Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001227-TA|BGIBMGA001227-PA|undefined
(212 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0313 - 21947115-21948021,21948102-21948172 32 0.30
12_02_0188 - 15158824-15159215,15159299-15159809,15159885-151600... 31 0.92
10_06_0170 + 11431540-11432259,11434552-11434644,11434739-114348... 30 1.6
02_02_0730 - 13466806-13466865,13466922-13467029,13467897-134679... 30 1.6
03_03_0198 + 15361048-15361746,15361854-15361946,15362035-153621... 29 2.1
06_03_1222 - 28521799-28521900,28521952-28522029,28522292-285243... 29 2.8
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 29 3.7
02_01_0353 + 2545982-2549833 29 3.7
01_05_0611 - 23644692-23646439,23647011-23647551,23648851-236489... 29 3.7
01_05_0453 + 22375253-22375513,22376560-22376655,22376749-223768... 29 3.7
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 28 4.9
04_01_0619 - 8125611-8127967,8128449-8130123 28 4.9
07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509 28 6.5
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 6.5
05_03_0513 + 14919136-14920881 28 6.5
03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805 28 6.5
02_05_1313 - 35658599-35658683,35659231-35659313,35659394-356594... 28 6.5
11_08_0033 + 27820563-27823482,27823593-27823996 27 8.6
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 27 8.6
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 27 8.6
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 27 8.6
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 27 8.6
>02_04_0313 - 21947115-21948021,21948102-21948172
Length = 325
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 121 SSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSV 180
++ GG G T + SP N + R+ I D S P +RS
Sbjct: 176 ANGGGGGGGGAATDQASSPTDQTADQENPGQQQQGEQHELRVQIDRRDQPSSPEPPRRSP 235
Query: 181 ATMDAQSIR---SVETHAPPPTN---PEDNKKQTK 209
AQS R S+ + +PP + PED + T+
Sbjct: 236 DPRSAQSFRRVASMGSRSPPAPSEDAPEDEQTTTQ 270
>12_02_0188 -
15158824-15159215,15159299-15159809,15159885-15160015,
15160107-15160310,15160385-15161066,15161158-15161414,
15161491-15161631,15161731-15162136
Length = 907
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 58 ASLTNLQNADDNPNRKRTMSQPGPVSGSLLTXXXXXXXXXXPQKNVMYAPDLERSESTSD 117
A ++ AD + +++T P + + ++PD + S +S
Sbjct: 686 AEWADVNIADTHIGKRKTRQPPKKPTSKRAKGTGPQSRNVDSDEETEHSPDYQESNDSSS 745
Query: 118 RLRSSNGGDSG------TATPTGERGSPLPYNG 144
R + +G D G T P+G SP+ + G
Sbjct: 746 RTDTDDGDDGGEGGEGTTEVPSGGHHSPIQFTG 778
>10_06_0170 +
11431540-11432259,11434552-11434644,11434739-11434806,
11434873-11435011,11435179-11435229,11435600-11435675,
11436216-11436274
Length = 401
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 11 KKELLDEIVNRNKLGNKKSHSETSLQQYGENDDVFTIDAG 50
K ELL ++N KL + ++ +L +GE D VF ++ G
Sbjct: 250 KTELLHALINGKKLSDLPKINQQTLIIWGEQDRVFPLELG 289
>02_02_0730 -
13466806-13466865,13466922-13467029,13467897-13467910,
13468234-13468389,13468474-13468599,13468660-13468842,
13469103-13469198,13469290-13469338
Length = 263
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 128 GTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMDAQS 187
G +TPT R S P+ +NN S K N+ ++ PT+ K ++ ++ +
Sbjct: 6 GGSTPTSLRRS-CPFADINNASAGDSPKKRNNIGVFTPTSLTKSKLQEDGAKLSALELRR 64
Query: 188 IRSVETHAPPPTNPEDNKK 206
