Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001230-TA|BGIBMGA001230-PA|IPR004878|Protein of unknown
function DUF270
(503 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical pr... 73 5e-13
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 60 5e-09
Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 58 1e-08
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 58 2e-08
U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical pr... 51 2e-06
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 48 2e-05
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 39 0.009
AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical ... 39 0.009
Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical pr... 30 4.4
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 29 7.7
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 29 7.7
>U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical
protein F14B8.7 protein.
Length = 566
Score = 72.9 bits (171), Expect = 5e-13
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 222 GSFYLRLGAIAFGIGSMVYSGLEFG----EYFEMTDQCRSILAVITPALRMTLTLAQMPF 277
GS YLRLG + FGI +VY L F + +C S+++ + + QM F
Sbjct: 141 GSLYLRLGCVVFGIIGVVYYLLIFVICLLGWSSNEGEC-SVISDVLNVMAAVFIFVQMWF 199
Query: 278 IFLTNKDIELGSHKMIQRFGFMHMLATNLCEWL-YVLVE--ETKHEIHHLEHAMLSPENT 334
++ K I G + RFG MH+ TNL WL Y+L E ET EI H++HA LS +
Sbjct: 200 VYCNGKIIFTGDGNLA-RFGLMHLTGTNLWMWLRYILYEEVETVKEIRHVQHANLSKASA 258
Query: 335 THNVTEEISCR 345
H+ E +C+
Sbjct: 259 HHHEVHEEACK 269
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 59.7 bits (138), Expect = 5e-09
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 213 KIKETISRYGSFYLRLGAIAFGI-GSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLT 271
K+ + GS +LRLG++ FG+ G + Y+ L F E+ C S L+ +
Sbjct: 189 KVTHSSPSAGSLFLRLGSVVFGVTGVVYYAFLVF--LCELDPNC-SALSTSLDVCAILFI 245
Query: 272 LAQMPFIFLTNKDIELGSHKMIQRFGFMHMLATNLCEWL-YVLVEE--TKHEIHHLEHAM 328
QM FIF K GSH M+ R G MH++A NL W+ YVL+EE + EI + +
Sbjct: 246 FIQMHFIFCNWKLSITGSH-MVARVGTMHLVAANLWTWIRYVLMEEGVMEKEIREVFNHR 304
Query: 329 LSPENTTHNVTEEISCRRSNIMGALLQPG 357
N + + + S N M L G
Sbjct: 305 PPGHNYMRSNSSDSSSSAENSMEQFLGDG 333
>Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 58.0 bits (134), Expect = 1e-08
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 222 GSFYLRLGAIAFGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFLT 281
G+ YLRLGA+ FG +V GLE E C+ + A+ + + T QM FIF
Sbjct: 155 GTLYLRLGALFFGSVGIVLFGLELFLCIENV-ACKKV-AIAKMIVAIVFTFIQMHFIFCN 212
Query: 282 NKDIELGSHKMIQRFGFMHMLATNLCEWLYVLVEETKHEIH 322
+K I + S + I FG MH+++ NL W ++ + + + H
Sbjct: 213 SK-ITVNSSRKIVAFGMMHLISVNLWTWFRFVLAKQEAKAH 252
>AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 58.0 bits (134), Expect = 1e-08
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 222 GSFYLRLGAIAFGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFLT 281
G+ YLRLGA+ FG +V GLE E C+ + A+ + + T QM FIF
Sbjct: 155 GTLYLRLGALFFGSVGIVLFGLELFLCIENV-ACKKV-AIAKMIVAIVFTFIQMHFIFCN 212
Query: 282 NKDIELGSHKMIQRFGFMHMLATNLCEWLYVLVEETKHEIH 322
+K I + S + I FG MH+++ NL W ++ + + + H
Sbjct: 213 SK-ITVNSSRKIVAFGMMHLISVNLWTWFRFVLAKQEAKAH 252
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 57.6 bits (133), Expect = 2e-08
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 222 GSFYLRLGAIAFGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFLT 281
G+ YLR+GA+ FG V G E F D R + V+ L + T QM FIF +
Sbjct: 126 GTMYLRVGALFFGSMGSVLWGTEILLCF--FDNQRHGIYVVKYILAVIFTFMQMHFIF-S 182
Query: 282 NKDIELGSHKMIQRFGFMHMLATNLCEWLYV-LVEET-KHEIHHLEHAMLSPENTT 335
N I L +I +FG MH +A NL WL + L++ + KH +++ +N T
Sbjct: 183 NSKISLKRSNIIAKFGLMHSVAVNLWNWLSICLIKSSIKHAKKEIKYTYEGSDNET 238
>U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical
protein F45F2.7 protein.
