Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001225-TA|BGIBMGA001225-PA|undefined
(94 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0171 - 13062794-13064017 32 0.056
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 31 0.17
11_06_0185 + 21018045-21022307 30 0.30
04_04_1369 - 32982354-32983024,32983386-32983959 29 0.39
11_06_0289 - 21969248-21973516 29 0.69
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 28 1.2
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 27 1.6
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 27 2.1
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 27 2.1
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 27 2.8
03_05_0021 + 19883445-19883523,19884031-19884449,19884489-19884725 27 2.8
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 27 2.8
11_06_0385 + 22998153-22998329,22999642-22999823,23004817-230051... 26 3.7
10_08_0245 + 16138402-16138548,16138648-16138701,16139106-161391... 26 3.7
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 26 3.7
05_02_0105 + 6644264-6644344,6645573-6646097,6646185-6646410,664... 26 3.7
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 26 3.7
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 26 3.7
03_01_0291 - 2250349-2250966,2251062-2251444,2251604-2251981,225... 26 3.7
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968... 26 4.8
04_04_0994 + 29980076-29980441,29980900-29980998,29981075-299816... 26 4.8
01_06_1753 - 39664219-39665445 26 4.8
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 25 6.4
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 25 6.4
>09_03_0171 - 13062794-13064017
Length = 407
Score = 32.3 bits (70), Expect = 0.056
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 28 LIDRGMDSDTDVEYCPSDDEETEIN 52
+ID +TD EYCP DDEE E++
Sbjct: 34 IIDTDDKGNTDDEYCPIDDEEEELD 58
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 17 KEPMLSNRKCLLIDRGMDSDTDV---EYCPSDDEETEINIHQELLKKPIREQI 66
K + + + G DSD+D + CPSDD+E IH+ K ++E++
Sbjct: 520 KSTLADDESASEVSSGSDSDSDCILGDDCPSDDDEEAAQIHKRF--KELKEKL 570
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 29.9 bits (64), Expect = 0.30
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKA 87
D D + E DDEE I++H++ ++ +RE T N +E +K + ++A
Sbjct: 525 DDDEEEEEEDDDDEEEPIHLHEDQYEQILREVFTKNAS--SKAQEQDKLVAEQA 576
>04_04_1369 - 32982354-32983024,32983386-32983959
Length = 414
Score = 29.5 bits (63), Expect = 0.39
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 27 LLIDRGMDSDTDVEY-CPSDDEETEINIHQ-ELLKK---PIREQITWNTHYL---QPERE 78
+ + G++S +VE CP ETEI +H+ EL K I +I Y+ Q E E
Sbjct: 148 IAVKDGLNSGQEVESNCPMQRRETEIAVHEIELTKSHFDHIESKIYLGQRYVGSNQKENE 207
Query: 79 DEKTLIKKAD 88
+ + L ++ D
Sbjct: 208 ESRLLTRQKD 217
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 28.7 bits (61), Expect = 0.69
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKA 87
D + + E DDEE I++H++ ++ +RE T N +E +K + ++A
Sbjct: 527 DDEEEEEEDDDDDEEEPIHLHEDQYEQILREVFTKNAS--SKAQEQDKLVAEQA 578
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 59 KKPIREQITWNTHYLQPEREDEKTLIKKADDL 90
K +E+I + H LQ E EDE+ L + ++DL
Sbjct: 308 KNKDKEKIAADIHSLQDELEDERRLRRHSEDL 339
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 31 RGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
RG + T Y SDD E E+ +E+ K REQI
Sbjct: 934 RGTTTKTAKSYFDSDDSEDELAQRKEVQTKWSREQI 969
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 4 NEKIKGILP----RRSIKEPMLSNRKCLLIDRGMDSDTDVEYCP 43
N+K GI+P +R + + + L++ + +DS +D+ YCP
Sbjct: 205 NDKCGGIIPPSLLKRLLGDTDFERWERLILQKTLDSMSDLAYCP 248
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 30 DRGMDSDTDVEYCPSDDEETEINIHQELLKKPIR 63
D + + + CP+DD +TE++I +++L+ I+
Sbjct: 433 DDSYELEQETSNCPADDFKTEMDISRKVLENLIK 466
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 26.6 bits (56), Expect = 2.8
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 7 IKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
+KGIL RS E + L+D GMD D VE S D E+ ++ K+ Q
Sbjct: 47 LKGILTDRSEAEIYAT-----LLDCGMDPDVAVERLISQDPFHEVRRKRDKKKEIKAPQE 101
Query: 67 TWNTHYLQPEREDEKT 82
T + +P KT
Sbjct: 102 TRPRPFYKPAFRGSKT 117
>03_05_0021 + 19883445-19883523,19884031-19884449,19884489-19884725
Length = 244
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 66 ITWNTHYLQPEREDEKTLIKKADDL 90
++W HY++P ED L+ +DL
Sbjct: 125 LSWKEHYVEPRPEDLVKLMSDLEDL 149
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
D D D+ DD+ + IHQ+L I Q+ N+H P+ + +
Sbjct: 72 DEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLN-NSHTAAPQAKQQ 117
>11_06_0385 +
22998153-22998329,22999642-22999823,23004817-23005189,
23005391-23005627,23006380-23006616
