Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001225-TA|BGIBMGA001225-PA|undefined
(94 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 31 0.44
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 31 0.44
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 31 0.44
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 31 0.44
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 31 0.44
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 31 0.44
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 31 0.44
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 31 0.44
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 31 0.44
BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain c... 29 3.1
AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase do... 29 3.1
AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens ... 29 3.1
BC125133-1|AAI25134.1| 137|Homo sapiens KIAA1641 protein. 28 4.1
BC125132-1|AAI25133.1| 137|Homo sapiens KIAA1641 protein. 28 4.1
AK024934-1|BAB15039.1| 137|Homo sapiens protein ( Homo sapiens ... 28 4.1
BC068482-1|AAH68482.1| 1002|Homo sapiens calmin (calponin-like, ... 28 5.4
BC032699-1|AAH32699.1| 678|Homo sapiens Unknown (protein for IM... 28 5.4
BC030652-1|AAH30652.1| 929|Homo sapiens testis expressed 10 pro... 28 5.4
BC025251-1|AAH25251.1| 687|Homo sapiens CLMN protein protein. 28 5.4
AY598337-1|AAT06748.1| 929|Homo sapiens L18 protein. 28 5.4
AL445214-2|CAI39743.1| 929|Homo sapiens testis expressed sequen... 28 5.4
AL445214-1|CAI39742.1| 171|Homo sapiens testis expressed sequen... 28 5.4
AL353805-2|CAI12538.1| 929|Homo sapiens testis expressed sequen... 28 5.4
AL353805-1|CAI12537.1| 171|Homo sapiens testis expressed sequen... 28 5.4
AL117526-1|CAB55978.1| 854|Homo sapiens hypothetical protein pr... 28 5.4
AK025226-1|BAB15087.1| 868|Homo sapiens protein ( Homo sapiens ... 28 5.4
AK022445-1|BAB14036.1| 543|Homo sapiens protein ( Homo sapiens ... 28 5.4
AK000294-1|BAA91062.1| 929|Homo sapiens protein ( Homo sapiens ... 28 5.4
AB060968-1|BAB87845.1| 929|Homo sapiens nbla10363 protein. 28 5.4
AB047979-1|BAB59010.1| 1002|Homo sapiens calmin protein. 28 5.4
AB033014-1|BAA86502.1| 339|Homo sapiens KIAA1188 protein protein. 28 5.4
AY154460-1|AAO18156.1| 1200|Homo sapiens NALP5 protein. 27 7.2
AY054986-1|AAL15549.1| 1200|Homo sapiens maternal-antigen-that-e... 27 7.2
AK022279-1|BAB13999.1| 628|Homo sapiens .117). protein. 27 7.2
AF124187-1|AAD44136.1| 126|Homo sapiens lambda 1 immunoglobin l... 27 7.2
AF115360-1|AAD29302.1| 126|Homo sapiens lambda 6 immunoglobulin... 27 7.2
BC036012-1|AAH36012.1| 964|Homo sapiens tripartite motif-contai... 27 9.5
BC016330-1|AAH16330.1| 352|Homo sapiens RAD51AP1 protein protein. 27 9.5
BC006992-1|AAH06992.1| 335|Homo sapiens RAD51 associated protei... 27 9.5
AK096930-1|BAC04902.1| 352|Homo sapiens protein ( Homo sapiens ... 27 9.5
AF213365-1|AAL36460.1| 964|Homo sapiens POB1 protein. 27 9.5
AF006259-1|AAC39554.1| 335|Homo sapiens Rad51-interacting prote... 27 9.5
AB020705-1|BAA74921.1| 979|Homo sapiens KIAA0898 protein protein. 27 9.5
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 364 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 411
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEYCPSDDEET 49
E + +G ++ E +S R I R +D D DV+ C DD +T
Sbjct: 789 ENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQT 836
>BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain
containing CTD phosphatase 1 protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKAD 88
D+D V +DE E+ +E L K R + L P RE +K L+ D
Sbjct: 91 DNDDVVNDFDIEDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVD 145
>AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase
domain-containing protein protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKAD 88
D+D V +DE E+ +E L K R + L P RE +K L+ D
Sbjct: 91 DNDDVVNDFDIEDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVD 145
>AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ25267 fis, clone STM05473. ).
Length = 318
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKAD 88
D+D V +DE E+ +E L K R + L P RE +K L+ D
Sbjct: 91 DNDDVVNDFDIEDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVD 145
>BC125133-1|AAI25134.1| 137|Homo sapiens KIAA1641 protein.
