Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001227-TA|BGIBMGA001227-PA|undefined
(212 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 34 0.082
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont... 32 0.33
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 31 0.44
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 31 0.58
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 30 1.0
At4g25515.1 68417.m03679 transcriptional co-regulator family pro... 29 2.3
At2g36270.1 68415.m04452 bZIP transcription factor family protei... 29 3.1
At5g09850.1 68418.m01139 transcription elongation factor-related... 28 4.1
At2g40070.1 68415.m04923 expressed protein 28 4.1
At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RS... 27 7.2
At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RS... 27 7.2
At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase (... 27 7.2
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 27 7.2
At3g04630.1 68416.m00495 expressed protein 27 9.5
At1g30570.1 68414.m03740 protein kinase family protein contains ... 27 9.5
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 33.9 bits (74), Expect = 0.082
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 61 TNLQNADDNPNRKRTMSQPGPVSGSLLTXXXXXXXXXX---PQKNVMYAP---DLERSES 114
+ + N N ++ +T+ QP P SG P + + +P D RSE+
Sbjct: 820 SQIANELQNMDKGKTLGQPSPTSGQNRVSEETEKGSGSNQDPDSSKLQSPHILDRGRSEN 879
Query: 115 TSDRLRSSNGGDSGTATP 132
DR R S+GG+ TP
Sbjct: 880 GGDRGRGSSGGNHPNTTP 897
>At4g20940.1 68417.m03034 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 977
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 112 SESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSL-----NSYRLYIPT 166
S T + + N G +G P GS + L++N +GD+ + N L +
Sbjct: 457 SMPTLEEIHLQNNGMTGNIGPLPSSGSRIRLLDLSHNRFDGDLPGVFGSLTNLQVLNLAA 516
Query: 167 NDLKGSATPRKRSVATMDAQSIRSVETHAPPPTNPEDN 204
N+L GS + ++ + + P P+N N
Sbjct: 517 NNLSGSLPSSMNDIVSLSSLDVSQNHFTGPLPSNLSSN 554
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 31.5 bits (68), Expect = 0.44
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 99 PQKNVMYAPDLERSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLN 158
PQ+ V P R + TS ++ + G T RG P K + +
Sbjct: 236 PQQPVKRPPGRPRKDGTSPTVKPAASVSGGVET-VKRRGRPPSGRAAGRERKPIVVSAPA 294
Query: 159 SYRLYIPTNDLKGSATPRKRSVATMDAQSIRSVETHAPPPTNPEDNKKQ 207
S Y+ ++ P++ +DA SV PPPTN E ++
Sbjct: 295 SVFPYVANGGVRRRGRPKR-----VDAGGASSVAPPPPPPTNVESGGEE 338
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein
2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2
GI:12597460
Length = 1691
Score = 31.1 bits (67), Expect = 0.58
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 63 LQNADDNPNRKRTMSQPGPVSGSLLTXXXXXXXXXXPQKNVMYAPDLERS-ESTSDRLRS 121
LQ++ NPN T S ++GS M +L + +S
Sbjct: 141 LQHSGGNPNLMITSSGDATMAGSNNITTSAMNTGNLLNSGGMLGGNLSNGYQHSSSNFGL 200
Query: 122 SNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSAT 174
+GG+ + + G +P G N+S N + + SY +N+ G +T
Sbjct: 201 GSGGNMSSMSSQRNTGQMMPTPGFVNSSTNNNSNNGQSYLSVEASNNSGGFST 253
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 11 KKELLDEIVNRNKLGNKKSHSETSLQQYGENDDVFTIDAGQDPGVL-NASLTNLQNADDN 69
++E+ D+I R K K + + GE+D + G++ G N S T +Q D
Sbjct: 1428 EEEMQDKIDRRGKNQEIKGQEPYGVLRNGEHDKITEYHRGEEKGTAENVSSTKIQQTKDE 1487
Query: 70 PNRKRTMSQ 78
+ R S+
Sbjct: 1488 LEKPRKPSE 1496
>At4g25515.1 68417.m03679 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 471
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 123 NGGDSGTATPTGERGSPLPYNGLNN-NSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVA 181
