Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001221-TA|BGIBMGA001221-PA|IPR008530|Protein of unknown
function DUF812
(135 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 29 1.5
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 29 1.5
AF099926-2|AAK73894.1| 247|Caenorhabditis elegans Hypothetical ... 29 1.5
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 2.0
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 27 3.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 4.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 4.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 4.6
AF025451-5|AAB71202.2| 208|Caenorhabditis elegans Hypothetical ... 26 8.1
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 26 8.1
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 26 8.1
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 97 NQSTLMKDVSNKISEEMEKIWVPHCCKPNEQQKGITS 133
+QST + V+ KI+E + + VP+ K N+ KG +S
Sbjct: 118 DQSTCTQQVAQKITEIAKDLSVPYPKKLNQHYKGFSS 154
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 28.7 bits (61), Expect = 1.5
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 25 KVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAELRQ---VFMFLIERL 81
+VP+K K I IE +A ++ K+ + + F Y E Q F F+ +++
Sbjct: 20 EVPEKAKKAIVE-IERLDILAKKEMEVAKKHKIEF--FANYEEMTAEQKTKAFTFMQKKM 76
Query: 82 PNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEK 115
+ S + + L+KDV K EE +K
Sbjct: 77 AKVSEYSDQKIEIASGLKVLLKDVYGKFMEEEQK 110
>AF099926-2|AAK73894.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 28.7 bits (61), Expect = 1.5
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 25 KVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAELRQ---VFMFLIERL 81
+VP+K K I IE +A ++ K+ + + F Y E Q F F+ +++
Sbjct: 20 EVPEKAKKAIVE-IERLDILAKKEMEVAKKHKIEF--FANYEEMTAEQKTKAFTFMQKKM 76
Query: 82 PNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEK 115
+ S + + L+KDV K EE +K
Sbjct: 77 AKVSEYSDQKIEIASGLKVLLKDVYGKFMEEEQK 110
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 82 PNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEK 115
P+ G+Q + K T +KD NK++E++ K
Sbjct: 244 PDNGEQEKIKKEKKKGTETSLKDGKNKLNEKIVK 277
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 104 DVSNKISEEMEKIWVPHCCKPNEQQKGITSS 134
+++ K+S+ +KIW P C N + I SS
Sbjct: 85 NITLKVSDFRKKIWTPDTCIINSKSSSIHSS 115
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 83 NEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKI 116
+EG ++ VSA +K LM S+ + E+MEKI
Sbjct: 2174 SEGIKTEVSA-IKAEVEKLMNSTSSGVQEDMEKI 2206
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 83 NEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKI 116
+EG ++ VSA +K LM S+ + E+MEKI
Sbjct: 2174 SEGIKTEVSA-IKAEVEKLMNSTSSGVQEDMEKI 2206
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 83 NEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKI 116
+EG ++ VSA +K LM S+ + E+MEKI
Sbjct: 2174 SEGIKTEVSA-IKAEVEKLMNSTSSGVQEDMEKI 2206
>AF025451-5|AAB71202.2| 208|Caenorhabditis elegans Hypothetical
protein C24H12.6 protein.
Length = 208
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 62 FLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISE 111
+L+Y + +R+ LI+R + K + + +++ ++ L++D+ KISE
Sbjct: 46 YLHYVDNPIRR----LIDRYRRKNKNNDLESNVVATKAKLIEDIKLKISE 91
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 26.2 bits (55), Expect = 8.1
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 24 LKVPQKLPKGISHRIEVAAQIASFCKDL-GYKNDVG-YQTFLYYNEAELRQVFMF-LIER 80
+++P S R E A+Q+A L ++ +V + + N+ +LR + + E+
Sbjct: 611 IEIPATEMSNESQRNEHASQLAELLHSLTSFETNVETVRGSVLANQKKLRMSEVEDMTEK 670
Query: 81 LPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKI 116
L N G+ ++A+LKT+ + + +I +ME++
Sbjct: 671 LTNIGR---LAANLKTDFPPIQMAIEQQIKRDMERV 703
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 26.2 bits (55), Expect = 8.1
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 24 LKVPQKLPKGISHRIEVAAQIASFCKDL-GYKNDVG-YQTFLYYNEAELRQVFMF-LIER 80
+++P S R E A+Q+A L ++ +V + + N+ +LR + + E+
Sbjct: 510 IEIPATEMSNESQRNEHASQLAELLHSLTSFETNVETVRGSVLANQKKLRMSEVEDMTEK 569
Query: 81 LPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKI 116
L N G+ ++A+LKT+ + + +I +ME++
Sbjct: 570 LTNIGR---LAANLKTDFPPIQMAIEQQIKRDMERV 602
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,073,319
Number of Sequences: 27539
Number of extensions: 105471
Number of successful extensions: 310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 307
Number of HSP's gapped (non-prelim): 11
length of query: 135
length of database: 12,573,161
effective HSP length: 74
effective length of query: 61
effective length of database: 10,535,275
effective search space: 642651775
effective search space used: 642651775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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