Length = 137
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 5 EKIKGILPRRSIKEPML--SNRKCLLIDRGM-DSDTDVEYCPSDDEETEINIHQELLKKP 61
+K +L + S + +L S+R C ++ GM DS ++ S +E Q+ L
Sbjct: 32 QKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEI-----QDQLTAT 86
Query: 62 IR--EQITWNTHYLQPEREDEKTLIKKADDLTERV 94
IR +++ +T L+ E + +IKK DD ER+
Sbjct: 87 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERL 121
>BC125132-1|AAI25133.1| 137|Homo sapiens KIAA1641 protein.
Length = 137
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 5 EKIKGILPRRSIKEPML--SNRKCLLIDRGM-DSDTDVEYCPSDDEETEINIHQELLKKP 61
+K +L + S + +L S+R C ++ GM DS ++ S +E Q+ L
Sbjct: 32 QKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEI-----QDQLTAT 86
Query: 62 IR--EQITWNTHYLQPEREDEKTLIKKADDLTERV 94
IR +++ +T L+ E + +IKK DD ER+
Sbjct: 87 IRCTKEMEGDTQKLEVEHVMMRKIIKKQDDQIERL 121
>AK024934-1|BAB15039.1| 137|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21281 fis, clone COL01904. ).
Length = 137
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 5 EKIKGILPRRSIKEPML--SNRKCLLIDRGM-DSDTDVEYCPSDDEETEINIHQELLKKP 61
+K +L + S + +L S+R C ++ GM DS ++ S +E Q+ L
Sbjct: 32 QKRDDVLNKGSATKALLDASSRHCTYLENGMQDSRKKLDQMRSQFQEI-----QDQLTAT 86
Query: 62 IR--EQITWNTHYLQPEREDEKTLIKKADDLTERV 94
IR +++ +T L+ E + +IKK DD ER+
Sbjct: 87 IRCTKEMDGDTQKLEVEHVMMRKIIKKQDDQIERL 121
>BC068482-1|AAH68482.1| 1002|Homo sapiens calmin (calponin-like,
transmembrane) protein.
Length = 1002
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 634 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 677
>BC032699-1|AAH32699.1| 678|Homo sapiens Unknown (protein for
IMAGE:5396766) protein.
Length = 678
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 445 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 488
>BC030652-1|AAH30652.1| 929|Homo sapiens testis expressed 10
protein.
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>BC025251-1|AAH25251.1| 687|Homo sapiens CLMN protein protein.
Length = 687
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 319 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 362
>AY598337-1|AAT06748.1| 929|Homo sapiens L18 protein.
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>AL445214-2|CAI39743.1| 929|Homo sapiens testis expressed sequence
10 protein.
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>AL445214-1|CAI39742.1| 171|Homo sapiens testis expressed sequence
10 protein.
Length = 171
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 130 VSWRLMQIQPNREDTETLIK 149
>AL353805-2|CAI12538.1| 929|Homo sapiens testis expressed sequence
10 protein.
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>AL353805-1|CAI12537.1| 171|Homo sapiens testis expressed sequence
10 protein.
Length = 171
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 130 VSWRLMQIQPNREDTETLIK 149
>AL117526-1|CAB55978.1| 854|Homo sapiens hypothetical protein
protein.
Length = 854
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 623 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 666
>AK025226-1|BAB15087.1| 868|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21573 fis, clone COL06666. ).
Length = 868
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 634 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 677
>AK022445-1|BAB14036.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ12383 fis, clone MAMMA1002598. ).
Length = 543
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 175 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 218
>AK000294-1|BAA91062.1| 929|Homo sapiens protein ( Homo sapiens
cDNA FLJ20287 fis, clone HEP04390. ).
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>AB060968-1|BAB87845.1| 929|Homo sapiens nbla10363 protein.
Length = 929
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 66 ITWNTHYLQPEREDEKTLIK 85
++W +QP RED +TLIK
Sbjct: 485 VSWRLMQIQPNREDTETLIK 504
>AB047979-1|BAB59010.1| 1002|Homo sapiens calmin protein.
Length = 1002
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 634 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 677
>AB033014-1|BAA86502.1| 339|Homo sapiens KIAA1188 protein protein.
Length = 339
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 111 DSGEEAEGCPSAPEETPVDKKPEVHEKAKRK--STRPHY-EEEGEDD 154
>AY154460-1|AAO18156.1| 1200|Homo sapiens NALP5 protein.
Length = 1200
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 10 ILPRRSIKEPMLSNRKCLLI--DRGMD-SDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
ILP+ + LS++ C+ + D+ + S +++C + ++ E +ELLKK E
Sbjct: 33 ILPKNPLFPQNLSSQPCIKMEGDKSLTFSSYGLQWCLYELDKEEFQTFKELLKKKSSEST 92
Query: 67 TWNTHYLQPEREDEKTL 83
T + + E + + L
Sbjct: 93 TCSIPQFEIENANVECL 109
>AY054986-1|AAL15549.1| 1200|Homo sapiens
maternal-antigen-that-embryos-require protein protein.