Length = 623
Score = 50.8 bits (116), Expect = 2e-06
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 222 GSFYLRLGAIAFGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFLT 281
G+ YLRLGAI FG V G E + + +C L V + T QM FI +
Sbjct: 157 GTLYLRLGAIFFGTLGSVLWGCEI--FLCFSGECVHRLVVAKHIAAIIFTFLQMHFI-VC 213
Query: 282 NKDIELGSHKMIQRFGFMHMLATNLCEWLYVL-----VEETKHEIHHLE-HAMLSPENTT 335
N I ++ FG MH +A NL W + V++ K + LE H+ S + +
Sbjct: 214 NSKITFHRSNILASFGMMHCVAVNLWTWFSMCLVKAQVKKLKKQKKELEYHSSSSSSSDS 273
Query: 336 HNVTEEI 342
+ +EEI
Sbjct: 274 SSSSEEI 280
Score = 41.9 bits (94), Expect = 0.001
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 376 VDCSHAHRGLSAGXXXXXXXXXXXXMFFVLANNPDTVIDAIFEVNVCELVLYTMTLIAAG 435
+DC + GL G ++ +L N T A + + L+L+ +TL+A
Sbjct: 380 MDCHNTTIGLFLGIFFMTAAFVTIGIYTMLYNKKKTQ-SADLVIGIVNLILFCVTLLATI 438
Query: 436 AALLQMRALPYKRKSQAVLGLDTSLLILAQTGMFVYCMFSLIGCHHTMNSNNSSGY 491
+MR L Y+ + + +D LLI+ G +YC IG +N N + +
Sbjct: 439 FGAWRMRVLQYRLHAHGEV-IDEILLIIGLVGELIYCS---IGFDMIVNGNRTGSH 490
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 47.6 bits (108), Expect = 2e-05
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 222 GSFYLRLGAIAFG-IGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFL 280
G+ YLRLG + FG +GS+++ F +F T R + V+ L T QM F+
Sbjct: 143 GTLYLRLGTVLFGTLGSVLWGCEIFLCFFTET---RHNIYVVKYILAFLFTYLQMHFLCC 199
Query: 281 TNKDIELGSHKMIQRFGFMHMLATNLCEW 309
+K I+L + + FG MH +A NL W
Sbjct: 200 NSK-IDLPKNNFLASFGMMHCVAVNLWVW 227
Score = 45.6 bits (103), Expect = 8e-05
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 360 GVSSPHGSRTALHHFSVDCSHAHRGLSAGXXXXXXXXXXXXMFFVLANNPDTVIDAIFEV 419
G +P +R H DC G+ A M ++ NN D A +
Sbjct: 327 GEQTPQDARKK--HVRFDCKSTSVGIFAAIVLLIGSFISIAMHYIY-NNSDMPRTADEVI 383
Query: 420 NVCELVLYTMTLIAAGAALLQMRALPYKRKSQAVLGLDTSLLILAQTGMFVYCMFSL 476
+ E VL+ + L+A A ++MR L Y+ + + +D LLI+ G VYC L
Sbjct: 384 GIAETVLFCVCLLAVFGAFIRMRKLQYRLHAHGQV-VDEILLIVGLAGEIVYCSTGL 439
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 233 FGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFLTNKDIELGSHKM 292
F IG++V +E + R + ++ L + + Q+ F+ ++++ +E H+M
Sbjct: 12 FSIGAIVLWSIEL--FLAFAQSVRPWICILRTCLYIIFHVTQVVFVSISHR-VEFHYHRM 68
Query: 293 IQRFGFMHMLATNLCEWLYVLVEET 317
I FG H +A NL W + + ++
Sbjct: 69 IVYFGLSHTIAVNLWIWASLCIAKS 93
>AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical
protein D1065.1 protein.
Length = 585
Score = 38.7 bits (86), Expect = 0.009
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 222 GSFYLRLGAIAFG-IGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMPFIFL 280
G+ YLR+G + FG +G+++Y +F D R+ + V L + QM FIF
Sbjct: 146 GTMYLRIGTLFFGSMGAVLYITEILLCFF---DTQRNGIYVTKYTLAVAFIYMQMHFIF- 201
Query: 281 TNKDIELGSHKMIQRFGFMHMLA 303
+N + L S I +FG MH +A
Sbjct: 202 SNSKVLLKSSNAIAKFGLMHSVA 224
>Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical
protein T28B11.1 protein.
Length = 573
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 38 LIQHSHSQPNSRRMSSDIETKQLAANLNTRRPSAIIAAFRRPSQALALCAATQRRFLSEL 97
+IQ + +P SRRM IE + + T P + ++ RP A ++ + R+ S L
Sbjct: 467 VIQLKYCKP-SRRMVLTIEREDSPIPVTTLTPVSSLSRLARPQSAASVLSTPLRKISSSL 525
Query: 98 TPHS 101
P S
Sbjct: 526 KPVS 529
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 64 LNTRRPSAIIAAFRRPSQALALCAATQRRFLSELTPHSRASMASTIHETAPSAAEILGH 122
L +R S IA +R+ S AL + + L L HSRA S+ H T +++ H
Sbjct: 848 LTRQRFSRQIALYRK-SVALLKNSKEIEKILFRLNEHSRAKYTSSAHSTIRDLEKLVSH 905
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 64 LNTRRPSAIIAAFRRPSQALALCAATQRRFLSELTPHSRASMASTIHETAPSAAEILGH 122
L +R S IA +R+ S AL + + L L HSRA S+ H T +++ H
Sbjct: 848 LTRQRFSRQIALYRK-SVALLKNSKEIEKILFRLNEHSRAKYTSSAHSTIRDLEKLVSH 905
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,027,277
Number of Sequences: 27539
Number of extensions: 355576
Number of successful extensions: 807
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 791
Number of HSP's gapped (non-prelim): 14
length of query: 503
length of database: 12,573,161
effective HSP length: 84
effective length of query: 419
effective length of database: 10,259,885
effective search space: 4298891815
effective search space used: 4298891815
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)
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