Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001221-TA|BGIBMGA001221-PA|IPR008530|Protein of unknown
function DUF812
(135 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55830.1 68414.m06402 expressed protein similar to M-type 9 p... 45 2e-05
At1g22460.1 68414.m02807 expressed protein similar to axi 1 [Nic... 29 0.82
At5g37220.1 68418.m04470 zinc finger (C3HC4-type RING finger) fa... 28 2.5
At5g11330.1 68418.m01323 monooxygenase family protein low simila... 28 2.5
At3g20960.1 68416.m02649 cytochrome P450 family protein similar ... 27 3.3
At5g13600.1 68418.m01574 phototropic-responsive NPH3 family prot... 27 4.4
At4g37100.1 68417.m05255 hypothetical protein 27 5.8
At4g30230.1 68417.m04299 hypothetical protein 27 5.8
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 27 5.8
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 27 5.8
At5g55530.3 68418.m06918 C2 domain-containing protein low simila... 26 7.6
At5g55530.2 68418.m06917 C2 domain-containing protein low simila... 26 7.6
At5g55530.1 68418.m06916 C2 domain-containing protein low simila... 26 7.6
At5g45650.1 68418.m05613 subtilase family protein contains Pfam ... 26 7.6
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 26 7.6
At4g37080.2 68417.m05252 expressed protein contains Pfam profile... 26 7.6
At4g37080.1 68417.m05253 expressed protein contains Pfam profile... 26 7.6
At4g35270.1 68417.m05012 RWP-RK domain-containing protein simila... 26 7.6
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 26 7.6
>At1g55830.1 68414.m06402 expressed protein similar to M-type 9
protein (GI:507127) [Streptococcus pyogenes]
Length = 509
Score = 45.2 bits (102), Expect = 2e-05
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 7 EFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQT----- 61
E ++ ++ LN I+PS +LP + R + IA K+LGY ND+ Y
Sbjct: 33 EALVSICAQLLNLIDPSASFSDELPDSLPERFRICTDIAHSVKNLGYINDMSYYKEQAFI 92
Query: 62 -----------FLYYNEAELRQVFMFLIERLP--NEGKQSSVSASLKTN-QSTLMKDVSN 107
FL+ +E + ++ FL+ERL +EG+++ + + + + +D+S+
Sbjct: 93 VPESCDSPLVFFLHPSEDDSYRLVRFLVERLSEISEGRKTLTAGDIASRPKMETFRDISD 152
Query: 108 --KISEEMEKIWVPHCCKPNEQQKGIT 132
++E+ ++ + H K K +T
Sbjct: 153 DMMVNEDKDETFDMHIQKVEAVLKDLT 179
>At1g22460.1 68414.m02807 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 565
Score = 29.5 bits (63), Expect = 0.82
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 17 LNAINPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYKNDV 57
+NA++ ++V +KLPKGI +V S+ Y+N++
Sbjct: 220 INALSKDIRVIKKLPKGIDGLTKVVKHFKSYSGLSYYQNEI 260
>At5g37220.1 68418.m04470 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 214
Score = 27.9 bits (59), Expect = 2.5
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 31 PKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAELRQVF-MFLIERLPNEGKQSS 89
P ISH ++ + FC+DLG K + + Y + L +F MF++ L E +
Sbjct: 68 PLYISHLLQQSISHTRFCQDLGEK--IAHNC-AYLSGLPL--IFEMFVVVELTQEVLITL 122
Query: 90 VSASLKTNQSTLMKDVSNKISEEME 114
SAS+ DV ++ EE +
Sbjct: 123 PSASVAVPSKAASSDVLQRLVEEQK 147
>At5g11330.1 68418.m01323 monooxygenase family protein low
similarity to 2,6-dihydroxypyridine 3-hydroxylase (DHPH)
[GI:14495302] [Arthrobacter nicotinovorans]; contains
Pfam profile PF01360: Monooxygenase
Length = 408
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 94 LKTNQSTLM--KDVSNKISEEMEKIWVPHCCKPNEQQK 129
LK+N TL +++ NK+ +E E IW+P + + K
Sbjct: 252 LKSNSVTLKVSQEMINKMHQEAETIWIPELARLMSETK 289
>At3g20960.1 68416.m02649 cytochrome P450 family protein similar to
Cytochrome P450 93A1 (SP:Q42798) {Glycine max};
Length = 418
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 104 DVSNKISEEMEKIWVPHCCKPNEQQK 129
DVSN+ +E +EKI V H K +E+ K
Sbjct: 147 DVSNRFNELLEKILVEHNEKLDEEHK 172
>At5g13600.1 68418.m01574 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000; contains
BTB/POZ domain, Pfam:PF00651
Length = 591
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 59 YQTFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEK 115
Y +YY+ E R + ++E LP + +S L+ +++++ S E +EK
Sbjct: 271 YGDDMYYSHEEQRSLLEEIVELLPGKKCVTSTKFLLRLLRTSMVLHASQVTQETLEK 327
>At4g37100.1 68417.m05255 hypothetical protein
Length = 896
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 65 YNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPHCCKP 124