Length = 1200
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 10 ILPRRSIKEPMLSNRKCLLI--DRGMD-SDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
ILP+ + LS++ C+ + D+ + S +++C + ++ E +ELLKK E
Sbjct: 33 ILPKNPLFPQNLSSQPCIKMEGDKSLTFSSYGLQWCLYELDKEEFQTFKELLKKKSSEST 92
Query: 67 TWNTHYLQPEREDEKTL 83
T + + E + + L
Sbjct: 93 TCSIPQFEIENANVECL 109
>AK022279-1|BAB13999.1| 628|Homo sapiens .117). protein.
Length = 628
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 34 DSDTDVEYCPSDDEETEINIHQELLKKPIREQITWNTHYLQPEREDE 80
DS + E CPS EET ++ E+ +K R+ + HY + E ED+
Sbjct: 400 DSGEEAEGCPSAPEETPVDKKPEVHEKVKRK--STRPHY-EEEGEDD 443
>AF124187-1|AAD44136.1| 126|Homo sapiens lambda 1 immunoglobin
light chain variable region protein.
Length = 126
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEY-CPSDDEETEI 51
E+NE+ G+ R S SN L I G++S+ + +Y C S D+ +++
Sbjct: 51 EDNERPSGVPDRFSGSIDTSSNSASLTIS-GLESEDEADYFCQSYDDNSQV 100
>AF115360-1|AAD29302.1| 126|Homo sapiens lambda 6 immunoglobulin
light chain variable region protein.
Length = 126
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 2 EENEKIKGILPRRSIKEPMLSNRKCLLIDRGMDSDTDVEY-CPSDDEETEI 51
E+NE+ G+ R S SN L I G++S+ + +Y C S D+ +++
Sbjct: 51 EDNERPSGVPDRFSGSIDTSSNSASLTIS-GLESEDEADYFCQSYDDNSQV 100
>BC036012-1|AAH36012.1| 964|Homo sapiens tripartite
motif-containing 37 protein.
Length = 964
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 18 EPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETE 50
+P+L + GM SD+D+E C +++EE E
Sbjct: 885 QPVLPEGASAAPEEGMSSDSDIE-CDTENEEQE 916
>BC016330-1|AAH16330.1| 352|Homo sapiens RAD51AP1 protein protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/35 (22%), Positives = 23/35 (65%)
Query: 32 GMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
G DS+ D ++C S+D + + ++ + +K+ ++++
Sbjct: 203 GEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEV 237
>BC006992-1|AAH06992.1| 335|Homo sapiens RAD51 associated protein 1
protein.
Length = 335
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/35 (22%), Positives = 23/35 (65%)
Query: 32 GMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
G DS+ D ++C S+D + + ++ + +K+ ++++
Sbjct: 186 GEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEV 220
>AK096930-1|BAC04902.1| 352|Homo sapiens protein ( Homo sapiens
cDNA FLJ39611 fis, clone SKNSH2008940, highly similar to
Homo sapiens Rad51-interacting protein mRNA. ).
Length = 352
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/35 (22%), Positives = 23/35 (65%)
Query: 32 GMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
G DS+ D ++C S+D + + ++ + +K+ ++++
Sbjct: 203 GEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEV 237
>AF213365-1|AAL36460.1| 964|Homo sapiens POB1 protein.
Length = 964
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 18 EPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETE 50
+P+L + GM SD+D+E C +++EE E
Sbjct: 885 QPVLPEGASAAPEEGMSSDSDIE-CDTENEEQE 916
>AF006259-1|AAC39554.1| 335|Homo sapiens Rad51-interacting protein
protein.
Length = 335
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/35 (22%), Positives = 23/35 (65%)
Query: 32 GMDSDTDVEYCPSDDEETEINIHQELLKKPIREQI 66
G DS+ D ++C S+D + + ++ + +K+ ++++
Sbjct: 186 GEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEV 220
>AB020705-1|BAA74921.1| 979|Homo sapiens KIAA0898 protein protein.
Length = 979
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 18 EPMLSNRKCLLIDRGMDSDTDVEYCPSDDEETE 50
+P+L + GM SD+D+E C +++EE E
Sbjct: 900 QPVLPEGASAAPEEGMSSDSDIE-CDTENEEQE 931
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.133 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,506,660
Number of Sequences: 224733
Number of extensions: 587965
Number of successful extensions: 1397
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1373
Number of HSP's gapped (non-prelim): 43
length of query: 94
length of database: 73,234,838
effective HSP length: 71
effective length of query: 23
effective length of database: 57,278,795
effective search space: 1317412285
effective search space used: 1317412285
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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