GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001229-TA|BGIBMGA001229-PA|undefined
         (66 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3VQS1 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_A5DTP3 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  

>UniRef50_A3VQS1 Cluster: Putative uncharacterized protein; n=1;
           Parvularcula bermudensis HTCC2503|Rep: Putative
           uncharacterized protein - Parvularcula bermudensis
           HTCC2503
          Length = 493

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query: 17  RSSTVRSLAAVEMLAAPSPRTVR 39
           R +T+R L A+E L AP+PRT R
Sbjct: 142 RPATLRGLFAIERLVAPAPRTAR 164


>UniRef50_A5DTP3 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 488

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 11  EYQLWWRSSTVRSLAAVEMLAAPSPRTVR 39
           EY  WWR  T+  L+ ++ L+  SPR +R
Sbjct: 337 EYNQWWRDHTLTYLSNLKQLSNASPRLLR 365


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.326    0.131    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,183,145
Number of Sequences: 1657284
Number of extensions: 1540929
Number of successful extensions: 4888
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4886
Number of HSP's gapped (non-prelim): 2
length of query: 66
length of database: 575,637,011
effective HSP length: 46
effective length of query: 20
effective length of database: 499,401,947
effective search space: 9988038940
effective search space used: 9988038940
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)