Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001228-TA|BGIBMGA001228-PA|IPR004878|Protein of unknown
function DUF270
(448 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical pr... 95 7e-20
AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical ... 93 3e-19
Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 92 8e-19
AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 92 8e-19
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 89 8e-18
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 87 2e-17
U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical pr... 85 7e-17
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 81 2e-15
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical ... 31 2.2
U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in ge... 30 3.8
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 30 3.8
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 29 5.0
>U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical
protein F14B8.7 protein.
Length = 566
Score = 95.5 bits (227), Expect = 7e-20
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 207 RIPTANEENDFTSNIVIYADCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGY 266
R+ E ++ DC + +GLFAG +++ + + +SS + + +
Sbjct: 306 RLKREQMEKKMKKRSILKIDCSRTAEGLFAGFACIIVTIIAIALFNAYSS-DKNVAQWIF 364
Query: 267 LLNNCTKLTLHTLMLIASLVTLNQLRKL----DINEHPISLLDDVLLFICLPAFFMETFF 322
N + + T +++ + + L+ L D + LLD +LL + L + +
Sbjct: 365 SCTNMSFFLVSTFLVVFAFWRMRYLKFLMEDDDEEDDNAELLDRILLVVGLIGELIFSIG 424
Query: 323 SLIATISILNI-VKTIDF---IVMFIQVTIQTPLIM--DGLRRCSNTKKLRRSKPGRELL 376
+++ I+ + I + I F ++ IQVT Q+ L+M LR + + + R KPG++++
Sbjct: 425 GILSFINNMTIGLPLIIFTTNVLRLIQVTFQSCLLMVASRLRIEESNQHMLRYKPGKQVI 484
Query: 377 MFLLIANVGMWLLYTFSYKSPESLDERYAFYGKVLWSILGHVSLPLIMFYRFHSSVCFAD 436
LL+ N +++ F + DE YG W+I+ PL +FYRFHSS CFA+
Sbjct: 485 TMLLMMNCAQFMMNVFEAQKAGINDEMIHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAE 544
Query: 437 IWDSAYKP 444
IW ++P
Sbjct: 545 IWKKTFRP 552
Score = 63.7 bits (148), Expect = 3e-10
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 44 SGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVMFPLYCFV 103
+GS YL+LG F + +++ +L+ + + L N +C +++ VL+VM ++ FV
Sbjct: 140 TGSLYLRLGCVVFGIIGVVYYLLIFVICL---LGWSSNEGEC-SVISDVLNVMAAVFIFV 195
Query: 104 QLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWVSAIVRETI 147
Q++F++ +I NLARF MH+ G++L W+ I+ E +
Sbjct: 196 QMWFVYCNGKIIFTGDGNLARFGLMHLTGTNLWMWLRYILYEEV 239
>AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical
protein D1065.1 protein.
Length = 585
Score = 93.5 bits (222), Expect = 3e-19
Identities = 59/226 (26%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 226 DCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCTKLTLHTLMLIASL 285
DC+ ++ GLF + + +I +++IG + + ++ L T + + ++L A L
Sbjct: 345 DCNGTSVGLFTAIFIHII--SVVVIGLHGIYMKDHNEKVADQLIGYTDVLMFVILLFACL 402
Query: 286 VTLNQLRKLDINEHPIS-LLDDVLLFICLPAFFMETFFSLIATISILNIVKTIDFIVMFI 344
+ L Q+RKL H ++DD+LL + L + + ++ ++ + + + +I M
Sbjct: 403 LALFQMRKLQYTSHVHGEVIDDILLIVGLAGECVYSCAAIDLYVNEKLMDRPVPYITMIA 462
Query: 345 ------QVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLLYTFSYKSPE 398
+V +QT I+ R S+ L +PG++++ FLLI N+ +++ +TF E
Sbjct: 463 FSLRITEVIVQTLFILIAARMRSSP--LSNKQPGKQVITFLLICNINLFIYHTF-----E 515
