Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001221-TA|BGIBMGA001221-PA|IPR008530|Protein of unknown
function DUF812
(135 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17127| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 9e-20
SB_58031| Best HMM Match : DB (HMM E-Value=1.5) 29 1.3
SB_10749| Best HMM Match : DB (HMM E-Value=1.5) 29 1.3
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 28 3.0
SB_54465| Best HMM Match : PufQ (HMM E-Value=1.6) 27 5.3
SB_22028| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 27 7.0
SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_36802| Best HMM Match : Pkinase (HMM E-Value=2.2e-23) 26 9.3
SB_35948| Best HMM Match : DUF156 (HMM E-Value=4.9) 26 9.3
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 26 9.3
SB_19415| Best HMM Match : LON (HMM E-Value=4.4) 26 9.3
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 26 9.3
SB_15944| Best HMM Match : Response_reg (HMM E-Value=3.2e-06) 26 9.3
SB_11945| Best HMM Match : EURL (HMM E-Value=9.7) 26 9.3
>SB_17127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 92.7 bits (220), Expect = 9e-20
Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 9 IIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEA 68
I++A+SKCL+ IN + +P LP +S + V +A+ +DLGY+ ++GYQTFLY NE
Sbjct: 34 IVQASSKCLHVINEDIDIPSNLPSSMSAKFRVGTMLAAALQDLGYRGEIGYQTFLYSNEK 93
Query: 69 ELRQVFMFLIERLPNEGKQSSVSAS 93
++R VFMFL+E LP K++S++AS
Sbjct: 94 DIRSVFMFLVEHLP---KETSLAAS 115
>SB_58031| Best HMM Match : DB (HMM E-Value=1.5)
Length = 297
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 3 DVSVEFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCK 49
D+SV +AA CL + +P K+ K+ + H I FCK
Sbjct: 5 DLSVNGSRKAAQHCLGSTHPVAKLKSKIENCLQHCDIPGTSINGFCK 51
>SB_10749| Best HMM Match : DB (HMM E-Value=1.5)
Length = 616
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 3 DVSVEFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCK 49
D+SV +AA CL + +P K+ K+ + H I FCK
Sbjct: 219 DLSVNGSRKAAQHCLGSTHPVAKLKSKIENCLQHCDIPGTSINGFCK 265
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 21 NPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAELRQVFMFLIER 80
+PSL + K+PK +SH +V + S + D Y +Y E ++ LI+
Sbjct: 266 HPSLALAAKIPKALSHVFKVMTNVVSMRPRFDFTAD--YLVRIYRAECVNLRLHCNLIKG 323
Query: 81 -LPNEGKQSSVSASLKTNQS 99
L +G + + AS N S
Sbjct: 324 VLDKQGYSAFLIASFPNNIS 343
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 79 ERLPNEGKQSSVSASLKTNQSTL 101
+ +P + K+ S+S+SLK NQ TL
Sbjct: 2722 QAVPKQSKEFSISSSLKGNQETL 2744
>SB_54465| Best HMM Match : PufQ (HMM E-Value=1.6)
Length = 379
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 104 DVSNKISEEMEKIWVPHCCKP 124
+++N+I+ + K W HCC P
Sbjct: 84 EITNEITSIVGKTWRVHCCSP 104
>SB_22028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 97 NQSTLMKDVSNKISEEMEKIWVPHC 121
N STL+ ++N + + +E +W+P C
Sbjct: 34 NLSTLLHPLNNLLRDGVEWLWLPEC 58
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 87 QSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPHCCKPNEQQ 128
Q+S + TN+S L D + ++E ++ VP +PN ++
Sbjct: 1153 QTSEPHRITTNESMLFDDTNAVLTESLQAQAVPQAPQPNTRE 1194
>SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 53 YKNDVGYQTFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEE 112
+KN Y TF + ++ + Q+ LI L +GK+ S + + +T + + +K S +
Sbjct: 212 FKNTFVYNTFQFPSKLTINQIKCNLIVPLELQGKKCPGEMSEEASATTDTESIKSKKSGD 271
Query: 113 M 113
+
Sbjct: 272 L 272
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 87 QSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPH 120
Q S S +K ++ + SNK + EK+WV H
Sbjct: 289 QRSGSKRMKKKPKSVEEVASNKAWHDAEKVWVVH 322
>SB_36802| Best HMM Match : Pkinase (HMM E-Value=2.2e-23)
Length = 318
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 25 KVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAEL 70
KV K GIS R+ + A I KDL + N VG++ + +L
Sbjct: 60 KVNPKARPGISERLALEASIL---KDLNHPNIVGFRALIGNTNGDL 102
>SB_35948| Best HMM Match : DUF156 (HMM E-Value=4.9)
Length = 92
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 60 QTFLYYNEAELRQVFMFLIERLPNEGK-------QSSVSASLKTNQSTLMK 103
+ F Y E + QVF + +ER EGK ++ +A ++TN++ L++
Sbjct: 7 RVFFIYLELRIFQVFPYPVERKLEEGKPFCRAVLDTTCAADVRTNKTRLIR 57
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 26.2 bits (55), Expect = 9.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 95 KTNQSTLMKDVSNKISEEMEKIWV 118
K++ S + D+S +S E+E++WV
Sbjct: 2431 KSDNSKVTLDLSKPVSSEVEEVWV 2454
>SB_19415| Best HMM Match : LON (HMM E-Value=4.4)
Length = 360
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 1 MCDVSVEFIIEAASKCLNAINPSLKVP 27
M +V VE++I+ ASK L A+ SLK+P
Sbjct: 206 MRNVHVEYVIKKASKRLYALR-SLKIP 231
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 26.2 bits (55), Expect = 9.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 53 YKNDVGYQTFL-YYNEA-ELRQVFMFLIERLPNEGKQSSVSASLKTNQSTL 101
++N G Q L YY EA E Q + + ER NE KQ+ V ++ Q +L
Sbjct: 24 HQNIGGVQRRLGYYEEAMEYYQQALQVFERTGNESKQADVRHNIGVVQQSL 74
>SB_15944| Best HMM Match : Response_reg (HMM E-Value=3.2e-06)
Length = 221
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 69 ELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMK--DVSNKIS 110
++ +V + +++ LP + K S++ +K TL+K + NK+S
Sbjct: 153 QMDEVAIQILKELPKQTKISNLEGVIKKEDGTLLKLRSIENKLS 196
>SB_11945| Best HMM Match : EURL (HMM E-Value=9.7)
Length = 323
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 EAELRQVFMFLIERLPNEGKQSSVSASLKT-NQS 99
+ E RQV ++ P EGK+S +S+ +K+ NQS
Sbjct: 262 DQEARQVIEDILPASPKEGKRSFLSSVVKSFNQS 295
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,026,400
Number of Sequences: 59808
Number of extensions: 133127
Number of successful extensions: 368
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 357
Number of HSP's gapped (non-prelim): 17
length of query: 135
length of database: 16,821,457
effective HSP length: 75
effective length of query: 60
effective length of database: 12,335,857
effective search space: 740151420
effective search space used: 740151420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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