Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001223-TA|BGIBMGA001223-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR011545|DEAD/DEAH box helicase, N-terminal
(465 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 617 e-177
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 255 6e-68
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 4e-57
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 203 3e-52
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 203 3e-52
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 8e-40
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 139 4e-33
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 1e-30
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 112 5e-25
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 108 8e-24
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 96 6e-20
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 95 8e-20
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 81 2e-15
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 3e-15
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 80 4e-15
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 4e-15
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-13
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 75 2e-13
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 66 4e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 65 1e-10
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 62 7e-10
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 62 7e-10
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 59 6e-09
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 57 3e-08
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 4e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 4e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 52 1e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 2e-05
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 47 4e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 4e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 44 2e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 44 2e-04
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 42 0.001
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 41 0.002
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 39 0.007
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 39 0.010
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.010
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 38 0.013
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 38 0.017
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 37 0.040
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.069
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 36 0.092
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 35 0.16
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.28
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 33 0.49
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 33 0.49
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 33 0.49
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 32 0.85
SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086) 31 1.5
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_24445| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 29 6.0
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 29 8.0
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 617 bits (1523), Expect = e-177
Identities = 291/430 (67%), Positives = 347/430 (80%), Gaps = 1/430 (0%)
Query: 35 DVPDTPNA-ADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGV 93
D DT N A++SLL K++R LV +K ++E+ R DP+SPLYS K+FE L L NL +GV
Sbjct: 59 DEKDTKNELAESSLLTKLLRDKLVVTKHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGV 118
Query: 94 YAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLC 153
Y MGFN PSKIQETALP LLADPP NMIAQSQSGTGKTAAFVL MLSRVD+ K YPQV+C
Sbjct: 119 YDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVIC 178
Query: 154 LSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVK 213
LSPTYELA QTG+VA M K CP IK+ YAVRG + PRG K TDHI+IGTPG + DW K
Sbjct: 179 LSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTDHIIIGTPGTLLDWIRK 238
Query: 214 FGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEI 273
F+ K+ VFVLDEAD+MI QGHQDQ IRIHK L CQ++ FSATY VM+FAE
Sbjct: 239 SKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATYDEDVMKFAET 298
Query: 274 IVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTAS 333
+V NPIIIRL REEESLDNIKQYYV CK++EDK+ A+CN+YGV++IGQ ++FCHTR+ A+
Sbjct: 299 VVPNPIIIRLRREEESLDNIKQYYVVCKNSEDKFEALCNMYGVLSIGQCVVFCHTRRNAA 358
Query: 334 WLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVN 393
WL+EKM K+GH+VA+LSGE+T+EQRIAVL+RFR+G EK+LITTNV +RGIDVEQVTLV+N
Sbjct: 359 WLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVIN 418
Query: 394 FDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAHFGKKIQLLD 453
+DMPMDM KAD ETYLHRIGRTGRFGK+GIA+N ID ++M I IE HFGKKIQ L
Sbjct: 419 YDMPMDMQGKADFETYLHRIGRTGRFGKSGIAVNFIDGQRSMNIMKKIEEHFGKKIQHLQ 478
Query: 454 IEDAEEIEKI 463
+D +E+E +
Sbjct: 479 ADDVDELENL 488
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 255 bits (624), Expect = 6e-68
Identities = 138/367 (37%), Positives = 227/367 (61%), Gaps = 15/367 (4%)
Query: 97 GFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSP 156
GF PS IQ+ A+ +L +++IAQ+QSGTGKTA F +++L +D+ PQ L LSP
Sbjct: 16 GFEKPSAIQQRAIKPILKG--RDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSP 73
Query: 157 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMFDWGVK 213
T ELA Q +V + + ++ + G + + D HI+ GTPG++FD ++
Sbjct: 74 TRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDM-IR 131
Query: 214 FGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEI 273
IK+ VLDEAD M+N+ G ++Q +++ LP Q++ SAT +++
Sbjct: 132 RRNLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSK 190
Query: 274 IVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTAS 333
+++PI I + R+E +L+ IKQ++V + E K+ +C++Y +TI QA+IFC+T++
Sbjct: 191 FMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVD 250
Query: 334 WLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVN 393
WL+EKM + +VA + G++ ++R A++ FR G +VLI+T+V +RG+DV+QV+LV+N
Sbjct: 251 WLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVIN 310
Query: 394 FDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAHFGKKIQLLD 453
