAFTSYHITS---YGDDRNRAMRQYSFTFSLAYLAFLVGELLRRCCLFAEEY 83
>SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 30.7 bits (66), Expect = 3.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 78 VISMLFLAYTFYHLRMARRYKDDNVKRTRYGSFYLHIGVAGFGVGSIIYSCLQFGEYF 135
+I ++ +A+T YH+ Y DD + R SF F VG ++ C F E +
Sbjct: 29 MIVVIIVAFTSYHITS---YGDDRNRAMRQYSFTFSSAYLAFLVGELLRRCCLFAEEY 83
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 30.3 bits (65), Expect = 4.1
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 6/121 (4%)
Query: 176 GVVIDRFGLMHLIATNVCEWLNVVVQDTRDDIVDVAYDQPILFRYANISGHKQIDINDKL 235
G V F +M+ + L++V + R+ + Q +L +++I ++D D
Sbjct: 172 GRVCLSFSIMYKVNNGPIRSLDIVCKSRREFDIWTCGIQALLSGFSDIQAMNKVDFEDSQ 231
Query: 236 DNLTIEEIVDYPKPLLSVFNNNRTDIGSKPSKKSKAFKEIKQCCARVKSNNHFSVDCGSA 295
D + ++F+ D G + K QC + + + V CGS
Sbjct: 232 DQTDSGTVEG------ALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSF 285
Query: 296 H 296
H
Sbjct: 286 H 286
>SB_2794| Best HMM Match : RNA_pol_Rpb5_C (HMM E-Value=7.2)
Length = 371
Score = 29.9 bits (64), Expect = 5.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 55 VTSTIQNELYTNITSDIFTMYLYVISMLFLAYTFYHLRMARRYKDDNVKRTRYGSFYLHI 114
+T+T + LY I D+FT Y V+S + L F HL + DN + R G+ L +
Sbjct: 52 MTTTCNHALYAVI--DVFTQYFDVLSDVLLDDMFVHLLWC--VQQDNEQLARSGTNCLEL 107
Query: 115 GVAGFG 120
V G
Sbjct: 108 LVVSNG 113
>SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.9 bits (64), Expect = 5.4
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 6 EKSNQSASREWRERSEPLLAVPEDE--SESMTVALSAFYA-KLLIVLGIALPVTSTIQNE 62
EK ++A ++ E+S PL D+ S+++ V L+ A L ++ I + V T
Sbjct: 162 EKGERTADQD--EQSNPLPEQQTDDAASDAIHVTLTTSVALSLYFIITIMMGVGLTAVIC 219
Query: 63 LYTNITSDIFTMYLYVISMLFLAYTFYHLR 92
YT +D T Y YVI+ L Y +Y R
Sbjct: 220 YYTQ--ADPHTAYSYVITRLRFYYYYYFRR 247
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.5 bits (63), Expect = 7.1
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 159 AQTVFIFSYTDVLDPMRGV-VIDRFGLMHLIATNVCEWLNVVVQDTRDDIVDVAYDQPIL 217
AQT + S T VLD V V D+ I N+ ++++ + RD D + IL
Sbjct: 5259 AQTATV-SIT-VLDENDNVPVFDQEVYSVSIPENITVGAHILLLNARDK--DEGVNAEIL 5314
Query: 218 FRYANISGHKQIDINDKLDNLTIEEIVDY 246
+ ++ K+ +ND +TI++ VDY
Sbjct: 5315 YFLKDVIASKRFSMNDTTGQITIKQAVDY 5343
>SB_25826| Best HMM Match : Ank (HMM E-Value=6.7e-37)
Length = 1041
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 203 TRDDIVDVAYDQPILFRYANISGHKQIDINDKLDNLTIEEIVDYPK 248
T+D+I + D+ F + N + HK++ ++ LT++E VD PK
Sbjct: 168 TQDEIPNFLSDEECDF-FINYAKHKRMMFSEARGGLTLKEQVDVPK 212
>SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7)
Length = 433
Score = 29.1 bits (62), Expect = 9.4
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 204 RDDIVD----VAYDQPILFRYANISGHKQIDINDKLDNLTIEEIVDYPK----PLLSVFN 255
RDD +D AY F Y ++ HK I+ D++ I E V P+ LL +F
Sbjct: 269 RDDNLDRSAAAAYQNGTTFFYEQVNLHKTFVISKGTDSI-INESVSLPRRSMSGLLLLFV 327
Query: 256 NNRTDIGSKPSKKSKAFKEIKQCCARVKS 284
T G++ S+K + +IK CA ++S
Sbjct: 328 EPYT-AGARDSEKF-VYPDIKSVCAALQS 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,055,504
Number of Sequences: 59808
Number of extensions: 686010
Number of successful extensions: 2213
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2205
Number of HSP's gapped (non-prelim): 18
length of query: 533
length of database: 16,821,457
effective HSP length: 85
effective length of query: 448
effective length of database: 11,737,777
effective search space: 5258524096
effective search space used: 5258524096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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