Length = 401
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 37 TDVEYCPSDDEETEINIHQELLKKPI-REQITWNTHY-LQPEREDEKTLIKKADDLTE 92
+ V+ ++ E I I ++LLKKP+ R I H + E +E+ L + A L+E
Sbjct: 332 SSVDIATEENMEALIGIGKDLLKKPVARVNIDTGVHEPVDGEGTNEEALARFAKKLSE 389
>10_08_0245 +
16138402-16138548,16138648-16138701,16139106-16139171,
16139427-16139483,16140490-16140610,16140704-16140744,
16140835-16140886,16141555-16141623,16141697-16141768,
16141890-16142045,16143067-16143284,16143359-16143398,
16143484-16143602,16143726-16143827,16144256-16144300,
16144890-16145030,16145172-16145267,16145415-16145516,
16145611-16145709
Length = 598
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 20 MLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQ 65
M +R+ ++D +SD D + P ++ET + H +K P+ ++
Sbjct: 325 MDQSRQSTMLDE--ESDEDEDQIPESEQETSTHGHDAPVKLPVLDE 368
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 11 LPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPI 62
+ R + ++P++ + + +L D D DTD E S+D+ E H E KK +
Sbjct: 522 MARLAAEDPLVRD-EAILDDDDDDVDTDEEESESEDDSGE-EFHAEPSKKAV 571
>05_02_0105 +
6644264-6644344,6645573-6646097,6646185-6646410,
6646498-6646875,6647035-6647417,6647513-6648130
Length = 736
Score = 26.2 bits (55), Expect = 3.7
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 15 SIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQ 74
SIKE L L D G DSDT Y P+ D T ++ +K P ++ + T +
Sbjct: 580 SIKE--LEEYTFPLQDGGNDSDTIPRYSPTTD-ATSSGQKRKFVKSPTKKIVKHKTSRHK 636
Query: 75 PEREDE 80
E EDE
Sbjct: 637 AE-EDE 641
>04_01_0097 - 998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 26.2 bits (55), Expect = 3.7
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 15 SIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQ 74
SIKE L L D G DSDT Y P+ D T ++ +K P ++ + T +
Sbjct: 1000 SIKE--LEEYTFPLQDGGNDSDTIPRYSPTTD-ATSSGQKRKFVKSPTKKIVKHKTSRHK 1056
Query: 75 PEREDE 80
E EDE
Sbjct: 1057 AE-EDE 1061
>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 1 MEENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEI 51
+EE K K + + P CL D ++ D D +C ++ T +
Sbjct: 990 IEEEAKKKHLAEQHRRTSPGSDGSACLRTDVNLNGDQDKHHCAQNNSHTHL 1040
>03_01_0291 -
2250349-2250966,2251062-2251444,2251604-2251981,
2252147-2252294,2252382-2252906,2253990-2254112,
2254151-2254205,2254510-2254640
Length = 786
Score = 26.2 bits (55), Expect = 3.7
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 15 SIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQ 74
SIKE L L D G DSDT Y P+ D T ++ +K P ++ + T +
Sbjct: 630 SIKE--LEEYTFPLQDGGNDSDTIPRYSPTTD-ATSSGQKRKFVKSPTKKIVKHKTSRHK 686
Query: 75 PEREDE 80
E EDE
Sbjct: 687 AE-EDE 691
>04_04_0998 -
29996117-29996242,29996345-29996486,29996613-29996812,
29997112-29997497,29997769-29998318,29998949-29999296
Length = 583
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 4 NEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCP 43
N I + +R + E L +++ +DS +DV YCP
Sbjct: 341 NASIPPYVLKRLLTEDEFERWDRLTLEKALDSMSDVVYCP 380
>04_04_0994 +
29980076-29980441,29980900-29980998,29981075-29981612,
29982211-29982494,29983014-29983034,29983238-29983452,
29983538-29983691,29984089-29984220
Length = 602
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 13 RRSIKEPMLSNRKCLLIDRGMDSDTDVEYCP 43
+R + E + LL+ R +DS +DV YCP
Sbjct: 385 KRLLGEEEFERWEGLLLRRTLDSMSDVVYCP 415
>01_06_1753 - 39664219-39665445
Length = 408
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 30 DRGMDSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
D D D D +CP + + + HQ + ++ HY ER +E
Sbjct: 316 DDESDDDDDDGHCPPSRQGSVHSYHQAAYQHEEKQHAGGRNHYHAYERHEE 366
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/56 (26%), Positives = 21/56 (37%)
Query: 32 GMDSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKA 87
G D D + C E H+E +K LQ E E+EK ++A
Sbjct: 153 GGGGDFDFDKCREAAREALRTSHEEFFRKERAASAAAAEEQLQKEEEEEKAAAQEA 208
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 26 CLLIDRGMDSDTDV--EYCPSDDEETEINIHQELLK 59
C ++ MD D + E C ++EE + HQ LLK
Sbjct: 826 CFDLNMSMDDDDEAAEERCTGEEEEAGHHHHQLLLK 861
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.133 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,902,814
Number of Sequences: 37544
Number of extensions: 117990
Number of successful extensions: 241
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 24
length of query: 94
length of database: 14,793,348
effective HSP length: 70
effective length of query: 24
effective length of database: 12,165,268
effective search space: 291966432
effective search space used: 291966432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
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