+D+P NR E Y+HRIGR+GRFG+ G+AIN + S + I DIE ++ +I +
Sbjct: 311 YDLP--NNR----ELYIHRIGRSGRFGRKGVAINFVKSDD-IRILRDIEQYYSTQIDEMP 363
Query: 454 IEDAEEI 460
+ A+ I
Sbjct: 364 MNVADLI 370
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 219 bits (535), Expect = 4e-57
Identities = 133/365 (36%), Positives = 218/365 (59%), Gaps = 38/365 (10%)
Query: 77 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL-PTLLADPP------------------ 117
V++F+ ++LK LL+G+YA GF PS IQ+ A+ P P
Sbjct: 62 VESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLS 121
Query: 118 -QNMIAQSQSGTGKTAAFVLAMLSRVDSN---KN---YPQVLCLSPTYELAIQTGEVAAK 170
+++IAQ+QSGTGKTA F +++L +D+N KN Q L L+PT ELA Q +V
Sbjct: 122 ARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLA 181
Query: 171 MAKFCPEIKLKYAVRGEELPRGS-KITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVL 227
+ + +K + G + K+ + H+++GTPG++FD + G+ + IK+FVL
Sbjct: 182 LGDYM-HVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDM-INRGVLNTRDIKLFVL 239
Query: 228 DEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREE 287
DEAD M++R G +DQ + LP++ Q++ SAT T V++ + + + I + REE
Sbjct: 240 DEADEMLSR-GFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREE 298
Query: 288 ESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVA 347
+L+ IKQ++V + + K +C++Y +TI QA+IF +TR+ WL+ KM++ H+V+
Sbjct: 299 VTLEGIKQFFVLVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVS 358
Query: 348 VLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCE 407
+ G+++ ++R ++ FR G +VLITT++L+RGIDV QV+LV+N+D+P NR E
Sbjct: 359 SMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLP--SNR----E 412
Query: 408 TYLHR 412
Y+HR
Sbjct: 413 NYIHR 417
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 203 bits (495), Expect = 3e-52
Identities = 123/359 (34%), Positives = 208/359 (57%), Gaps = 21/359 (5%)
Query: 80 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 139
FE LK LL G++ GF+ PS IQE ++P LA ++++A++++GTGKTAA+++ +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAG--RDILARAKNGTGKTAAYLVPLL 106
Query: 140 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLK---YAVRGEELPRGSK- 194
R D+ KN Q L L PT ELA+QT ++ ++ K ++ + +++ + L +K
Sbjct: 107 ERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKD 166
Query: 195 ----ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 250
+ H+++ TPG++ D +K + DM K ++ V+DEAD +++ + +I K L
Sbjct: 167 IFVHVVVHVIVATPGRVLDL-MKKKLADMSKCQMLVMDEADKLLS-MDFKKMLEQIIKHL 224
Query: 251 PSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAI 310
P Q++ FSAT+ +V F E + P I L+ +E +L + QYY + + K +
Sbjct: 225 PENRQILLFSATFPISVRDFKEKHLRKPYEINLM-DELTLHGVTQYYAFVEE-KQKVHCL 282
Query: 311 CNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLE 370
++ + I Q+IIFC++ + L+ K+ + G S + ++ R V FR G
Sbjct: 283 NTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHC 342
Query: 371 KVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+ L+ +++ +RGID++ V +V+NFD P + ETYLHRIGR+GRFG G+AINLI
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFP------KNSETYLHRIGRSGRFGHLGVAINLI 395
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 203 bits (495), Expect = 3e-52
Identities = 123/359 (34%), Positives = 208/359 (57%), Gaps = 21/359 (5%)
Query: 80 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 139
FE LK LL G++ GF+ PS IQE ++P LA ++++A++++GTGKTAA+++ +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAG--RDILARAKNGTGKTAAYLVPLL 106
Query: 140 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLK---YAVRGEELPRGSK- 194
R D+ KN Q L L PT ELA+QT ++ ++ K ++ + +++ + L +K
Sbjct: 107 ERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKD 166
Query: 195 ----ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 250
+ H+++ TPG++ D +K + DM K ++ V+DEAD +++ + +I K L
Sbjct: 167 IFVHVVVHVIVATPGRVLDL-MKKKLADMSKCQMLVMDEADKLLS-MDFKKMLEQIIKHL 224
Query: 251 PSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAI 310
P Q++ FSAT+ +V F E + P I L+ +E +L + QYY + + K +
Sbjct: 225 PENRQILLFSATFPISVRDFKEKHLRKPYEINLM-DELTLHGVTQYYAFVEE-KQKVHCL 282
Query: 311 CNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLE 370
++ + I Q+IIFC++ + L+ K+ + G S + ++ R V FR G
Sbjct: 283 NTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHC 342
Query: 371 KVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+ L+ +++ +RGID++ V +V+NFD P + ETYLHRIGR+GRFG G+AINLI
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFP------KNSETYLHRIGRSGRFGHLGVAINLI 395
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 161 bits (392), Expect = 8e-40
Identities = 117/406 (28%), Positives = 210/406 (51%), Gaps = 28/406 (6%)
Query: 36 VPDTPNAADTSLLMKIIRQGLVESKLD-IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVY 94
VP TP + + I+QG+ K D IE+ N+P+ + +FE +L L V
Sbjct: 669 VPPTPTEDEEEMFRSTIQQGINFEKYDQIEVLVSG-NNPVRHINSFEEANLYEAFLNNVR 727
Query: 95 AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVD---------SN 145
+ P+ +Q+ ++P ++A ++++A +Q+G+GKTAAF+L +++ + S
Sbjct: 728 KAQYKKPTPVQKYSIPIVIAG--RDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSE 785
Query: 146 KNYPQVLCLSPTYELAIQTGEVAAKMAK--FCPEIKLKYAVRGEELPRGSKITDHILIGT 203
PQ +C++PT ELA Q A K A + V R + ++L+GT
Sbjct: 786 TQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGT 845
Query: 204 PGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL----PSTCQMMFF 259
PG++ D+ ++ G + ++ +LDEAD M++ G + RI + + S Q + F
Sbjct: 846 PGRLTDF-IEKGKVSLKGLQFLILDEADRMLD-MGFEPAIRRIVESMGMPDKSERQTLMF 903
Query: 260 SATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITI 319
SAT+ + + A +++ + + + R + +I+Q ++ E + R + I G
Sbjct: 904 SATFPEEIQRLAGDFLNDYLFLTVGRVGGTTSDIEQTVIEVTDNEKRDR-LTQILGDAGT 962
Query: 320 GQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVL 379
+ ++F ++++A +L+ +S +G + G+ ++R LD FR G VLI TNV
Sbjct: 963 DRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVA 1022
Query: 380 SRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIA 425
+RG+D++ V V+NFD+P +D + Y+HRIGRTGR G G A
Sbjct: 1023 ARGLDIDDVKHVINFDLP------SDIDEYVHRIGRTGRIGNKGKA 1062
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 139 bits (337), Expect = 4e-33
Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 21/358 (5%)
Query: 79 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 138
+F L L L+ AMG P++IQ +P +L ++ I +++G+GKTAAF L +
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQG--RDCIGCAKTGSGKTAAFALPI 65
Query: 139 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV--RGEELPRGSKIT 196