Query: 399 SLDERYAFYGKV--LWSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
+ + + F KV +++++ ++ P+++FYRFHSS C A+IW + Y
Sbjct: 516 TTESSFGFPAKVSEVYTVMLTIASPIVVFYRFHSSACLAEIWKNTY 561
Score = 35.1 bits (77), Expect = 0.10
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 30 IPMLHQYCFSQ----GRHSGSFYLKLGAAGF-ALGHLIHSVLLLAVQIGHFLDEDVNNDD 84
I LH++ + G +G+ YL++G F ++G +++ +L F D N
Sbjct: 127 IASLHRWLLEEPVFNGEGAGTMYLRIGTLFFGSMGAVLYITEILLC----FFDTQRNG-- 180
Query: 85 CVNILQVVLDVMFPLYCFVQLYFIFKYSNVIILRYQNLARFAFMHMI 131
+ + + L V F ++Q++FIF S V++ +A+F MH +
Sbjct: 181 -IYVTKYTLAVAF---IYMQMHFIFSNSKVLLKSSNAIAKFGLMHSV 223
>Z69717-4|CAA93534.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 91.9 bits (218), Expect = 8e-19
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 17/244 (6%)
Query: 213 EENDFTSNIVIYADCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCT 272
+ N + + DC +S+ GLFAG+I ++ + + +F S+ L+
Sbjct: 346 QSNSGKRKVKMRIDCSSSSTGLFAGIIFLIGSLVSMGMYTIFESLRNS--SGAQLVFGIV 403
Query: 273 KLTLHTLMLIASLVTLNQLRKLDINEHPIS-LLDDVLLFICLP------AFFMETFFSLI 325
L+L ++ L A ++ L ++R L H ++D++LL I L A ++ F +
Sbjct: 404 DLSLFSIALGACIIGLWRMRHLQYRLHAHGEVIDEILLIIGLIGEILYCAVGIDVFITCR 463
Query: 326 ATISI-LNIVKTIDFIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANV 384
+ + ++ + F++ IQV +Q I+ R +K + KPG+E++ FLL++NV
Sbjct: 464 RSADLTVSALPAFVFVIRMIQVVVQAAFILTTSRLRCLSKYSMKYKPGKEIITFLLVSNV 523
Query: 385 GMWLLYTFSYKSPESLDERYAFYGKVL--WSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
+++ +TF E + + F K ++ + + PL++FYRFHSS C A+IW Y
Sbjct: 524 TLFVFHTF-----EGMKSSFGFSSKAATQYNYIIYAVGPLLVFYRFHSSACLAEIWKHTY 578
Query: 443 KPGS 446
S
Sbjct: 579 STKS 582
Score = 39.1 bits (87), Expect = 0.006
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 41 GRHSGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDC--VNILQVVLDVMFP 98
G +G+ YL+LGA F G + ++L +++ FL + N C V I ++++ ++F
Sbjct: 151 GEGAGTLYLRLGALFF--GSV--GIVLFGLEL--FLC--IENVACKKVAIAKMIVAIVFT 202
Query: 99 LYCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFW 138
F+Q++FIF S + + + + F MH+I +L W
Sbjct: 203 ---FIQMHFIFCNSKITVNSSRKIVAFGMMHLISVNLWTW 239
>AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 91.9 bits (218), Expect = 8e-19
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 17/244 (6%)
Query: 213 EENDFTSNIVIYADCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCT 272
+ N + + DC +S+ GLFAG+I ++ + + +F S+ L+
Sbjct: 346 QSNSGKRKVKMRIDCSSSSTGLFAGIIFLIGSLVSMGMYTIFESLRNS--SGAQLVFGIV 403
Query: 273 KLTLHTLMLIASLVTLNQLRKLDINEHPIS-LLDDVLLFICLP------AFFMETFFSLI 325
L+L ++ L A ++ L ++R L H ++D++LL I L A ++ F +
Sbjct: 404 DLSLFSIALGACIIGLWRMRHLQYRLHAHGEVIDEILLIIGLIGEILYCAVGIDVFITCR 463
Query: 326 ATISI-LNIVKTIDFIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANV 384
+ + ++ + F++ IQV +Q I+ R +K + KPG+E++ FLL++NV
Sbjct: 464 RSADLTVSALPAFVFVIRMIQVVVQAAFILTTSRLRCLSKYSMKYKPGKEIITFLLVSNV 523
Query: 385 GMWLLYTFSYKSPESLDERYAFYGKVL--WSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
+++ +TF E + + F K ++ + + PL++FYRFHSS C A+IW Y
Sbjct: 524 TLFVFHTF-----EGMKSSFGFSSKAATQYNYIIYAVGPLLVFYRFHSSACLAEIWKHTY 578
Query: 443 KPGS 446
S
Sbjct: 579 STKS 582
Score = 39.1 bits (87), Expect = 0.006