R+ E +A ++ +K
Sbjct: 65 KRARERYASMSPKKKEARK 83
>03_03_0198 +
15361048-15361746,15361854-15361946,15362035-15362102,
15362255-15362393,15362481-15362483
Length = 333
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 11 KKELLDEIVNRNKLGNKKSHSETSLQQYGENDDVFTID 48
K ELL ++N KL + S+ +L +GE D VF ++
Sbjct: 243 KTELLHTLINGRKLSDLPKISQPTLIIWGEQDQVFPME 280
>06_03_1222 -
28521799-28521900,28521952-28522029,28522292-28524335,
28525188-28525303
Length = 779
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/62 (32%), Positives = 25/62 (40%)
Query: 107 PDLERSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPT 166
PD ST + LR N SG + L Y L NN GD+ +N RL +
Sbjct: 300 PDSIGQLSTLEELRLDNNNMSGELPSAVGNCTNLRYLSLRNNKFVGDLSKVNFTRLNLRI 359
Query: 167 ND 168
D
Sbjct: 360 AD 361
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 111 RSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLN 146
R + T + S+ G +G ATP G P P+ G N
Sbjct: 281 RWDETPASMGSATPGGTGAATPAGYTPGPTPFGGDN 316
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 111 RSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLN 146
R + T + S+ G +G ATP G P P+ G N
Sbjct: 305 RWDETPASMGSATPGGTGAATPAGYTPGPTPFGGDN 340
>01_05_0611 -
23644692-23646439,23647011-23647551,23648851-23648952,
23649244-23649441
Length = 862
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 156 SLNSYRLYIPTNDLKGSATPRKRSVATMDAQSIRSVETHAPPPTN 200
S N+Y LY+ +N L G A P K + +M A + P N
Sbjct: 436 SYNAYELYLSSNQL-GGALPEKLELPSMQAMDLSDNYLSGKLPAN 479
>01_05_0453 +
22375253-22375513,22376560-22376655,22376749-22376823,
22376907-22377019,22377530-22377620
Length = 211
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 172 SATPRKRSVATMDAQSIRSVETHAPPPTNPEDNKKQ 207
SA PR V +D R+ +T AP P +P ++++Q
Sbjct: 46 SAPPRPAGVLDLDQGDARASDTVAPSPPSPCESQEQ 81
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 159 SYRLYIPTNDL----KGSATPRKRSVATMDAQSIRSVETHAPPPTNPE 202
++RL +PTN L G+ATPR+R VA ++ + A T E
Sbjct: 2 AHRLLLPTNPLLPPGTGTATPRRRPVAATVRAALATSAEEARAATGAE 49
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 28.3 bits (60), Expect = 4.9
Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 7/190 (3%)
Query: 14 LLDEIVNRNKLGNKKSHSETSLQQYGENDDVFTIDAGQDPGVLNASLTNLQNADDNPNRK 73
L+D++ N GN S + + N ++ GVL L NL N K
Sbjct: 973 LMDKLQVLNLSGNIMSGTIPRQIGHLRNLQTLILNNNNFSGVLPNDLGNLSNLQYLVLSK 1032
Query: 74 RTMSQPGPVS----GSLLTXXXXXXXXXXPQK-NVMYAPDLERSESTSDRLRSSNGGDSG 128
MS P S SL+T ++ ++R + +S+RL G
Sbjct: 1033 NHMSSTIPASLFHMNSLITVDLSQNSLEGALPVDIGQLNHIDRIDLSSNRLFGRIPESFG 1092
Query: 129 TATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMDAQSI 188
T L +N LN + N K +N L + NDL G+ + + + ++
Sbjct: 1093 QFLMTTYLN--LSHNSLNGSFPNSFDKLINLKSLDVSYNDLSGTIPQYLANFTDLSSLNL 1150
Query: 189 RSVETHAPPP 198
H P P
Sbjct: 1151 SFNNLHGPIP 1160
>07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509
Length = 562
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 118 RLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYR 161
R+ + +GG +G A + E G P Y + + + G K+L R
Sbjct: 465 RIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLR 508
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 109 LERSESTSDRLRS-SNGGDSGTATPTGERGSPLPYNGLNN 147
+ERS ++D++ + GG++GT T T E S + +GL +
Sbjct: 2394 IERSSPSADKIAQVAYGGEAGTETTTVEAVSAMNSDGLQD 2433