+ E E V + + +E + S S + QS L D NKI+ + IW+ + K
Sbjct: 479 FEETESVSVGELMKSPVFSEDESSDNSFWIDLGQSPLGSDQHNKIASPLPPIWLTNKRKQ 538
Query: 125 NEQQ 128
++Q
Sbjct: 539 KQRQ 542
>At4g30230.1 68417.m04299 hypothetical protein
Length = 260
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 21 NPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYK 54
N +L+ P KLPK H +E + A +DL K
Sbjct: 6 NTNLQNPTKLPKPFQHHLEEEKEDALSLRDLPLK 39
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 73 VFMFLIERLPNEGKQSSVSASLKT---NQSTLM-KDVSNKISEEMEKIWVPH 120
VF+ I L + +S L+ +++ LM DVS+K+SE + KI + H
Sbjct: 964 VFVQSISELSTASPRDQISGELRAQLFDEAALMIPDVSHKVSEIVAKIMLEH 1015
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 26.6 bits (56), Expect = 5.8
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 45 ASFCKDLGYKNDVGYQTF----LYYNE--AELRQVFMFLIERLPNEGKQSSVSASLKTNQ 98
A + D+GY+ +G + F +Y N+ L V I+ P + +++ + +
Sbjct: 274 APYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGG 333
Query: 99 STLMKDVSNKISEEMEKI 116
ST+ KD ++ +++KI
Sbjct: 334 STMFKDFGRRLQRDLKKI 351
>At5g55530.3 68418.m06918 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 61 TFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPH 120
T LY++ A Q+ + P+ S+ +S+ +++T + S + E++KI P
Sbjct: 162 TDLYHSPAGFVQLSLSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPD 221
Query: 121 CCKPNEQQKGIT 132
NE +K ++
Sbjct: 222 PNVANENEKMVS 233
>At5g55530.2 68418.m06917 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 61 TFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPH 120
T LY++ A Q+ + P+ S+ +S+ +++T + S + E++KI P
Sbjct: 162 TDLYHSPAGFVQLSLSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPD 221
Query: 121 CCKPNEQQKGIT 132
NE +K ++
Sbjct: 222 PNVANENEKMVS 233
>At5g55530.1 68418.m06916 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 61 TFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPH 120
T LY++ A Q+ + P+ S+ +S+ +++T + S + E++KI P
Sbjct: 162 TDLYHSPAGFVQLSLSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPD 221
Query: 121 CCKPNEQQKGIT 132
NE +K ++
Sbjct: 222 PNVANENEKMVS 233
>At5g45650.1 68418.m05613 subtilase family protein contains Pfam
domain, PF00082: Subtilase family; contains Pfam domain,
PF02225: protease associated (PA) domain
Length = 791
Score = 26.2 bits (55), Expect = 7.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 8 FIIEAASKCLNAINPSLKVPQKLPKGISH 36
+++ S + I+P+ K P K+P G +H
Sbjct: 658 YLLYGCSVNITNIDPTFKCPSKIPPGYNH 686
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 77 LIERLPNEGKQSSVSASL-KTNQSTLMKDVSNKISEEMEKIWVP 119
+I R+ + QS V A L K Q L +DV+N++ + IWVP
Sbjct: 180 MISRMRKD-TQSLVHAPLPKPEQERLERDVANELVYKGFDIWVP 222
>At4g37080.2 68417.m05252 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 610
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 77 LIERLPNEGK-QSSVSASLKTNQSTLMKDVSNKISEEMEKIWV 118
L +RL ++ K Q SVS S +++ +V+N++SE++ K V
Sbjct: 290 LDDRLADQDKAQESVSGSSSEDKTLQSGNVANRVSEDLLKCLV 332
>At4g37080.1 68417.m05253 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 597
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 77 LIERLPNEGK-QSSVSASLKTNQSTLMKDVSNKISEEMEKIWV 118
L +RL ++ K Q SVS S +++ +V+N++SE++ K V
Sbjct: 277 LDDRLADQDKAQESVSGSSSEDKTLQSGNVANRVSEDLLKCLV 319
>At4g35270.1 68417.m05012 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 974
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 108 KISEEMEKIWVPHCCKPNEQQKGITSS 134
+IS+E + W+ H K NE+ KG++ S
Sbjct: 553 EISQE-DSSWISHMIKANEKGKGVSLS 578
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 82 PNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPHCCKPNEQQK 129
P G+QSS S + K+N ++ D S E +K HC P K
Sbjct: 137 PENGEQSSSSQNSKSNIRSVSSDTS--YEEHAKKASGSHCNTPQRLGK 182
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,920,490
Number of Sequences: 28952
Number of extensions: 102135
Number of successful extensions: 367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 357
Number of HSP's gapped (non-prelim): 19
length of query: 135
length of database: 12,070,560
effective HSP length: 74
effective length of query: 61
effective length of database: 9,928,112
effective search space: 605614832
effective search space used: 605614832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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