NG TA T + + N +NN NS G+ + +S + +N S++ ++ ++A
Sbjct: 275 NGSPQATAALTNYQSMLIRQNAMNNQNSNTGNQEGFSSQNPTLNSNQSPSSSSQQRENLA 334
Query: 182 T 182
T
Sbjct: 335 T 335
>At2g36270.1 68415.m04452 bZIP transcription factor family protein /
ABA-responsive element-binding protein, putative similar
to ABA-responsive element binding protein 1 (AREB1)
GI:9967417 from [Arabidopsis thaliana]; contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 442
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 122 SNGGDSGTATPTGERGSPLPYNGLNNNSKNG 152
+N A G P +NG NNN+ NG
Sbjct: 80 NNNNQQQAAAAAGSHSVPANHNGFNNNNNNG 110
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 138 SPLPYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRSVATMDAQSIRSVETHAPP 197
SP+P NG +++SKN +I + + S +P K S + Q+I + H
Sbjct: 239 SPVPQNGYSSSSKNSNITEPERKPRPVAPQPRRESPSPAKPSRPSPSQQTIPRDKEHKEV 298
Query: 198 PTNPEDNKKQTKY 210
+ + Q Y
Sbjct: 299 DFDTARKRLQQNY 311
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 106 APDLERSESTSDRLRSSNGGDSGTATPTGERGSPLPYN 143
+P L S S R SS G S ATPTG R S L N
Sbjct: 163 SPGLSSSSGASRRPSSSGGPGSRPATPTG-RSSTLTAN 199
>At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 357
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 99 PQKNVMYAPDLERSESTSDRLRSSNGGDSGTATP---TGERGSPLPY 142
P K +PD +R + +R+ S G +P GE SP PY
Sbjct: 232 PYKRARLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPY 278
>At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 356
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 99 PQKNVMYAPDLERSESTSDRLRSSNGGDSGTATP---TGERGSPLPY 142
P K +PD +R + +R+ S G +P GE SP PY
Sbjct: 232 PYKRARLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPY 278
>At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase
(CKI1) identical to GB:D87545
Length = 1122
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 177 KRSVATMDAQS---IRSVETHAPPPTNPEDNKKQTK 209
KR +A+ D++S ++SV T P NPED ++ +K
Sbjct: 941 KRIMASTDSESETRVKSVRTGRKPIGNPEDEQETSK 976
>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 141 PYNGLNNNSKNGDIKSLNSYRLYIPTNDLKGSATPRKRS 179
P+NG ++ D+ NS IP N L+ +A PR S
Sbjct: 215 PFNGSSHTHITTDLNINNSNAYEIPKNILQTAAIPRNAS 253
>At3g04630.1 68416.m00495 expressed protein
Length = 287
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 108 DLERSESTSDRLRSSNGGDSGTATPTGERGSPLPYNGLNNNSKNGDIKSLNSYRLYIPTN 167
+ E E T ++ S N + G+A G + SP NG SK D L + P N
Sbjct: 35 EFEVKECTEEKSLSENAPNVGSAERVGAQKSPKTRNGNAKVSKQQDAPLLAVRKPLQPEN 94
Query: 168 DLKGSATPRKRSVATMDAQSIR 189
K S+A+ A S+R
Sbjct: 95 K-KHIDDEDNCSIASSVATSMR 115
>At1g30570.1 68414.m03740 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 849
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 KKELLDEIVNRNKLGNKKSHSETSLQQYGENDDVFTIDAGQDPGVLNASLTNLQ 64
K+ L+ I++ N GN +S SL++YGE + D G++ ++ L +L+
Sbjct: 741 KQRNLESIIDSNLRGN---YSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.303 0.125 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,394,412
Number of Sequences: 28952
Number of extensions: 229855
Number of successful extensions: 458
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 18
length of query: 212
length of database: 12,070,560
effective HSP length: 78
effective length of query: 134
effective length of database: 9,812,304
effective search space: 1314848736
effective search space used: 1314848736
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
S2: 57 (27.1 bits)
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