L ++ + + L+PT ELA Q + + + I LK AV G ++ + +
Sbjct: 66 LQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGR---PIGLKEAVIVGGLDMMKQALSL 122
Query: 197 ---DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 253
H++I TPG++ D ++ KI+ VLDEAD +++ D + I +P
Sbjct: 123 ANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKV-IFDAVPEK 181
Query: 254 CQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKS-AEDKYRAICN 312
Q + FSAT + + ++ S P + + ++ + Q Y+ + D Y + +
Sbjct: 182 RQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAELDQRYLLTPAHVRDCY--LVH 239
Query: 313 IYGVITIGQAII-FCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEK 371
+ Q++I F HT K L K G + L L+ +R+A L RF+ G K
Sbjct: 240 LLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIK 299
Query: 372 VLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+L+ T+V SRG+D+ QV LVVN ++P AD + Y+HR+GRT R G+ G+AI+++
Sbjct: 300 ILVATDVASRGLDIPQVELVVNSNIP------ADPKDYIHRVGRTARAGRGGMAISMV 351
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 131 bits (316), Expect = 1e-30
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 32/356 (8%)
Query: 80 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 139
FE + L LL V G+ P+ +Q+ A+P + ++++A +Q+G+GKTAAF++ +L
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIP--IVKGKRDLMACAQTGSGKTAAFLIPIL 934
Query: 140 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHI 199
SR+ Y + P + + + C + A G +L R H+
Sbjct: 935 SRI-----YMEGPPAPPDFSYR--------SLCRPC--VVYGGADIGSQL-RELDRNCHL 978
Query: 200 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI--HKCLPSTC--Q 255
L+ TPG++ D + G + I+ VLDEAD M++ G + Q RI +P T Q
Sbjct: 979 LVATPGRLVDM-MDRGRVGLDSIRFLVLDEADRMLD-MGFEPQIRRIVDQDSMPKTGIRQ 1036
Query: 256 MMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYG 315
+ FSAT+ + A + N I + + + + +NI Q V DK + ++
Sbjct: 1037 TLMFSATFPKEIQMLARDFLENYIFLAVGKVGSTSENITQKVVWVDEF-DKRSFLLDLLN 1095
Query: 316 VITIGQ-AIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLI 374
Q ++F T+K A L ++KDG+ + G+ + +R L FR G +L+
Sbjct: 1096 ASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILV 1155
Query: 375 TTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLID 430
T V +RG+D+ V V+NFD+P D+ E Y+HRIGRTGR G G+A + +
Sbjct: 1156 ATAVAARGLDIPNVKHVINFDLPTDI------EEYVHRIGRTGRVGHTGLATSFFN 1205
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 112 bits (270), Expect = 5e-25
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 6/215 (2%)
Query: 80 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 139
F +L L P LL+G+ GF PS IQ A+P L ++IAQ++SGTGKT F + L
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIP--LGRCGLDLIAQAKSGTGKTCVFSVIAL 72
Query: 140 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI--TD 197
V + N Q++ L+PT E+A+Q +V + + K + G L K +
Sbjct: 73 ENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSC 132
Query: 198 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 257
HI +GTPG++ + ++ +++F+LDEAD +++ + Q Q I LP QMM
Sbjct: 133 HIAVGTPGRV-KYLIEQKYLKTESVRMFILDEADKLLD-ESFQQQINWIFSALPENKQMM 190
Query: 258 FFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDN 292
FSATY + + ++ P +RL + SL +
Sbjct: 191 AFSATYPEVLANHLKKYMTEPTFVRLNAADPSLQD 225
Score = 72.5 bits (170), Expect = 7e-13
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 350 SGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETY 409
+G T +R+ +++ + ++LI+T++ +RGID E V LVVN D+P + ETY
Sbjct: 245 AGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNG------ETY 298
Query: 410 LHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAHFGKKIQLL 452
LHRIGR GRFG G+A+ + + + DIE K++LL
Sbjct: 299 LHRIGRAGRFGTEGMAVTYVANGKEERELRDIERSIDVKMELL 341
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 108 bits (260), Expect = 8e-24
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 41/338 (12%)
Query: 118 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK------NYPQVLCLSPTYELAIQTGEVAAKM 171
+++I Q+++GTGKT +F L ++ ++ K P+VL ++PT ELA Q G +
Sbjct: 111 EDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL 170
Query: 172 AKFCPEIKLKYAVRGEELPRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDE 229
K E+ Y E P+ + I +L+GTPG++ D+ ++ G D+ K+K VLDE
Sbjct: 171 -KSNLEVYCIYGGMPYE-PQENAINSGLDVLVGTPGRILDF-MRQGTLDLSKLKHVVLDE 227
Query: 230 ADVMINRQGHQDQCIRIHKCL-----PSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLL 284
D M++ G + + Q + FSAT + A+ +
Sbjct: 228 VDRMLD-MGFAESVEEVLAASYAEDREDKPQTLLFSATLPPWAVNTAKKYMK-------- 278
Query: 285 REEESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGH 344
++ + +D I +K ++ Y C +G + +IF T+K A+ L+ S
Sbjct: 279 KDRKLVDLIGHDKLKTSTSVQVY---CGAHG-----RTMIFAQTKKEANELALN-SVLKQ 329
Query: 345 SVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKA 404
VL G++ +QR L FR G + L+ T+V +RG+D+ ++ LVV + P D+
Sbjct: 330 ETQVLHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDV---- 385
Query: 405 DCETYLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIE 442
+ Y+HR GRTGR G+ GI I + PQ + +E
Sbjct: 386 --DAYIHRSGRTGRAGREGICI-VFYKPQQEGLLQPVE 420
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 107 bits (258), Expect = 1e-23
Identities = 91/339 (26%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 90 LKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF---VLAMLSRVD-SN 145
L+G+ MGF ++IQ ++ LL ++++ +++G+GKT AF V+ +L ++
Sbjct: 584 LQGIKDMGFTTMTEIQHKSIAPLLKG--RDLLGAAKTGSGKTLAFLVPVVELLYKLQFKT 641
Query: 146 KNYPQVLCLSPTYELAIQTGEVAAKMAK---FCPEIKLKYAVRGEELPRGSKITDHILIG 202
+N V+ +SPT EL++QT VA + K F I + R E R K + +LI
Sbjct: 642 RNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVN-LLIA 700
Query: 203 TPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSAT 262
TPG++ D F ++ V+DEAD ++ G +++ +I + LPS Q + FSAT
Sbjct: 701 TPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEI-GFEEEMRQIIRILPSKRQTVLFSAT 759
Query: 263 YGTAVMQFAEIIVS-NPIIIRL--LREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITI 319
V A++ + +P+ + + +E +++ ++Q Y+ S E ++ +
Sbjct: 760 QTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPS-EKRFLVLFTFLKKNRS 818
Query: 320 GQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVL 379
+ ++F + + + SE ++ V + G+ ++R F +L+ T+V
Sbjct: 819 KKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVA 878
Query: 380 SRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGR 418
+RG+D+ +V +V +D P D D + Y+HR+GRT R
