GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001231-TA|BGIBMGA001231-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR004878|Protein of unknown
function DUF270
         (533 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    25   5.1  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    25   5.1  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           25   5.1  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           25   5.1  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 276 KQCCARVKSNNHFSVDCGSAHKGLFMGIAVLAGTIVSLMLFN 317
           K  C R K NN   +  G   K L  GI +   T+V    FN
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQK-LRDGITLTLSTLVDGKNFN 268


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 214 QPILFRYANISGHKQIDINDKLDN 237
           QP+LF Y +   HKQ  I D + +
Sbjct: 235 QPLLFTYTDDGRHKQRPIRDAISS 258


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 276 KQCCARVKSNNHFSVDCGSAHKGLFMGIAVLAGTIVSLMLFN 317
           K  C R K NN   +  G   K L  GI +   T+V    FN
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQK-LRDGITLTLSTLVDGKNFN 268


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 276 KQCCARVKSNNHFSVDCGSAHKGLFMGIAVLAGTIVSLMLFN 317
           K  C R K NN   +  G   K L  GI +   T+V    FN
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQK-LRDGITLTLSTLVDGKNFN 268


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,130
Number of Sequences: 2123
Number of extensions: 22009
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 4
length of query: 533
length of database: 516,269
effective HSP length: 67
effective length of query: 466
effective length of database: 374,028
effective search space: 174297048
effective search space used: 174297048
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)