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 41 GRHSGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDC--VNILQVVLDVMFP 98
G +G+ YL+LGA F G + ++L +++ FL + N C V I ++++ ++F
Sbjct: 151 GEGAGTLYLRLGALFF--GSV--GIVLFGLEL--FLC--IENVACKKVAIAKMIVAIVFT 202
Query: 99 LYCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFW 138
F+Q++FIF S + + + + F MH+I +L W
Sbjct: 203 ---FIQMHFIFCNSKITVNSSRKIVAFGMMHLISVNLWTW 239
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 88.6 bits (210), Expect = 8e-18
Identities = 57/233 (24%), Positives = 119/233 (51%), Gaps = 17/233 (7%)
Query: 226 DCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCTKLTLHTLMLIASL 285
DC +++ G+FA ++L++ + + +++++ + + + L + L+A
Sbjct: 342 DCKSTSVGIFAAIVLLIGSFISIAMHYIYNN--SDMPRTADEVIGIAETVLFCVCLLAVF 399
Query: 286 VTLNQLRKLDINEHPIS-LLDDVLLFICLPA--FFMETFFSLIATISILNIVKT-----I 337
++RKL H ++D++LL + L + T L + N T +
Sbjct: 400 GAFIRMRKLQYRLHAHGQVVDEILLIVGLAGEIVYCSTGLDLYLNGRLENTPGTSCLTVV 459
Query: 338 DFIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLLYTFSYKSP 397
F++ +QV +Q+ I+ R S + ++PG++++ FL++ N+ +++ +TF
Sbjct: 460 AFVMRIVQVVVQSVFILVASRLRSLSASNISNQPGKQIVTFLVVCNINLFIYHTF----- 514
Query: 398 ESLDERYAFYGKV--LWSILGHVSLPLIMFYRFHSSVCFADIWDSAYKPGSEH 448
E+++ + F K+ ++S L ++S PL++FYRFHSS C A+IW AY H
Sbjct: 515 ETIESNFGFPHKMSSVYSALLNISSPLVVFYRFHSSACLAEIWKHAYSKKYNH 567
Score = 33.9 bits (74), Expect = 0.23
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 41 GRHSGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVMFPLY 100
G +G+ YL+LG F + SVL F E +N + VV ++ L+
Sbjct: 139 GEGAGTLYLRLGTVLFGT---LGSVLWGCEIFLCFFTETRHN------IYVVKYILAFLF 189
Query: 101 CFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWVSAIVRETI 147
++Q++F+ S + + + LA F MH + +L W S + + +
Sbjct: 190 TYLQMHFLCCNSKIDLPKNNFLASFGMMHCVAVNLWVWFSLCLAKAV 236
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 87.4 bits (207), Expect = 2e-17
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 223 IYADCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGE-EFLELGYLLNNCTKLTLHTLML 281
I DC + GLF GL + + +++ + F+ + + + Y + + L T+ +
Sbjct: 401 IRVDCSKTTTGLFLGLAFLAVTFTSMVVYYGFTMMNKSQSAAFVYAFTDMFQYVLSTIGV 460
Query: 282 IASLVTLNQLR----KLDINEHPISLLDDVLLFICLPAFFMETFFSLIATISILNIVK-- 335
+ ++ + L+ K + LLD +LL I L E +S+ + + +
Sbjct: 461 LTAIYQMRALKYFNKKTKLQNSDQELLDQILLSIGLVG---ELIYSVAGLVGLTGEKQWT 517
Query: 336 TIDFIVMF------IQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLL 389
FI++F IQV QT ++ R + R ++PG++ + FLL AN+ ++ +
Sbjct: 518 NFSFILLFVHIFRLIQVGTQT-FLLHVARSVRMGCEHREAQPGKQAITFLLTANLAIFFM 576
Query: 390 YTFSYKSPESLDERYAFYGKVLWSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
F + + +YGK W L PL +FYRFHSSVCFA+IW + Y
Sbjct: 577 NLFESEKAGVSEMIIEYYGKRSWVFLVRSFSPLTIFYRFHSSVCFAEIWKNVY 629
Score = 43.6 bits (98), Expect = 3e-04
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 44 SGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVMFPLYCFV 103
+GS +L+LG+ F + +++ L+ FL E D + L LDV L+ F+
Sbjct: 197 AGSLFLRLGSVVFGVTGVVYYAFLV------FLCE---LDPNCSALSTSLDVCAILFIFI 247
Query: 104 QLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWVSAIVRE 145
Q++FIF + I +AR MH++ ++L W+ ++ E
Sbjct: 248 QMHFIFCNWKLSITGSHMVARVGTMHLVAANLWTWIRYVLME 289
>U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical
protein F45F2.7 protein.