Sbjct: 879 ARGLDIPEVDWIVQYD-PAD-----DPKEYIHRVGRTAR 911
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 95.9 bits (228), Expect = 6e-20
Identities = 100/393 (25%), Positives = 176/393 (44%), Gaps = 36/393 (9%)
Query: 60 KLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQN 119
K I I+ +D P +++F L+L P L + F P+ IQ +L +++ ++
Sbjct: 57 KNGIHIEGEDCPKP---IESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSG--RD 111
Query: 120 MIAQSQSGTGKTAAFVL--AMLSRVDSNKN---YPQVLCLSPTYELAIQTGEVAAKMAKF 174
+I +++G+GKT A+ L ML R + N P L L+PT EL Q ++M
Sbjct: 112 IIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDV 171
Query: 175 --CPEIK-----------LKYAVRGEELP--RGSKITDHILIGTPGKMFDWGVKFGMFDM 219
CP ++ R + + G ++ + G + D+
Sbjct: 172 IRCPGNPGPSNQSVIYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLDL 231
Query: 220 GKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC---QMMFFSATYGTAVMQFAEIIVS 276
KI V+DE D M+ G ++Q +I T Q + +SAT ++ + A V
Sbjct: 232 YKITYLVMDEPDRMLG-MGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVL 290
Query: 277 NPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLS 336
NPI I++ +++Q V + K + + I+F + + +++
Sbjct: 291 NPITIQVGPGGLIAPSVQQNVVFLYHYQ-KPQKLLETLRTTPYPPVIVFTSSIQNVDYVT 349
Query: 337 EKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDM 396
E + ++ + L E + R ++ FR G +L+ T+V SRG+D +VT V+N+D+
Sbjct: 350 ELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDL 409
Query: 397 PMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
P + E Y+HR GRTGR G GIA + +
Sbjct: 410 PDTI------ECYIHRCGRTGRIGHHGIATSFL 436
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 95.5 bits (227), Expect = 8e-20
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 8/175 (4%)
Query: 289 SLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAV 348
+L ++QYYVK K E K R + ++ ++ Q IIF + + + LS + K
Sbjct: 306 TLHGLQQYYVKLKDNE-KNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAIC 364
Query: 349 LSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCET 408
+ + E+R+A +F+ +++L+ TN+ RG+D+E+V +V N+DMP D +T
Sbjct: 365 IHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMP------EDSDT 418
Query: 409 YLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAHFGKKI-QLLDIEDAEEIEK 462
YLHR+ R GRFG G+AI + + +++ F + +L D D +E+
Sbjct: 419 YLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVGELPDEIDMSYVEQ 473
Score = 80.2 bits (189), Expect = 3e-15
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 67 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 124
+KD S+ + F LKP LL+ + GF PS++Q +P + ++I Q+
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDIICQA 91
Query: 125 QSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 184
+SG GKTA FVLA L +++ VL + T ELA Q + + K+ IK+
Sbjct: 92 KSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFF 151
Query: 185 RGEELPRGSKI----TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 236
G + + + HI++GTPG++ + ++ K F+LDE D M+ +
Sbjct: 152 GGINIKKDQQTLKTNCPHIVVGTPGRILAL-TREKTLNLKHAKHFILDECDKMLEQ 206
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 81.0 bits (191), Expect = 2e-15
Identities = 81/330 (24%), Positives = 151/330 (45%), Gaps = 34/330 (10%)
Query: 62 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 121
D+E + K+ S V+ F + L G+ GF P+ IQ+ +P L+ ++++
Sbjct: 36 DLEDRCKEIGSS--EVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSG--RDVL 91
Query: 122 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQ----VLCLSPTYELAIQTGEVAAKMAKFCPE 177
+++G+GKT AF++ ++ + K L +SPT ELA QT EV K+ +
Sbjct: 92 GAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNK-HD 150
Query: 178 IKLKYAVRGEELPRGSK--ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 235
+ + G++L K + +I++ TPG++ + FD +++ VLDEAD +++
Sbjct: 151 LSAGLIIGGKDLKNEQKRIMKTNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILD 210
Query: 236 RQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQ 295
G I + LPS Q + +SAT +V A + + Q
Sbjct: 211 -MGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSL-------------------Q 250
Query: 296 YYVKCKSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSE--KMSKDGHSVAVLSGEL 353
YV C+ DK + + + ++F + K ++ E + + G + L G+
Sbjct: 251 SYVVCE-LPDKLNFLFSFIRNHLKSKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQ 309
Query: 354 TVEQRIAVLDRFRVGLEKVLITTNVLSRGI 383
+R+A+ D F + VL T++ +RG+
Sbjct: 310 KQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 80.2 bits (189), Expect = 3e-15
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 67 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 124
+KD S+ + F LKP LL+ + GF PS++Q +P + ++I Q+
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDIICQA 91
Query: 125 QSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 184
+SG GKTA FVLA L +++ VL + T ELA Q + + K+ IK+
Sbjct: 92 KSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFF 151
Query: 185 RGEELPRGSKI----TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 236
G + + + HI++GTPG++ + ++ K F+LDE D M+ +
Sbjct: 152 GGINIKKDQQTLKTNCPHIVVGTPGRILAL-TREKTLNLKHAKHFILDECDKMLEQ 206
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 79.8 bits (188), Expect = 4e-15
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 13/272 (4%)
Query: 150 QVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEELPRGSKITDH--ILIGTPGK 206
+ + +SPT ELA Q +AK C I + G+K + IL+ TP +
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNR 266
Query: 207 MFDWGVKFGM-FDMGKIKVFVLDEADVMIN--RQGHQDQCIRIHK-CLPSTCQMMFFSAT 262
+ + ++ ++ +LDEAD + + G ++Q I++ C FSAT
Sbjct: 267 LVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSAT 326
Query: 263 YGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQYYVKCKSAEDKYRAICNIYGVITIGQA 322
+ ++A + + N + + + + + Q + K A+ +I
Sbjct: 327 LSNGIEEWAGLHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAVRDIVQKGFTPPV 386
Query: 323 IIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRG 382
+IF ++ A L ++ DG +V V+ + T QR ++ FR G VLI T ++ RG
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRG 446
Query: 383 IDVEQVTLVVNFDMPMDMNRKADCETYLHRIG 414
ID + V LV+N+D P Y+HRIG
Sbjct: 447 IDFKGVNLVINYDFP------TSAVAYIHRIG 472
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 79.8 bits (188), Expect = 4e-15
Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 23/210 (10%)
Query: 77 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 136
+ +F L L+ + G+ P+ +Q+ ALP ++A ++++A +Q+G+GKTAA++L