>05_03_0513 + 14919136-14920881
Length = 581
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 111 RSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKN--GDIKSLNSYRLYIPTND 168
++ES S SS+G S +++ G GS + + N GD S +PT
Sbjct: 299 QTESPSSSTGSSSGSSSSSSSSGGSSGSSCSGCSSSGSDSNDDGDSASSRPDNSELPT-- 356
Query: 169 LKGSATPRKRSVATMDAQSIRSVETHAPPPTNPEDNK 205
+ +A P ++ T+ ++ +P P ED++
Sbjct: 357 -EAAAKPLEQQQVTVCGGVSPLIDEFSPLPKQQEDDE 392
>03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805
Length = 517
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 140 LPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMDAQSIRSVETH 194
LP N N+NS NG ++ L S +L I G AT + V +++ +R + T+
Sbjct: 117 LPLNLHNSNSSNGCMQVLGSNKLMITCG---GGATRLESMVLSLNKACLRRLPTN 168
>02_05_1313 -
35658599-35658683,35659231-35659313,35659394-35659489,
35659615-35659693,35659775-35659852,35659989-35660030,
35660435-35660532,35660628-35660747,35660840-35660926
Length = 255
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 121 SSNGGDSGTATPTGERGSPLPYNGLNNNSKNG-DIKSLNSYR 161
SS+ G S TPT + +P P + N SK + + LN +R
Sbjct: 182 SSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFR 223
>11_08_0033 + 27820563-27823482,27823593-27823996
Length = 1107
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 145 LNNNSKNGDIK----SLNSYR-LYIPTNDLKGSATPRKRSVATMDAQSIRSVETHAPPPT 199
L +NS +G I SL+ R L +P+N L G P +++ ++ SIR PT
Sbjct: 210 LGDNSLSGPIPDSVASLSMLRVLSLPSNQLSGPVPPAIFNMSRLETISIRKNNLTGAIPT 269
Query: 200 NPEDN 204
N N
Sbjct: 270 NESFN 274
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 125 GDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMD 184
G A+P E+GS +G ++ S++GD S S D K S+ P+KR
Sbjct: 123 GKGAAASP--EKGSSAAPSG-DDASRSGDSGSEESSDTRDDDTDHKDSSAPKKRKSGNTS 179
Query: 185 AQSIRSVETHAP 196
A+ S T P
Sbjct: 180 AEGEPSQATLVP 191
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 149 SKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMDAQSIRSVE 192
+K D++S +++P+N L +++P + + A M+AQ+ SV+
Sbjct: 178 AKEIDVRSPCGTEVFVPSNVLDVASSPIELAKAYMEAQTSASVQ 221
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 109 LERSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTND 168
L+RSES SD GG ++ + + S + G+ ++S + +NS L++ ++
Sbjct: 630 LDRSESCSD------GGGVTHSSSSLDHPSDQSFTGVKHHSTPSCSQEVNSGSLHVSSSQ 683
Query: 169 LKGSATPR----KRSVATMDAQSIRSVETHA 195
L+G A R K + +++ VE +A
Sbjct: 684 LQGMAGKRALGKKEEIDSLELWKYGDVERNA 714
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 108 DLERSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTN 167
+ ERS + + +NG +G A GS P G +K G ++ RL P +
Sbjct: 454 EFERSHQRQENISWANGEAAGAALNQSISGSSSPVAGPQGLTKGGAKPPYSALRLLPPPS 513
Query: 168 DLKGSA 173
SA
Sbjct: 514 IAAASA 519
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.303 0.125 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,712,673
Number of Sequences: 37544
Number of extensions: 281772
Number of successful extensions: 544
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 532
Number of HSP's gapped (non-prelim): 23
length of query: 212
length of database: 14,793,348
effective HSP length: 79
effective length of query: 133
effective length of database: 11,827,372
effective search space: 1573040476
effective search space used: 1573040476
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -