GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001221-TA|BGIBMGA001221-PA|IPR008530|Protein of unknown
function DUF812
         (135 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   3.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   3.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   5.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   5.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   6.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 106 SNKISEEMEKIWVPHCCKPNEQQKGI 131
           S K++EE  K  +     P+EQQ GI
Sbjct: 356 SQKVAEERHKTDINITTVPSEQQWGI 381


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 47  FCKDLGYKNDVGYQTFLYYNEAELRQVFMFLIERLPN 83
           F  DL  +     Q  +Y NEAE  ++ + +I   P+
Sbjct: 450 FICDLIEQKVKNIQMLVYQNEAEEVKILLDVINHFPH 486


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 110 SEEMEKIWVPHCCKPNEQQ 128
           SE ++ IWVP     NE+Q
Sbjct: 116 SEFIKNIWVPDTFFVNEKQ 134


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 85  GKQSSVSASLKTNQSTLMKDVSNKISEEMEKIW 117
           G Q++    +    S L  D   +ISEE+  IW
Sbjct: 238 GMQTTNEKEIFERLSALPVDKLLQISEEVANIW 270


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 85  GKQSSVSASLKTNQSTLMKDVSNKISEEMEKIW 117
           G Q++    +    S L  D   +ISEE+  IW
Sbjct: 236 GMQTTNEKEIFERLSVLPVDKLLQISEEVANIW 268


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 85  GKQSSVSASLKTNQSTLMKDVSNKISEEMEKIW 117
           G Q++    +    S L  D   +ISEE+  IW
Sbjct: 238 GMQTTNEKEIFERLSILPVDEFLQISEEVANIW 270


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,990
Number of Sequences: 317
Number of extensions: 1049
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 135
length of database: 114,650
effective HSP length: 51
effective length of query: 84
effective length of database: 98,483
effective search space:  8272572
effective search space used:  8272572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)