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAG--RDLMACAQTGSGKTAAYML 535
Query: 137 AMLSR-----VDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP- 190
+L+ +++ P LC++PT ELA Q A K + P IK+ G +P
Sbjct: 536 PVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTP-IKVCVCYGGVSVPY 594
Query: 191 RGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHK 248
+ S++ H L+GTPG++ D+ + ++ +G I+ +LDEAD M++ D IHK
Sbjct: 595 QASQLERGCHFLVGTPGRLQDFVSREKIY-LGSIQHLILDEADRMLDLGFGPD----IHK 649
Query: 249 CL-------PSTCQMMFFSATYGTAVMQFA 271
+ + Q + FSAT+ + A
Sbjct: 650 LIEESNMTAKESRQTLMFSATFPDEIQHLA 679
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 74.9 bits (176), Expect = 1e-13
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 343 GHSVAVLSGELTVEQ--RIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDM 400
G V + G+ +EQ R LD F+ GL ++LI T+V SRG+D++ +T V+N+D P +
Sbjct: 64 GEKVLIFVGKKVLEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHI 123
Query: 401 NRKADCETYLHRIGRTGRFGKAGIAINLI 429
E Y+HR+GRTGR G++G ++ I
Sbjct: 124 ------EDYVHRVGRTGRAGRSGTSLTFI 146
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 74.5 bits (175), Expect = 2e-13
Identities = 89/321 (27%), Positives = 146/321 (45%), Gaps = 45/321 (14%)
Query: 149 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-----HILIGT 203
P VL L PT ELA Q EVA + K C KL+ P+G +I + I I T
Sbjct: 133 PIVLVLCPTRELAQQVQEVAYSVGKHC---KLRSTCIYGGAPKGPQIRELERGVEICIAT 189
Query: 204 PGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATY 263
PG++ D ++ ++ + VLDEAD M++ G + Q I + Q + +SAT+
Sbjct: 190 PGRLIDM-LESRKTNLRRCTYLVLDEADRMLD-MGFEPQIRTIIDQIRPDRQTLMWSATW 247
Query: 264 GTAVMQFAEIIVSNPIIIRLLREEESLDN-IKQYYVKCKSAEDKYRAICNIYGVITIG-- 320
V A +S+ + I + + ++ I Q C+ E ++ I G++ +
Sbjct: 248 PKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIGGIVILSSL 307
Query: 321 QAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLS 380
Q +IF T++ A L+ K+ DG + QR R+ V + V+
Sbjct: 308 QTLIFTETKRRADELTRKLRSDGCGI----------QR----PRY------VSVDMAVVI 347
Query: 381 RGIDVEQVTLVVNFDMPMDMNRKADC-ETYLHRIGRTGRFGKAGIAINLI---DSPQAME 436
D+ + V+NFD P +C E Y+HRIGRT R + G + ++ QA E
Sbjct: 348 MVADISDIKFVINFDFP-------NCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKE 400
Query: 437 ICTDI-EAHFGKKIQLLDIED 456
+ + + EA +LL+++D
Sbjct: 401 LVSVLQEAKQHVNPKLLNLQD 421
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 66.5 bits (155), Expect = 4e-11
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 359 IAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGR 418
+A +F+ +++L+ TN+ RG+D+E+V +V N+DMP D +TYLHR+ R GR
Sbjct: 2 LARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGR 55
Query: 419 FGKAGIAINLIDSPQAMEICTDIEAHF 445
FG G+AI + + +++ F
Sbjct: 56 FGTKGLAITFVSDEADAKTLNEVQDRF 82
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 65.3 bits (152), Expect = 1e-10
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 349 LSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCET 408
L G EQR L + G + +L+ T+V RGID++ V+ V+N+DM + E
Sbjct: 314 LHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTI------ED 367
Query: 409 YLHRIGRTGRFGKAGIAINLI 429
Y HRIGRTGR GK GIA++ +
Sbjct: 368 YTHRIGRTGRAGKTGIAVSFL 388
Score = 46.4 bits (105), Expect = 5e-05
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 62 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 121
D I K P + ++ ++ + ++L+ V +G+ P+ IQ A+P L + +++I
Sbjct: 86 DFNISTKGGRIP-FPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQN--RDII 142
Query: 122 AQSQSGTGKTAAFVLAML---------SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 172
+++G+GKTAAF + +L R + P L L+PT ELA Q E K
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
Query: 173 K 173
+
Sbjct: 203 R 203
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 62.5 bits (145), Expect = 7e-10
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 378 VLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+ +RGID++ V +V+NFD P + ETYLHRIGR+GRFG G+AINLI
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNS------ETYLHRIGRSGRFGHLGVAINLI 47
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 62.5 bits (145), Expect = 7e-10
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 378 VLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+ +RGID++ V +V+NFD P + ETYLHRIGR+GRFG G+AINLI
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNS------ETYLHRIGRSGRFGHLGVAINLI 47
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 59.3 bits (137), Expect = 6e-09
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 250 LPSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQ-------YYVKCKS 302
LP + FSAT V + NP+ + + + N+++ +Y+ C+S
Sbjct: 14 LPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRTPSTLQNFYLICRS 73
Query: 303 AEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAVLS--GELTVEQRIA 360
E K+ + + ++F T ++ S+ ++K +V +++ G++ R
Sbjct: 74 HE-KFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALHGKMK-SNRHK 131
Query: 361 VLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFG 420
+ D FR +L+ T+V++RG+D+ +V V+ +D P N ++HR GRT R G
Sbjct: 132 IFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSAN------AFVHRCGRTARIG 185
Query: 421 KAGIAI 426
G A+
Sbjct: 186 NEGNAV 191
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 56.8 bits (131), Expect = 3e-08
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 118 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 177
+++I +++G+GKT AF L +L + N L L+PT ELA Q E +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGI-G 60
Query: 178 IKLKYAVRGEELPRGSKI---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 234
+K V G ++ + + HI+I TPG++ D F + +K V+DEAD ++
Sbjct: 61 VKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRIL 120
Query: 235 NRQGHQDQCI 244
N ++ I
Sbjct: 121 NMDFEKEDYI 130
Score = 37.9 bits (84), Expect = 0.017
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 322 AIIFCHTRKTASWLSEKMSKDGHSV----AVLSGELTVEQRIAVLDR---FRVGLEKVLI 374
A+I TR+ A +SE+ G + AV+ G + + + +L + + LI
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94
Query: 375 TTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDSPQA 434
++G + + +V + +N + E Y+HR+GRT R G++G ++ + +
Sbjct: 95 DHLENTKGFSLRTLKYLVMDEADRILNMDFEKEDYIHRVGRTARAGRSGRSVTFV-TQYD 153
Query: 435 MEICTDIEAHFGKKI 449
+E+ IE KK+
Sbjct: 154 VELYQRIEHLIAKKL 168
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 55.2 bits (127), Expect = 1e-07
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 74 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAA 133
L + +E L + P++L+ + GF+ P+ IQ ++P L +++I +++G+GKT A
Sbjct: 126 LIDMPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYH-RDIIGAAETGSGKTLA 184
Query: 134 FVLAMLSRVDSNKN------------------YPQV-LCLSPTYELAIQTGEVAAKMAKF 174
F + ++ +++ K YP + L ++PT ELA+Q + K AK+
Sbjct: 185 FGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKY 244
Query: 175 CPEIKLKYAVRGEELPRGSKI---TDHILIGTPGKMFDWGVKFGMFDMGK 221
+K+ V G P+ ++ I++ TPG++ W + +F GK
Sbjct: 245 -TSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL--WELISQVFTHGK 291
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 320 GQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVL 379
G+ ++F +T L+ + + L + QR+ LDRF+ +L+ T+V
Sbjct: 457 GRTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVA 516
Query: 380 SRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLI 429
+RG+D+ + V+++ +P D E Y+HR GRT R G+++ L+
Sbjct: 517 ARGLDIANIEHVIHYQVPKDP------EVYVHRSGRTARASHEGLSVVLV 560
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 53.2 bits (122), Expect = 4e-07
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 321 QAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLS 380
Q +IF + + E + G + G+ + E+R+ + F G + VL+ T+V S
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 381 RGIDVEQVTLVVNFDMPMDM 400
+G+D + V+NFDMP D+
Sbjct: 149 KGLDFPDIQHVINFDMPEDI 168
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 53.2 bits (122), Expect = 4e-07
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 321 QAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLS 380
Q +IF + + E + G + G+ + E+R+ + F G + VL+ T+V S
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 381 RGIDVEQVTLVVNFDMPMDM 400
+G+D + V+NFDMP D+
Sbjct: 149 KGLDFPDIQHVINFDMPEDI 168
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 51.6 bits (118), Expect = 1e-06
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 80 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 139
F + P L++ + MG P IQE ALP++ + ++++ +S++GTGK+ F+L +
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSH--KSLLIKSETGTGKSLVFLLPSV 219
Query: 140 SRVDSNKNYPQVLCLSPTYELAIQ-TGEVA------AKMAKFCPEIKLKYAVRGEELPRG 192
D + Y ++ + PT ELA Q EV+ + +A F + L R E+L +
Sbjct: 220 Q--DPGRGYGTIIVV-PTRELASQMLYEVSRLLGDKSIVASFVSGVDLS---RQEKLLKD 273
Query: 193 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 231
S I+IGTP ++++ V+ + K V+DE D
Sbjct: 274 SLHPPRIVIGTPKRLWEI-VQEHEHLFQRTKRIVIDEVD 311
Score = 45.6 bits (103), Expect = 9e-05
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 301 KSAEDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIA 360
K+ K + + IY A++F H + ++ G + A L ++ +
Sbjct: 407 KTVPSKAQVLAKIYESSNQKSALVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTK 466
Query: 361 V---LDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTG 417
L FR G ++L+ T RG+D +++ V ++P ++ E YLH GR G
Sbjct: 467 YHKFLRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNV------EEYLHLCGRVG 520
Query: 418 RFGKAGIAINLID 430
R G+ G A ++D
Sbjct: 521 RQGRPGTATTVVD 533
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 50.4 bits (115), Expect = 3e-06
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 57 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 116
+ K+ I++ P P S F ++ + + + P++IQ ALP L+
Sbjct: 499 LRKKMGIKVSGAMPARPCIS---FAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSG- 554
Query: 117 PQNMIAQSQSGTGKTAAFVL-AMLSRVDSNK----NYPQVLCLSPTYELAIQTGEVAAKM 171
+++I +++G+GKTAAF+ A++ +D + + P VL +PT EL Q A +
Sbjct: 555 -RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRF 613
Query: 172 AKFCPEIKLKYAVRGEELPRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDE 229
K + G + + + + I++ TPG++ D VK ++ ++ V DE
Sbjct: 614 GKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLID-HVKAKATNLHRVTYLVFDE 672
Query: 230 ADVMIN 235
AD M +
Sbjct: 673 ADRMFD 678
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 363 DRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGR 418
++F+ +L+ T++ SRG+D V+ V+NFD P N D Y+HR+GRTGR
Sbjct: 740 EKFQNKTADILVCTDIASRGLDTSDVSHVINFDFP---NSMVD---YIHRVGRTGR 789
Score = 47.6 bits (108), Expect = 2e-05
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 77 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 136
V +F L L+ ++LK + A+ + P+ IQ +P ++ ++I +Q+G+GKT A++
Sbjct: 377 VYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHR--HHVICAAQTGSGKTLAYLA 434
Query: 137 AMLSRVDSNKNYPQVLC--LSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 194
++ R+ ++ +L P + + E+A ++ K + R L G K
Sbjct: 435 PLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRK 494
Query: 195 ---ITD------HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 235
+ D +L+ TPG + + K +F + V+DEAD M +
Sbjct: 495 QKWMRDDLESPVDLLVATPGTLLKYRQKDRLF-FSDLTHLVIDEADTMFD 543
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 46.8 bits (106), Expect = 4e-05
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 91 KGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV---DSNKN 147
+ V +GF P+ IQ + +P L +++ A + +GTGKTAAF+L +L R+ +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMG--KDVCACAATGTGKTAAFMLPILERLLYRPTQSP 80
Query: 148 YPQVLCLSPTYELAIQ 163
+VL ++PT ELAIQ
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 36 VPDTPNAADTSLLMKIIRQGLVESKLD-IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVY 94
VP TP + + I+QG+ K D IE+ N+P+ + +FE +L L V
Sbjct: 92 VPPTPTEDEEEMFRSTIQQGINFEKYDQIEVLVSG-NNPVRHINSFEEANLYEAFLNNVR 150
Query: 95 AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 131
+ P+ +Q+ ++P ++A ++++A +Q+G+GKT
Sbjct: 151 KAQYKKPTPVQKYSIPIVIAG--RDVMACAQTGSGKT 185
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 372 VLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDS 431
V++ T+V +RGID+ + V+NF P + ++HR+GR R G++G A +L+ +
Sbjct: 528 VMVVTDVAARGIDIPMLDNVINFHFP------PKAKLFVHRVGRVARAGRSGTAYSLVAN 581
Query: 432 PQAM 435
+ +
Sbjct: 582 DETI 585
Score = 44.4 bits (100), Expect = 2e-04
Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 118 QNMIAQSQSGTGKTAAFVLAMLSRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFC 175
++++A +++G+GKTAAF++ M ++ ++ K + L LSPT ELA+QT + ++ +F
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELGRF- 377
Query: 176 PEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 231
+K + G+ ++ TPG+ ++ + + ++ V DEAD