Length = 623
Score = 85.4 bits (202), Expect = 7e-17
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 16/232 (6%)
Query: 226 DCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCTKLTLHTLMLIASL 285
DCH + GLF G+ M A + IG ++ + L+ L L + L+A++
Sbjct: 381 DCHNTTIGLFLGIFFMT--AAFVTIGIYTMLYNKKKTQSADLVIGIVNLILFCVTLLATI 438
Query: 286 VTLNQLRKLDINEHPIS-LLDDVLLFICLPA--FFMETFFSLIA----TISILNIVKTID 338
++R L H ++D++LL I L + F +I T S + +
Sbjct: 439 FGAWRMRVLQYRLHAHGEVIDEILLIIGLVGELIYCSIGFDMIVNGNRTGSHVPNLPIAV 498
Query: 339 FIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLLYTFSYKSPE 398
F IQV IQ I+ R ++ R++PG++ L FL++ N+ +++ +TF E
Sbjct: 499 FTFRIIQVIIQAMYILIASRLRCLSEVNARTQPGKQTLTFLVLINITLFVYHTF-----E 553
Query: 399 SLDERYAFYG--KVLWSILGHVSLPLIMFYRFHSSVCFADIWDSAYKPGSEH 448
+ Y F + + L ++S PL++FYRFHSS C A+IW AY H
Sbjct: 554 GMKSTYGFPALMETKYFELLNISSPLVVFYRFHSSACLAEIWKHAYSTKHHH 605
Score = 40.7 bits (91), Expect = 0.002
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 25 RPPTLIPMLHQYCFSQ----GRHSGSFYLKLGAAGFA-LGHLIHSVLLLAVQIGHFLDED 79
R +L+P ++ S G +G+ YL+LGA F LG ++ + G
Sbjct: 133 RKTSLVPRPDRWLLSDPIHNGEGAGTLYLRLGAIFFGTLGSVLWGCEIFLCFSG------ 186
Query: 80 VNNDDCVNILQVVLDVMFPLYCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWV 139
+CV+ L V + ++ F+Q++FI S + R LA F MH + +L W
Sbjct: 187 ----ECVHRLVVAKHIAAIIFTFLQMHFIVCNSKITFHRSNILASFGMMHCVAVNLWTWF 242
Query: 140 S 140
S
Sbjct: 243 S 243
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 81.0 bits (191), Expect = 2e-15
Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 16/226 (7%)
Query: 226 DCHASNKGLFAGLILMVIIAGMLIIGFVFSSVGEEFLELGYLLNNCTKLTLHTLMLIASL 285
DC + G+F + + +I A + + + S + LL T + L + L+A +
Sbjct: 316 DCSGTTVGIFLAVAVHIISAVAVGMHGILSKSNRD--SAANLLVGYTDVFLFVVALLACI 373
Query: 286 VTLNQLRKLDINEHPIS-LLDDVLLFICLPAFFMETFFSLIATISILNI------VKTID 338
+ Q+RKL H ++D++LL + L + + + I+ I + +
Sbjct: 374 LAFFQMRKLQYRLHAHGEVIDEILLIVGLAGECVYSCAGMDLYINDKMIKEPASYITIVS 433
Query: 339 FIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLLYTFSYKSPE 398
F + +V +QT I+ R T+ ++PG++++ FLL+ N+ +++ +TF E
Sbjct: 434 FTLRITEVLVQTIFILIATRMRCYTQTNCYTEPGKQVITFLLVCNINLFIYHTF-----E 488
Query: 399 SLDERYAFYGKV--LWSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
+ + + F K+ +S + +++ P+++FYRFHSS C A+IW Y
Sbjct: 489 TTELNFGFPIKLPDSYSAMLNIASPIVVFYRFHSSACLAEIWKHTY 534
Score = 44.8 bits (101), Expect = 1e-04
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 41 GRHSGSFYLKLGAAGF-ALGHLIHSVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVMFPL 99
G +G+ YL++GA F ++G ++ +L F D N + +++ +L V+F
Sbjct: 122 GEGAGTMYLRVGALFFGSMGSVLWGTEILLC----FFD---NQRHGIYVVKYILAVIFT- 173
Query: 100 YCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWVS-AIVRETI 147
F+Q++FIF S + + R +A+F MH + +L W+S +++ +I
Sbjct: 174 --FMQMHFIFSNSKISLKRSNIIAKFGLMHSVAVNLWNWLSICLIKSSI 220
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 339 FIVMFIQVTIQTPLIMDGLRRCSNTKKLRRSKPGRELLMFLLIANVGMWLLYTFSYKSPE 398
F+ I+V IQ L+ L++ + + G++ + FL+ N + F + + E
Sbjct: 316 FLTRAIEVLIQAILLFYLLKKGGSVEPC--DTIGKQSITFLIALN-----MILFGFHAIE 368
Query: 399 SLDERYAFYGKV--LWSILGHVSLPLIMFYRFHSSVCFADIWDSAY 442
