GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001221-TA|BGIBMGA001221-PA|IPR008530|Protein of unknown
function DUF812
         (135 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058359-1|AAL13588.1|  555|Drosophila melanogaster GH12970p pro...    99   1e-21
AE014296-2818|AAF49399.1|  555|Drosophila melanogaster CG9951-PA...    99   1e-21
AY071014-1|AAL48636.1|  117|Drosophila melanogaster RE09259p pro...    27   6.4  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    27   6.4  
AE013599-1247|AAF58686.1|  117|Drosophila melanogaster CG9070-PA...    27   6.4  

>AY058359-1|AAL13588.1|  555|Drosophila melanogaster GH12970p
           protein.
          Length = 555

 Score =   99 bits (238), Expect = 1e-21
 Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 4/123 (3%)

Query: 1   MCDVSVEFIIEAASKCLNAINPSLKVPQKLPKG-ISHRIEVAAQIASFCKDLGYKNDVGY 59
           + D + E ++ A S CL  I P L++P+ LP G ++ R  VA+ +A  CKD GY+ D+GY
Sbjct: 25  LSDFTPEQVVRAVSGCLAEIRPDLQLPRTLPGGAMAQRFGVASSLAQGCKDSGYRGDIGY 84

Query: 60  QTFLYYNEAELRQVFMFLIERLPNE--GKQSSVSAS-LKTNQSTLMKDVSNKISEEMEKI 116
           QTFLY N  ELR++ MFLIE+LP E  G +   S S   +++  L + +  +++++++  
Sbjct: 85  QTFLYPNAVELRRLLMFLIEQLPRERQGTEDGASKSQTLSHRQLLERKIRKELAQQLKTP 144

Query: 117 WVP 119
           WVP
Sbjct: 145 WVP 147


>AE014296-2818|AAF49399.1|  555|Drosophila melanogaster CG9951-PA
           protein.
          Length = 555

 Score =   99 bits (238), Expect = 1e-21
 Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 4/123 (3%)

Query: 1   MCDVSVEFIIEAASKCLNAINPSLKVPQKLPKG-ISHRIEVAAQIASFCKDLGYKNDVGY 59
           + D + E ++ A S CL  I P L++P+ LP G ++ R  VA+ +A  CKD GY+ D+GY
Sbjct: 25  LSDFTPEQVVRAVSGCLAEIRPDLQLPRTLPGGAMAQRFGVASSLAQGCKDSGYRGDIGY 84

Query: 60  QTFLYYNEAELRQVFMFLIERLPNE--GKQSSVSAS-LKTNQSTLMKDVSNKISEEMEKI 116
           QTFLY N  ELR++ MFLIE+LP E  G +   S S   +++  L + +  +++++++  
Sbjct: 85  QTFLYPNAVELRRLLMFLIEQLPRERQGTEDGASKSQTLSHRQLLERKIRKELAQQLKTP 144

Query: 117 WVP 119
           WVP
Sbjct: 145 WVP 147


>AY071014-1|AAL48636.1|  117|Drosophila melanogaster RE09259p
           protein.
          Length = 117

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 4   VSVEFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAA 42
           VS+++I +A    + + NP L  P  +P+ I   +E  A
Sbjct: 73  VSIQYIADANGYQVVSANPPLPTPPPIPEAIQRSLEYIA 111


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 9    IIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCKDLG 52
            II + +K +  ++P+  VP   PK +S  I+   ++ S   D+G
Sbjct: 2725 IINSKTKPIEKLDPTETVPVSPPKSVSVDIDTETKMESTVTDVG 2768


>AE013599-1247|AAF58686.1|  117|Drosophila melanogaster CG9070-PA
           protein.
          Length = 117

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 4   VSVEFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAA 42
           VS+++I +A    + + NP L  P  +P+ I   +E  A
Sbjct: 73  VSIQYIADANGYQVVSANPPLPTPPPIPEAIQRSLEYIA 111


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,998,087
Number of Sequences: 52641
Number of extensions: 204463
Number of successful extensions: 589
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 582
Number of HSP's gapped (non-prelim): 5
length of query: 135
length of database: 24,830,863
effective HSP length: 78
effective length of query: 57
effective length of database: 20,724,865
effective search space: 1181317305
effective search space used: 1181317305
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)