Sbjct: 378 TGLKSSVILGGDS-----------VVATPGRFLHVVMEMEL-KLSSVEYVVFDEAD 421
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 222 IKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPIII 281
+++ VLDEAD M++ G R+ LP+ Q + FSAT+ + AE ++ NP+ I
Sbjct: 4 VEILVLDEADRMLD-MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEI 62
Query: 282 RLLREEESLDNIKQ 295
+ R + D + Q
Sbjct: 63 EVARRNTASDQVLQ 76
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 44.4 bits (100), Expect = 2e-04
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 186 GEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIR 245
G+ LP ++ +++ TPG+M + + D+ + V+DE D M+ + G + Q +
Sbjct: 245 GKLLPSSPEMGVQVIVATPGRMVEI-ISRQAVDLTHVIGCVVDEVDTML-QLGFEQQVQQ 302
Query: 246 IHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPIIIRLLREEESLDNIKQ--YYVKCKSA 303
I + L + Q M FSAT ++ A +++ P+ I +KQ +V+ KS
Sbjct: 303 ILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTKAVKQLILWVEEKSK 362
Query: 304 EDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSK 341
+ + +I A++F ++ A L+E +SK
Sbjct: 363 KKQLFSILKDSRHFN-PPAVVFVESKLGADMLAEAVSK 399
Score = 39.5 bits (88), Expect = 0.006
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 372 VLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDS 431
V+ + L + E V+ V+NFDMP E Y+H+IGR GR G G +I+ I++
Sbjct: 381 VVFVESKLGADMLAEAVSKVINFDMPPTY------EEYVHQIGRAGRLGATGWSISFINN 434
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 320 GQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVL 379
G II+C TR ++ ++S+ G S L ++R V + G V+ T
Sbjct: 249 GSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISF 308
Query: 380 SRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGK 421
G+D V V ++ +P M E Y GR GR G+
Sbjct: 309 GMGVDKGDVRFVAHWSLPQSM------EGYYQESGRAGRDGQ 344
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 343 GHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNR 402
G V L L ++ V+DRF G +VLI+T V+ G+DV T++V MD +R
Sbjct: 92 GLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMV----IMDADR 147
Query: 403 KADCETYLHRI-GRTGRFGKAGIAINLIDSP 432
+ LH++ GR GR G+ + + +P
Sbjct: 148 FG--VSQLHQLRGRIGRGNLPGLCLLVTTAP 176
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 356 EQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDM 400
EQ + +L FR G K+LI+T+VL G+DV LVV FD M++
Sbjct: 605 EQEV-ILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNL 648
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 347 AVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADC 406
A L+G E++ + + + I SRG+D+ VT V+ D D
Sbjct: 76 AFLTGTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFA------TDA 129
Query: 407 ETYLHRIGRTGRFGKAGIAINLI 429
LHR+GRT R G G +N I
Sbjct: 130 AQMLHRVGRTARAGSHGKVVNFI 152
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 199 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP 251
I+ GTPGK+ D+ + + ++K F+LDEAD ++ QG+ D ++I+ +P
Sbjct: 138 IVTGTPGKLNDF-ITTDKISLHQVKFFILDEADGLL-AQGNNDLIMKIYNKIP 188
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 38.7 bits (86), Expect = 0.010
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 323 IIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRG 382
++F T+ A L + G + L G LT QR+ L +F+ G +L+ T++ +RG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 383 IDVEQVTLVVNFDMPMDMNRKA 404
+D+ V + + + RKA
Sbjct: 72 LDITGVKNSKSVTLVGEKERKA 93
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 344 HSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRK 403
H+VA LT ++R + FR G +VL+ T+ L G+++ +++ P R
Sbjct: 555 HAVAFHHAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNLPARRVIIR--TPTFHGRM 612
Query: 404 ADCETYLHRIGRTGRFGKAGIAINLI 429
D Y GR GR G + +L+
Sbjct: 613 VDPLVYKQMAGRAGRKGVDALGESLL 638
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 353 LTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHR 412
L+ ++++ V+ RFR+G L++T V G+D+ V L+V FD R + R
Sbjct: 564 LSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIR------LVQR 617
Query: 413 IGRTGR 418
+GRTGR
Sbjct: 618 MGRTGR 623
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 38.3 bits (85), Expect = 0.013
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 152 LCLSPTYELAIQTGEVAAKMAKFCPEIKLK----YAVRG-----EELPRGSKITDHILIG 202
+ ++PT ELAIQ + + KFC L+ Y G EL RG++I ++
Sbjct: 148 IVMTPTRELAIQ---IHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEI----IVC 200
Query: 203 TPGKMFDWGVKFG--MFDMGKIKVFVLDEADVMINRQGHQDQC--------IRIHKCLPS 252
TPG+M D + + + VLDEAD M + G + Q +RI C+
Sbjct: 201 TPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFD-MGFEPQITKIRYPKVMRIIDCIRP 259
Query: 253 TCQMMFFSATYGTAVMQFAEIIVSNPIIIRL 283
Q + FSAT+ + A I+ PI I++
Sbjct: 260 DRQTVMFSATFPRQMEALARKILDKPIEIQV 290
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 37.9 bits (84), Expect = 0.017
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 353 LTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHR 412
++ QR V RF G + + T G+D V +++++MP E+Y+
Sbjct: 822 MSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSF------ESYVQE 875
Query: 413 IGRTGRFGKAGIAINLIDSPQAMEIC 438
IGR GR GK +D + ++C
Sbjct: 876 IGRAGRDGKPSHCHVFLDR-EGQDLC 900
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 36.7 bits (81), Expect = 0.040
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 321 QAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVG--LEKVLITTNV 378
+ +IF + L + ++ G+ L G VEQR ++DRF + +++T
Sbjct: 1440 RVLIFTQMTRMLDVLEKFLNYHGYVYLRLDGSTRVEQRQILMDRFNADSRIFCFILSTRS 1499
Query: 379 LSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRT 416
G+++ VV +D + A + HRIG+T
Sbjct: 1500 GGLGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 1537
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 35.9 bits (79), Expect = 0.069
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 351 GELTVEQRIAVLDRFRVGLE-KVLITTNVLSRGIDVEQVTLVVNFDM 396
G +T ++ V+ +FR G E ++I T V G+D++ + V+ +DM
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDM 643
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 35.5 bits (78), Expect = 0.092
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 323 IIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKV--LITTNVLS 380
+IF K L + G+ + L G + VE R +D F EK L++T
Sbjct: 1217 LIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASDPEKFIFLLSTRAGG 1276
Query: 381 RGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRT 416
G+++ V+ +D + + HRIG+T