Y F K+ + + LPL++F+RFH SVCFA+IW Y
Sbjct: 369 GSIRTYGFPTKIDDTSKMFLKICLPLVVFFRFHCSVCFAEIWKVYY 414
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 39 SQGRHSGSFYLKLGAAGFALGHLIH--SVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVM 96
S+ SFY KL GF + + + S++ L + + ++E ++N + + ++V+
Sbjct: 36 SESSFRSSFY-KLFIVGFFMNMMTYFNSLISLRLPQSNGINETLSNFFLTHN-EHNMEVI 93
Query: 97 FPLYCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFW 138
FP+ F L++ F Y+ I + +L RF+ + S FW
Sbjct: 94 FPVKVFHFLHYYFAYAQYIYNFFISLNRFSLITNPIKSELFW 135
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 39 SQGRHSGSFYLKLGAAGFALGHLIH--SVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVM 96
S+ SFY KL GF + + + S++ L + + ++E ++N + + ++V+
Sbjct: 36 SESSFRSSFY-KLFIVGFFMNMMTYFNSLISLRLPQSNGINETLSNFFLTHN-EHNMEVI 93
Query: 97 FPLYCFVQLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFW 138
FP+ F L++ F Y+ I + +L RF+ + S FW
Sbjct: 94 FPVKVFHFLHYYFAYAQYIYNFFISLNRFSLITNPIKSELFW 135
>AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical
protein Y32B12B.7 protein.
Length = 324
Score = 30.7 bits (66), Expect = 2.2
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 255 SSVGEEFLELGYLLNNCTKLTLHTLML-----IASLVTLNQLRKLDINEHPISLLDDVLL 309
SSV L +G+ + T LT+ TL++ + +N RK N+ +L ++
Sbjct: 199 SSVTPSALIIGFFVQPLTVLTVFTLVVLMFKKLRDKKRINSTRK--ANKKAERVLSATMI 256
Query: 310 FICLPAFFMETFFSLIATISILNIVKTIDFIVMFIQVTIQTPLI 353
F+ P + IA +++ TI +IV +I + Q +I
Sbjct: 257 FLLFPVIVNYS----IALFEFFDLINTISYIVHYISLDAQAHVI 296
>U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform b protein.
Length = 603
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 18 EFKAPNFRPPTLIPMLH--QYCFSQGRHSGSFYLKLGAAGFALG 59
+F P+F PP L P H +Y + Q +LK GAAG G
Sbjct: 517 QFPTPHFAPPMLTPHHHMLKYVYLQQHQQAQTFLK-GAAGLHPG 559
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 18 EFKAPNFRPPTLIPMLH--QYCFSQGRHSGSFYLKLGAAGFALG 59
+F P+F PP L P H +Y + Q +LK GAAG G
Sbjct: 517 QFPTPHFAPPMLTPHHHMLKYVYLQQHQQAQTFLK-GAAGLHPG 559
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 29.5 bits (63), Expect = 5.0
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 44 SGSFYLKLGAAGFALGHLIHSVLLLAVQIGHFLDEDVNNDDCVNILQVVLDVMFPLYCFV 103
+GS Y+ +GF L +++ +V+ + + HF E V + V F + C
Sbjct: 346 TGSIYMNAAVSGF-LRYVVGAVVAV---LDHFGGEHVGRKR-----MHFITVSFIMCCMF 396
Query: 104 QLYFIFKYSNVIILRYQNLARFAFMHMIGSSLCFWVSAIV 143
++FI Y N ++L Y++ R + G++ C ++ ++
Sbjct: 397 GIFFI--YFNDLVLEYKSWIRALTLLAFGTTGCLFLQLLL 434
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.328 0.143 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,045,449
Number of Sequences: 27539
Number of extensions: 459434
Number of successful extensions: 1856
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1816
Number of HSP's gapped (non-prelim): 28
length of query: 448
length of database: 12,573,161
effective HSP length: 84
effective length of query: 364
effective length of database: 10,259,885
effective search space: 3734598140
effective search space used: 3734598140
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 61 (28.7 bits)
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