Sbjct: 1277 LGLNLSAADTVIIYDSDWNPQSDLQAQDRCHRIGQT 1312
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 34.7 bits (76), Expect = 0.16
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 149 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPG 205
PQ L LSPT ELA Q +V + + ++ + G + + D HI+ GTPG
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDIRKLDYGQHIVSGTPG 62
Query: 206 KMF 208
++F
Sbjct: 63 RVF 65
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 33.9 bits (74), Expect = 0.28
Identities = 10/43 (23%), Positives = 28/43 (65%)
Query: 353 LTVEQRIAVLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFD 395
++ +++ +++ F+ G+ +LI T+V G+D++ + V+ +D
Sbjct: 982 MSQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYD 1024
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 33.5 bits (73), Expect = 0.37
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 18/170 (10%)
Query: 287 EESLDNIKQYYVKCKSAEDKYRAICNIYGVITIG--QAIIFCHTRKTAS--------WLS 336
++++ I +Y A++ ++ + N G + II+C T K S L
Sbjct: 134 KKNITYIVKYLSNSMDAKESFKWLVNEINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLI 193
Query: 337 EKMSKDGHSVAVLSGELTVEQRIAVLDRFRV--GLEKVLITTNVLSRGIDVEQVTLVVNF 394
E ++ + +L E + A+L+ F+ G +VL+ T GID + V ++F
Sbjct: 194 ELVANGKPKLEMLHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHF 253
Query: 395 DMPMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAH 444
+CE ++ GR GR K+ + L + DI+ +
Sbjct: 254 ------GPSKNCEAFIQETGRAGRDWKSSFSYLLYKGIMLNHVERDIKEY 297
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 33.1 bits (72), Expect = 0.49
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 361 VLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMD 399
VL FR +L+ T+V+ G+DV + VV FD P +
Sbjct: 136 VLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQN 174
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 33.1 bits (72), Expect = 0.49
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 218 DMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQ 255
D IK+ VLDEAD M+N+ G ++Q +++ LP Q
Sbjct: 32 DTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQ 68
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 33.1 bits (72), Expect = 0.49
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 289 SLDNIKQYYVKCKSAEDKYRAICNIYGVITIG--QAIIFCHTRKTAS--------WLSEK 338
+L I +Y A++ + + N G + II+C T K S L E
Sbjct: 167 TLPYIVKYLSNSMDAKESFEWLVNKINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLIEL 226
Query: 339 MSKDGHSVAVLSGELTVEQRIAVLDRFRV--GLEKVLITTNVLSRGIDVEQVTLVVNFDM 396
++ + +L E + A+L+ F+ G +VL+ T GID + V ++F
Sbjct: 227 VANGKPKLEMLHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHF-- 284
Query: 397 PMDMNRKADCETYLHRIGRTGRFGKAGIAINLIDSPQAMEICTDIEAH 444
+CE ++ G GR GK+ + L + DI+ +
Sbjct: 285 ----GPSKNCEAFIQETGHAGRDGKSSFSYLLYKGIMLNHVERDIKEY 328
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 32.3 bits (70), Expect = 0.85
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 323 IIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVLSRG 382
II+C +RK A ++ +MS G A ++ E R +V++ T G
Sbjct: 317 IIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESR-----------SQVVVATVAFGMG 365
Query: 383 IDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFGKAGIAI 426
ID V V++ M E Y GR GR K I
Sbjct: 366 IDKSNVRFVIHHSFSKSM------ENYYQESGRAGRDEKRASCI 403
>SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)
Length = 100
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 320 GQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKVLITTNVL 379
G II+C TR ++ ++S+ G S L ++R V + G V+ T
Sbjct: 31 GSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISF 90
Query: 380 SRGID 384
G+D
Sbjct: 91 GMGVD 95
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 7 QKAEELEI--SNKVAGLGLDKKHNQETDSDDVPDTPNAADTSLLMKIIRQGLVESKLDIE 64
Q+ E +E S + LG + + S+ PD PN D + + ++ +V S+ I+
Sbjct: 1341 QERERIEQRKSQSIRDLGDHRYSARRRRSEQTPDRPNGPDATPSPRSVKP-VVRSERRIK 1399
Query: 65 IQRKDPNSPLYSVKTFEALHLKPN 88
+ + P+S + K KPN
Sbjct: 1400 LSQSGPSSEMTEQKAQTLPRCKPN 1423
>SB_24445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 127 GTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAI 162
G + +A LS+VDSNK YP ++ + P +AI
Sbjct: 241 GIVSSYGLAIAFLSQVDSNKPYPALVSIVPCCTVAI 276
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 321 QAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQRIAVLDRFRVGLEKV---LITTN 377
+ +IF + L + + G+ + G + R +DRF + L++T
Sbjct: 979 RVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTR 1038
Query: 378 VLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRIGRTGRFG 420
GI++ V +D + + + HRIG+ + G
Sbjct: 1039 AGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVG 1081
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 29.5 bits (63), Expect = 6.0
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 12 LEISNKVAGLGLDKKHNQ---ETDSDDVPDTPNA-ADTSLLMKIIRQGLVES 59
LEI N V GL L+K N+ E D D+V +T + S+L ++ L++S
Sbjct: 472 LEIFNAVLGLRLEKSKNESRDEMDWDEVEETRHVIRSASVLPDVLSHALLQS 523
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 361 VLDRFRVGLEKVLITTNVLSRGIDVEQVTLVVN 393
V DR +G+ K++I TN+ I ++ V VV+
Sbjct: 201 VFDRPPLGVRKIVIATNIAETSITIDDVVFVVD 233
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 116 PPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 175
PP+ ++ SGTGKT M++R +N+ C++ L+ GE A++ +
Sbjct: 289 PPRGILLYGPSGTGKT------MIARAVANETGVHFFCINGPEVLSRYYGETEARLREIF 342
Query: 176 PEIKLK 181
E + K
Sbjct: 343 TEAQNK 348
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 29.1 bits (62), Expect = 8.0
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 356 EQRIAVLDRFRV--GLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNRKADCETYLHRI 413
E + A+L+ F+ G +VL+ T G D + V ++F +CE ++
Sbjct: 357 ENKDAILESFKRLDGHVQVLVATIAFGMGRDCKGVHRTIHF------GPSKNCEAFIQET 410
Query: 414 GRTGRFGKAGIAINLIDSPQAMEICTDIEAH 444
GR GR G + + L + DI+ +
Sbjct: 411 GRAGRDGMSSFSYLLYKGIMLNHVERDIKEY 441
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,778,156
Number of Sequences: 59808
Number of extensions: 592648
Number of successful extensions: 1588
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 85
length of query: 465
length of database: 16,821,457
effective HSP length: 85
effective length of query: 380
effective length of database: 11,737,777
effective search space: 4460355260
effective search space used: 4460355260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -